RNA–Protein interactions for RNA: ENST00000527836.5

SCN3B-204, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-204ENST00000527836 TRAV8-4A0A0B4J246 113 aa8.06□□□□□ -1.12
SCN3B-204ENST00000527836 GATCO43716 136 aaKnown RBP8.06□□□□□ -1.12
SCN3B-204ENST00000527836 PRSS1P07477 247 aa8.06□□□□□ -1.12
SCN3B-204ENST00000527836 CLRN3Q8NCR9 226 aa8.06□□□□□ -1.12
SCN3B-204ENST00000527836 BORCS7Q96B45 105 aa8.06□□□□□ -1.12
SCN3B-204ENST00000527836 PGLYRP4Q96LB8 373 aa8.06□□□□□ -1.12
SCN3B-204ENST00000527836 AP5S1Q9NUS5 200 aa8.06□□□□□ -1.12
SCN3B-204ENST00000527836 A0A1B0GUV1 79 aa8.05□□□□□ -1.12
SCN3B-204ENST00000527836 hDV102S1A0JD36 115 aa8.05□□□□□ -1.12
SCN3B-204ENST00000527836 TMEM250H0YL14 139 aa8.05□□□□□ -1.12
SCN3B-204ENST00000527836 K7EN84 100 aa8.05□□□□□ -1.12
SCN3B-204ENST00000527836 AMMECR1LQ6DCA0 310 aa8.05□□□□□ -1.12
SCN3B-204ENST00000527836 TEX261Q6UWH6 196 aa8.05□□□□□ -1.12
SCN3B-204ENST00000527836 Q6ZNX1 250 aa8.05□□□□□ -1.12
SCN3B-204ENST00000527836 C20orf203Q8NBC4 194 aa8.05□□□□□ -1.12
SCN3B-204ENST00000527836 IGLV4-60A0A075B6I1 120 aa8.04□□□□□ -1.12
SCN3B-204ENST00000527836 TRAV26-2A0A0B4J265 109 aa8.04□□□□□ -1.12
SCN3B-204ENST00000527836 IGKV3OR2-268A0A0C4DH90 116 aa8.04□□□□□ -1.12
SCN3B-204ENST00000527836 A8MWL6 223 aa8.04□□□□□ -1.12
SCN3B-204ENST00000527836 GATD1Q8NB37 220 aa8.04□□□□□ -1.12
SCN3B-204ENST00000527836 DPH3Q96FX2 82 aa8.04□□□□□ -1.12
SCN3B-204ENST00000527836 CNFNQ9BYD5 112 aa8.04□□□□□ -1.12
SCN3B-204ENST00000527836 EIF5A2Q9GZV4 153 aaKnown RBP8.04□□□□□ -1.12
SCN3B-204ENST00000527836 HERC1Q15751 4861 aa8.04□□□□□ -1.12
SCN3B-204ENST00000527836 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.03□□□□□ -1.12
SCN3B-204ENST00000527836 RNASEKQ6P5S7 137 aaKnown RBP8.03□□□□□ -1.12
SCN3B-204ENST00000527836 C9orf163Q8N9P6 203 aa8.03□□□□□ -1.12
SCN3B-204ENST00000527836 MYCBP2O75592 4640 aa8.03□□□□□ -1.12
SCN3B-204ENST00000527836 APCSP02743 223 aa8.02□□□□□ -1.13
SCN3B-204ENST00000527836 KRTAP26-1Q6PEX3 210 aa8.02□□□□□ -1.13
SCN3B-204ENST00000527836 GTSF1Q8WW33 167 aa8.02□□□□□ -1.13
SCN3B-204ENST00000527836 RPL39LQ96EH5 51 aaKnown RBP8.02□□□□□ -1.13
SCN3B-204ENST00000527836 SMIM7Q9BQ49 75 aa8.02□□□□□ -1.13
SCN3B-204ENST00000527836 DNAH8Q96JB1 4490 aa8.01□□□□□ -1.13
SCN3B-204ENST00000527836 NCR2O95944 276 aa8.01□□□□□ -1.13
SCN3B-204ENST00000527836 PMCHP20382 165 aa8.01□□□□□ -1.13
SCN3B-204ENST00000527836 RPL37AP61513 92 aaKnown RBP8.01□□□□□ -1.13
SCN3B-204ENST00000527836 CFAP161Q6P656 301 aa8.01□□□□□ -1.13
SCN3B-204ENST00000527836 FAM231DQ6ZW35 169 aa8.01□□□□□ -1.13
SCN3B-204ENST00000527836 GFRA4Q9GZZ7 299 aa8.01□□□□□ -1.13
SCN3B-204ENST00000527836 IGHV3-64A0A075B6Q5 118 aa8□□□□□ -1.13
SCN3B-204ENST00000527836 GAGE12HA6NDE8 117 aa8□□□□□ -1.13
SCN3B-204ENST00000527836 SDHAF1A6NFY7 115 aa8□□□□□ -1.13
SCN3B-204ENST00000527836 ZNF727A8MUV8 499 aa8□□□□□ -1.13
SCN3B-204ENST00000527836 BTF3L4Q96K17 158 aa8□□□□□ -1.13
SCN3B-204ENST00000527836 H7C423 109 aa7.99□□□□□ -1.13
SCN3B-204ENST00000527836 I3L3M4 83 aa7.99□□□□□ -1.13
SCN3B-204ENST00000527836 FOXA3P55318 350 aaPredicted RBP7.99□□□□□ -1.13
SCN3B-204ENST00000527836 CT83Q5H943 113 aa7.99□□□□□ -1.13
SCN3B-204ENST00000527836 TMEM101Q96IK0 257 aa7.99□□□□□ -1.13
SCN3B-204ENST00000527836 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.98□□□□□ -1.13
SCN3B-204ENST00000527836 A0A1B0GUT8 65 aa7.98□□□□□ -1.13
SCN3B-204ENST00000527836 IGKV2-29A2NJV5 120 aaPredicted RBP7.98□□□□□ -1.13
SCN3B-204ENST00000527836 KRTAP29-1A8MX34 341 aaPredicted RBP7.98□□□□□ -1.13
SCN3B-204ENST00000527836 CNBPP62633 177 aaKnown RBP7.98□□□□□ -1.13
SCN3B-204ENST00000527836 SDIM1Q6ZPB5 146 aa7.98□□□□□ -1.13
SCN3B-204ENST00000527836 LYPD6BQ8NI32 183 aa7.98□□□□□ -1.13
SCN3B-204ENST00000527836 ST20Q9HBF5 79 aa7.98□□□□□ -1.13
SCN3B-204ENST00000527836 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.98□□□□□ -1.13
SCN3B-204ENST00000527836 HIGD1CA8MV81 97 aa7.97□□□□□ -1.13
SCN3B-204ENST00000527836 FGF6P10767 208 aa7.97□□□□□ -1.13
SCN3B-204ENST00000527836 TSKUQ8WUA8 353 aa7.97□□□□□ -1.13
SCN3B-204ENST00000527836 CHCHD10Q8WYQ3 142 aaPredicted RBP7.97□□□□□ -1.13
SCN3B-204ENST00000527836 ZNF25P17030 456 aaPredicted RBP7.96□□□□□ -1.14
SCN3B-204ENST00000527836 LINC01551Q86U37 167 aa7.96□□□□□ -1.14
SCN3B-204ENST00000527836 OR5A1Q8NGJ0 315 aa7.96□□□□□ -1.14
SCN3B-204ENST00000527836 MRAP2Q96G30 205 aa7.96□□□□□ -1.14
SCN3B-204ENST00000527836 FAM210AQ96ND0 272 aa7.96□□□□□ -1.14
SCN3B-204ENST00000527836 RIGQ13278 110 aa7.95□□□□□ -1.14
SCN3B-204ENST00000527836 HIGD2BQ4VC39 106 aa7.95□□□□□ -1.14
SCN3B-204ENST00000527836 TMEM191AQ9H0A3 160 aa7.95□□□□□ -1.14
SCN3B-204ENST00000527836 OSTCQ9NRP0 149 aa7.95□□□□□ -1.14
SCN3B-204ENST00000527836 TRBV6-5A0A0K0K1A5 114 aa7.94□□□□□ -1.14
SCN3B-204ENST00000527836 FAM231BA6NCW3 169 aa7.94□□□□□ -1.14
SCN3B-204ENST00000527836 PANO1I0J062 215 aa7.94□□□□□ -1.14
SCN3B-204ENST00000527836 NDUFS6O75380 124 aaKnown RBP7.94□□□□□ -1.14
SCN3B-204ENST00000527836 OXTP01178 125 aa7.94□□□□□ -1.14
SCN3B-204ENST00000527836 SRP19P09132 144 aaKnown RBP7.94□□□□□ -1.14
SCN3B-204ENST00000527836 FCER1GP30273 86 aa7.94□□□□□ -1.14
SCN3B-204ENST00000527836 RPS10P46783 165 aaKnown RBP7.94□□□□□ -1.14
SCN3B-204ENST00000527836 XCL1P47992 114 aa7.94□□□□□ -1.14
SCN3B-204ENST00000527836 C15orf56Q8N910 161 aa7.94□□□□□ -1.14
SCN3B-204ENST00000527836 TMEM242Q9NWH2 141 aa7.94□□□□□ -1.14
SCN3B-204ENST00000527836 CHTF8P0CG12 524 aa7.93□□□□□ -1.14
SCN3B-204ENST00000527836 KRTAP10-4P60372 401 aaPredicted RBP7.93□□□□□ -1.14
SCN3B-204ENST00000527836 SS18Q15532 418 aa7.93□□□□□ -1.14
SCN3B-204ENST00000527836 TMEM241Q24JQ0 296 aa7.93□□□□□ -1.14
SCN3B-204ENST00000527836 AMN1Q8IY45 258 aa7.93□□□□□ -1.14
SCN3B-204ENST00000527836 RNF185Q96GF1 192 aa7.93□□□□□ -1.14
SCN3B-204ENST00000527836 A0A087WYN8 130 aa7.92□□□□□ -1.14
SCN3B-204ENST00000527836 C7orf77A4D0Y5 90 aa7.92□□□□□ -1.14
SCN3B-204ENST00000527836 PPP1R17O96001 155 aa7.92□□□□□ -1.14
SCN3B-204ENST00000527836 TSHBP01222 138 aa7.92□□□□□ -1.14
SCN3B-204ENST00000527836 SLPIP03973 132 aa7.92□□□□□ -1.14
SCN3B-204ENST00000527836 RAB4AP20338 218 aa7.92□□□□□ -1.14
SCN3B-204ENST00000527836 COX6A2Q02221 97 aa7.92□□□□□ -1.14
SCN3B-204ENST00000527836 SMAGPQ0VAQ4 97 aa7.92□□□□□ -1.14
SCN3B-204ENST00000527836 ADIRFQ15847 76 aa7.92□□□□□ -1.14
SCN3B-204ENST00000527836 FAM74A3Q4VXF1 159 aa7.92□□□□□ -1.14
SCN3B-204ENST00000527836 NAT8BQ9UHF3 227 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms