RNA–Protein interactions for RNA: ENST00000527612.1

PPFIA1-209, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-209ENST00000527612 PRSS1P07477 247 aa4.4□□□□□ -1.71
PPFIA1-209ENST00000527612 NTF3P20783 257 aa4.4□□□□□ -1.71
PPFIA1-209ENST00000527612 TAGLN2P37802 199 aaKnown RBP4.4□□□□□ -1.71
PPFIA1-209ENST00000527612 GATD1Q8NB37 220 aa4.4□□□□□ -1.71
PPFIA1-209ENST00000527612 OCC1Q8TAD7 63 aa4.4□□□□□ -1.71
PPFIA1-209ENST00000527612 CIRBP-AS1Q8TBR5 109 aa4.4□□□□□ -1.71
PPFIA1-209ENST00000527612 DAZAP1Q96EP5 407 aaKnown RBP4.4□□□□□ -1.71
PPFIA1-209ENST00000527612 IGLV10-54A0A075B6I4 117 aa4.39□□□□□ -1.71
PPFIA1-209ENST00000527612 PANO1I0J062 215 aa4.39□□□□□ -1.71
PPFIA1-209ENST00000527612 FOXA3P55318 350 aaPredicted RBP4.39□□□□□ -1.71
PPFIA1-209ENST00000527612 REG3AQ06141 175 aa4.39□□□□□ -1.71
PPFIA1-209ENST00000527612 C14orf177Q52M58 125 aa4.39□□□□□ -1.71
PPFIA1-209ENST00000527612 WDR73Q6P4I2 378 aa4.39□□□□□ -1.71
PPFIA1-209ENST00000527612 FAM231DQ6ZW35 169 aa4.39□□□□□ -1.71
PPFIA1-209ENST00000527612 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.39□□□□□ -1.71
PPFIA1-209ENST00000527612 DEFB104AQ8WTQ1 72 aa4.39□□□□□ -1.71
PPFIA1-209ENST00000527612 RPL39LQ96EH5 51 aaKnown RBP4.39□□□□□ -1.71
PPFIA1-209ENST00000527612 TMEM243Q9BU79 118 aa4.39□□□□□ -1.71
PPFIA1-209ENST00000527612 NIT2Q9NQR4 276 aa4.39□□□□□ -1.71
PPFIA1-209ENST00000527612 BIN3Q9NQY0 253 aa4.39□□□□□ -1.71
PPFIA1-209ENST00000527612 A0A1B0GUV1 79 aa4.38□□□□□ -1.71
PPFIA1-209ENST00000527612 CNBPP62633 177 aaKnown RBP4.38□□□□□ -1.71
PPFIA1-209ENST00000527612 TWIST1Q15672 202 aa4.38□□□□□ -1.71
PPFIA1-209ENST00000527612 CT83Q5H943 113 aa4.38□□□□□ -1.71
PPFIA1-209ENST00000527612 C15orf56Q8N910 161 aa4.38□□□□□ -1.71
PPFIA1-209ENST00000527612 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.38□□□□□ -1.71
PPFIA1-209ENST00000527612 GAS8-AS1O95177 125 aa4.37□□□□□ -1.71
PPFIA1-209ENST00000527612 PLA2G1BP04054 148 aaKnown RBP4.37□□□□□ -1.71
PPFIA1-209ENST00000527612 AMTP48728 403 aa4.37□□□□□ -1.71
PPFIA1-209ENST00000527612 CIRBPQ14011 172 aaKnown RBP4.37□□□□□ -1.71
PPFIA1-209ENST00000527612 COTL1Q14019 142 aa4.37□□□□□ -1.71
PPFIA1-209ENST00000527612 LINC01551Q86U37 167 aa4.37□□□□□ -1.71
PPFIA1-209ENST00000527612 C9orf163Q8N9P6 203 aa4.37□□□□□ -1.71
PPFIA1-209ENST00000527612 TRAV8-4A0A0B4J246 113 aa4.36□□□□□ -1.71
PPFIA1-209ENST00000527612 TRBV6-5A0A0K0K1A5 114 aa4.36□□□□□ -1.71
PPFIA1-209ENST00000527612 SDHAF1A6NFY7 115 aa4.36□□□□□ -1.71
PPFIA1-209ENST00000527612 KRTAP29-1A8MX34 341 aaPredicted RBP4.36□□□□□ -1.71
PPFIA1-209ENST00000527612 NDUFS6O75380 124 aaKnown RBP4.36□□□□□ -1.71
PPFIA1-209ENST00000527612 SLPIP03973 132 aa4.36□□□□□ -1.71
PPFIA1-209ENST00000527612 HNRNPA3P51991 378 aaKnown RBP4.36□□□□□ -1.71
PPFIA1-209ENST00000527612 BLOC1S1P78537 153 aa4.36□□□□□ -1.71
PPFIA1-209ENST00000527612 DGAT2L7PQ6IED9 249 aa4.36□□□□□ -1.71
PPFIA1-209ENST00000527612 SMIM7Q9BQ49 75 aa4.36□□□□□ -1.71
PPFIA1-209ENST00000527612 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.35□□□□□ -1.71
PPFIA1-209ENST00000527612 IGKV2-29A2NJV5 120 aaPredicted RBP4.35□□□□□ -1.71
PPFIA1-209ENST00000527612 HIGD1CA8MV81 97 aa4.35□□□□□ -1.71
PPFIA1-209ENST00000527612 UBE2L6O14933 153 aa4.35□□□□□ -1.71
PPFIA1-209ENST00000527612 GATCO43716 136 aaKnown RBP4.35□□□□□ -1.71
PPFIA1-209ENST00000527612 NCR2O95944 276 aa4.35□□□□□ -1.71
PPFIA1-209ENST00000527612 TSHBP01222 138 aa4.35□□□□□ -1.71
PPFIA1-209ENST00000527612 SRP19P09132 144 aaKnown RBP4.35□□□□□ -1.71
PPFIA1-209ENST00000527612 RPS10P46783 165 aaKnown RBP4.35□□□□□ -1.71
PPFIA1-209ENST00000527612 CEBPGP53567 150 aa4.35□□□□□ -1.71
PPFIA1-209ENST00000527612 SDIM1Q6ZPB5 146 aa4.35□□□□□ -1.71
PPFIA1-209ENST00000527612 TSKUQ8WUA8 353 aa4.35□□□□□ -1.71
PPFIA1-209ENST00000527612 RNF185Q96GF1 192 aa4.35□□□□□ -1.71
PPFIA1-209ENST00000527612 V9GYV3 84 aa4.35□□□□□ -1.71
PPFIA1-209ENST00000527612 LRP2P98164 4655 aa4.35□□□□□ -1.71
PPFIA1-209ENST00000527612 A0A1B0GUT8 65 aa4.34□□□□□ -1.71
PPFIA1-209ENST00000527612 hDV102S1A0JD36 115 aa4.34□□□□□ -1.71
PPFIA1-209ENST00000527612 FAM231BA6NCW3 169 aa4.34□□□□□ -1.71
PPFIA1-209ENST00000527612 A8MWL6 223 aa4.34□□□□□ -1.71
PPFIA1-209ENST00000527612 C9JQL5 133 aa4.34□□□□□ -1.71
PPFIA1-209ENST00000527612 APCSP02743 223 aa4.34□□□□□ -1.71
PPFIA1-209ENST00000527612 CHTF8P0CG12 524 aa4.34□□□□□ -1.71
PPFIA1-209ENST00000527612 FGF6P10767 208 aa4.34□□□□□ -1.71
PPFIA1-209ENST00000527612 ESDP10768 282 aa4.34□□□□□ -1.71
PPFIA1-209ENST00000527612 CLRN3Q8NCR9 226 aa4.34□□□□□ -1.71
PPFIA1-209ENST00000527612 SPACA4Q8TDM5 124 aa4.34□□□□□ -1.71
PPFIA1-209ENST00000527612 EIF5A2Q9GZV4 153 aaKnown RBP4.34□□□□□ -1.71
PPFIA1-209ENST00000527612 TMEM191AQ9H0A3 160 aa4.34□□□□□ -1.71
PPFIA1-209ENST00000527612 TMEM242Q9NWH2 141 aa4.34□□□□□ -1.71
PPFIA1-209ENST00000527612 GVQW2A0A096LPI5 108 aaPredicted RBP4.33□□□□□ -1.72
PPFIA1-209ENST00000527612 TRBV27A0A0K0K1C4 114 aa4.33□□□□□ -1.72
PPFIA1-209ENST00000527612 GAGE12HA6NDE8 117 aa4.33□□□□□ -1.72
PPFIA1-209ENST00000527612 ZNF727A8MUV8 499 aa4.33□□□□□ -1.72
PPFIA1-209ENST00000527612 H7C423 109 aa4.33□□□□□ -1.72
PPFIA1-209ENST00000527612 ATP6V1G1O75348 118 aa4.33□□□□□ -1.72
PPFIA1-209ENST00000527612 FOXI1Q12951 378 aa4.33□□□□□ -1.72
PPFIA1-209ENST00000527612 TEX261Q6UWH6 196 aa4.33□□□□□ -1.72
PPFIA1-209ENST00000527612 AMN1Q8IY45 258 aa4.33□□□□□ -1.72
PPFIA1-209ENST00000527612 CHCHD10Q8WYQ3 142 aaPredicted RBP4.33□□□□□ -1.72
PPFIA1-209ENST00000527612 ISOC2Q96AB3 205 aa4.33□□□□□ -1.72
PPFIA1-209ENST00000527612 OSTCQ9NRP0 149 aa4.33□□□□□ -1.72
PPFIA1-209ENST00000527612 IGKV3OR2-268A0A0C4DH90 116 aa4.32□□□□□ -1.72
PPFIA1-209ENST00000527612 SMKR1H3BMG3 65 aa4.32□□□□□ -1.72
PPFIA1-209ENST00000527612 I3L3M4 83 aa4.32□□□□□ -1.72
PPFIA1-209ENST00000527612 J3QL48 77 aa4.32□□□□□ -1.72
PPFIA1-209ENST00000527612 ZNF25P17030 456 aaPredicted RBP4.32□□□□□ -1.72
PPFIA1-209ENST00000527612 RAB4AP20338 218 aa4.32□□□□□ -1.72
PPFIA1-209ENST00000527612 POLR2KP53803 58 aaKnown RBP4.32□□□□□ -1.72
PPFIA1-209ENST00000527612 RPL37AP61513 92 aaKnown RBP4.32□□□□□ -1.72
PPFIA1-209ENST00000527612 RPL23P62829 140 aaKnown RBP4.32□□□□□ -1.72
PPFIA1-209ENST00000527612 SRSF3P84103 164 aaKnown RBP4.32□□□□□ -1.72
PPFIA1-209ENST00000527612 HIGD2BQ4VC39 106 aa4.32□□□□□ -1.72
PPFIA1-209ENST00000527612 RNASEKQ6P5S7 137 aaKnown RBP4.32□□□□□ -1.72
PPFIA1-209ENST00000527612 SMIM15Q7Z3B0 74 aa4.32□□□□□ -1.72
PPFIA1-209ENST00000527612 MRPL52Q86TS9 123 aaKnown RBP4.32□□□□□ -1.72
PPFIA1-209ENST00000527612 NRACQ8N912 160 aa4.32□□□□□ -1.72
PPFIA1-209ENST00000527612 NUP35Q8NFH5 326 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms