RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 ATRAIDQ6UW56 229 aa12.68□□□□□ -0.38
PKP3-204ENST00000526971 UBE2WQ96B02 151 aa12.68□□□□□ -0.38
PKP3-204ENST00000526971 GAGE6Q13070 117 aa12.67□□□□□ -0.38
PKP3-204ENST00000526971 RMI2Q96E14 147 aa12.67□□□□□ -0.38
PKP3-204ENST00000526971 RNF185Q96GF1 192 aa12.67□□□□□ -0.38
PKP3-204ENST00000526971 SMR3BP02814 79 aaPredicted RBP12.66□□□□□ -0.38
PKP3-204ENST00000526971 RAB4AP20338 218 aa12.66□□□□□ -0.38
PKP3-204ENST00000526971 HAMPP81172 84 aa12.66□□□□□ -0.38
PKP3-204ENST00000526971 COTL1Q14019 142 aa12.66□□□□□ -0.38
PKP3-204ENST00000526971 Q8N976 141 aa12.66□□□□□ -0.38
PKP3-204ENST00000526971 DEFB104AQ8WTQ1 72 aa12.66□□□□□ -0.38
PKP3-204ENST00000526971 TMEM243Q9BU79 118 aa12.66□□□□□ -0.38
PKP3-204ENST00000526971 COX11Q9Y6N1 276 aa12.66□□□□□ -0.38
PKP3-204ENST00000526971 DNAH8Q96JB1 4490 aa12.66□□□□□ -0.38
PKP3-204ENST00000526971 RBX1P62877 108 aa12.65□□□□□ -0.38
PKP3-204ENST00000526971 Q0VG73 95 aa12.65□□□□□ -0.38
PKP3-204ENST00000526971 AMN1Q8IY45 258 aa12.65□□□□□ -0.38
PKP3-204ENST00000526971 MRAP2Q96G30 205 aa12.65□□□□□ -0.38
PKP3-204ENST00000526971 TRBV6-5A0A0K0K1A5 114 aa12.64□□□□□ -0.39
PKP3-204ENST00000526971 GAS8-AS1O95177 125 aa12.64□□□□□ -0.39
PKP3-204ENST00000526971 ANGP03950 147 aaKnown RBP12.64□□□□□ -0.39
PKP3-204ENST00000526971 PNRC1Q12796 327 aaPredicted RBP12.64□□□□□ -0.39
PKP3-204ENST00000526971 ENHOQ6UWT2 76 aa12.64□□□□□ -0.39
PKP3-204ENST00000526971 IGKV2D-24A0A075B6R9 120 aa12.63□□□□□ -0.39
PKP3-204ENST00000526971 A0A1B0GW15 77 aa12.63□□□□□ -0.39
PKP3-204ENST00000526971 SDHAF1A6NFY7 115 aa12.63□□□□□ -0.39
PKP3-204ENST00000526971 PPP1R2P9O14990 202 aa12.63□□□□□ -0.39
PKP3-204ENST00000526971 AMTP48728 403 aa12.63□□□□□ -0.39
PKP3-204ENST00000526971 NCR2O95944 276 aa12.62□□□□□ -0.39
PKP3-204ENST00000526971 CRPP02741 224 aa12.62□□□□□ -0.39
PKP3-204ENST00000526971 CAMPP49913 170 aa12.62□□□□□ -0.39
PKP3-204ENST00000526971 UQCC3Q6UW78 93 aa12.62□□□□□ -0.39
PKP3-204ENST00000526971 ST20Q9HBF5 79 aa12.62□□□□□ -0.39
PKP3-204ENST00000526971 Q8N814 137 aa12.61□□□□□ -0.39
PKP3-204ENST00000526971 PRR34Q9NV39 138 aa12.61□□□□□ -0.39
PKP3-204ENST00000526971 A0A1B0GUV1 79 aa12.6□□□□□ -0.39
PKP3-204ENST00000526971 UBE2L6O14933 153 aa12.6□□□□□ -0.39
PKP3-204ENST00000526971 GCSHP23434 173 aa12.6□□□□□ -0.39
PKP3-204ENST00000526971 RPS10P46783 165 aaKnown RBP12.6□□□□□ -0.39
PKP3-204ENST00000526971 WFDC2Q14508 124 aa12.6□□□□□ -0.39
PKP3-204ENST00000526971 FAM104BQ5XKR9 115 aa12.6□□□□□ -0.39
PKP3-204ENST00000526971 I3L3M4 83 aa12.59□□□□□ -0.39
PKP3-204ENST00000526971 MT-ND4LP03901 98 aa12.59□□□□□ -0.39
PKP3-204ENST00000526971 PMCHP20382 165 aa12.59□□□□□ -0.39
PKP3-204ENST00000526971 MIAQ16674 131 aa12.59□□□□□ -0.39
PKP3-204ENST00000526971 MRPL54Q6P161 138 aaKnown RBP12.59□□□□□ -0.39
PKP3-204ENST00000526971 LINC00269Q8N2A0 174 aa12.59□□□□□ -0.39
PKP3-204ENST00000526971 NTN5Q8WTR8 489 aaPredicted RBP12.59□□□□□ -0.39
PKP3-204ENST00000526971 BAALCQ8WXS3 180 aa12.59□□□□□ -0.39
PKP3-204ENST00000526971 TMEM70Q9BUB7 260 aa12.59□□□□□ -0.39
PKP3-204ENST00000526971 C1orf43Q9BWL3 253 aa12.59□□□□□ -0.39
PKP3-204ENST00000526971 A0A1B0GXF2 115 aa12.58□□□□□ -0.4
PKP3-204ENST00000526971 SMKR1H3BMG3 65 aa12.58□□□□□ -0.4
PKP3-204ENST00000526971 S100A8P05109 93 aa12.58□□□□□ -0.4
PKP3-204ENST00000526971 POLR2KP53803 58 aaKnown RBP12.58□□□□□ -0.4
PKP3-204ENST00000526971 HBBP68871 147 aa12.58□□□□□ -0.4
PKP3-204ENST00000526971 C20orf203Q8NBC4 194 aa12.58□□□□□ -0.4
PKP3-204ENST00000526971 ANAPC16Q96DE5 110 aa12.58□□□□□ -0.4
PKP3-204ENST00000526971 IGLV4-60A0A075B6I1 120 aa12.57□□□□□ -0.4
PKP3-204ENST00000526971 TMEM218A2RU14 115 aa12.57□□□□□ -0.4
PKP3-204ENST00000526971 LECT2O14960 151 aa12.57□□□□□ -0.4
PKP3-204ENST00000526971 PPP1R17O96001 155 aa12.57□□□□□ -0.4
PKP3-204ENST00000526971 APCSP02743 223 aa12.57□□□□□ -0.4
PKP3-204ENST00000526971 MRPL51Q4U2R6 128 aaKnown RBP12.57□□□□□ -0.4
PKP3-204ENST00000526971 NRACQ8N912 160 aa12.57□□□□□ -0.4
PKP3-204ENST00000526971 IGLV5-52A0A0A0MRZ9 124 aa12.56□□□□□ -0.4
PKP3-204ENST00000526971 TRBV27A0A0K0K1C4 114 aa12.56□□□□□ -0.4
PKP3-204ENST00000526971 F8W036 122 aa12.56□□□□□ -0.4
PKP3-204ENST00000526971 CLPSL2Q6UWE3 100 aa12.56□□□□□ -0.4
PKP3-204ENST00000526971 ATP5L2Q7Z4Y8 100 aa12.56□□□□□ -0.4
PKP3-204ENST00000526971 LINC00862A6NCI5 91 aa12.55□□□□□ -0.4
PKP3-204ENST00000526971 H7C423 109 aa12.55□□□□□ -0.4
PKP3-204ENST00000526971 TSHBP01222 138 aa12.55□□□□□ -0.4
PKP3-204ENST00000526971 ADCYAP1P18509 176 aa12.55□□□□□ -0.4
PKP3-204ENST00000526971 REG3AQ06141 175 aa12.55□□□□□ -0.4
PKP3-204ENST00000526971 TMEM242Q9NWH2 141 aa12.55□□□□□ -0.4
PKP3-204ENST00000526971 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.54□□□□□ -0.4
PKP3-204ENST00000526971 IGKV2-29A2NJV5 120 aaPredicted RBP12.54□□□□□ -0.4
PKP3-204ENST00000526971 VCYO14598 125 aa12.54□□□□□ -0.4
PKP3-204ENST00000526971 COMMD7Q86VX2 200 aa12.54□□□□□ -0.4
PKP3-204ENST00000526971 ESDP10768 282 aa12.53□□□□□ -0.4
PKP3-204ENST00000526971 CKS2P33552 79 aa12.53□□□□□ -0.4
PKP3-204ENST00000526971 SUMO2P61956 95 aaKnown RBP12.53□□□□□ -0.4
PKP3-204ENST00000526971 FAM229AH3BQW9 127 aa12.52□□□□□ -0.41
PKP3-204ENST00000526971 FGF6P10767 208 aa12.52□□□□□ -0.41
PKP3-204ENST00000526971 AMMECR1LQ6DCA0 310 aa12.52□□□□□ -0.41
PKP3-204ENST00000526971 KRTAP26-1Q6PEX3 210 aa12.52□□□□□ -0.41
PKP3-204ENST00000526971 FAM30AQ9NZY2 134 aa12.52□□□□□ -0.41
PKP3-204ENST00000526971 TRBV24-1A0A075B6N3 115 aa12.51□□□□□ -0.41
PKP3-204ENST00000526971 TRAV8-4A0A0B4J246 113 aa12.51□□□□□ -0.41
PKP3-204ENST00000526971 RNASEKQ6P5S7 137 aaKnown RBP12.51□□□□□ -0.41
PKP3-204ENST00000526971 C20orf78Q9BR46 151 aa12.51□□□□□ -0.41
PKP3-204ENST00000526971 SEC11CQ9BY50 192 aa12.51□□□□□ -0.41
PKP3-204ENST00000526971 D6R8Y8 96 aa12.5□□□□□ -0.41
PKP3-204ENST00000526971 HLA-DQA1P01909 254 aa12.5□□□□□ -0.41
PKP3-204ENST00000526971 IGLV10-54A0A075B6I4 117 aa12.49□□□□□ -0.41
PKP3-204ENST00000526971 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.49□□□□□ -0.41
PKP3-204ENST00000526971 TNFRSF6BO95407 300 aa12.49□□□□□ -0.41
PKP3-204ENST00000526971 PPBPP02775 128 aa12.49□□□□□ -0.41
PKP3-204ENST00000526971 ZNF25P17030 456 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms