RNA–Protein interactions for RNA: ENST00000525443.1

LTBP3-204, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 3,162 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-204ENST00000525443 A0A0J9YXV3 536 aa11□□□□□ -0.65
LTBP3-204ENST00000525443 USP17L23D6RBM5 183 aa11□□□□□ -0.65
LTBP3-204ENST00000525443 DAND5Q8N907 189 aa11□□□□□ -0.65
LTBP3-204ENST00000525443 IGHV3OR16-13A0A075B7E8 117 aa11□□□□□ -0.65
LTBP3-204ENST00000525443 IGHV3-74A0A0B4J1X5 117 aa11□□□□□ -0.65
LTBP3-204ENST00000525443 S100A4P26447 101 aaKnown RBP11□□□□□ -0.65
LTBP3-204ENST00000525443 NXPH4O95158 308 aa11□□□□□ -0.65
LTBP3-204ENST00000525443 BAALC-AS2P0C853 105 aa11□□□□□ -0.65
LTBP3-204ENST00000525443 PRR9Q5T870 116 aa11□□□□□ -0.65
LTBP3-204ENST00000525443 C9orf139Q6ZV77 190 aa11□□□□□ -0.65
LTBP3-204ENST00000525443 TIMM17AQ99595 171 aa11□□□□□ -0.65
LTBP3-204ENST00000525443 CFAP46Q8IYW2 2715 aa10.99□□□□□ -0.65
LTBP3-204ENST00000525443 PHLDA3Q9Y5J5 127 aa10.99□□□□□ -0.65
LTBP3-204ENST00000525443 FAM223BA6NKX1 122 aa10.99□□□□□ -0.65
LTBP3-204ENST00000525443 AVPP01185 164 aa10.99□□□□□ -0.65
LTBP3-204ENST00000525443 IGF1P05019 195 aa10.99□□□□□ -0.65
LTBP3-204ENST00000525443 IGHV3-30-3P0DP02 117 aa10.99□□□□□ -0.65
LTBP3-204ENST00000525443 PRORYQ9H606 182 aa10.99□□□□□ -0.65
LTBP3-204ENST00000525443 GNLYP22749 145 aa10.98□□□□□ -0.65
LTBP3-204ENST00000525443 LINC01561Q8N1V8 128 aa10.98□□□□□ -0.65
LTBP3-204ENST00000525443 A0A0J9YX75 114 aa10.98□□□□□ -0.65
LTBP3-204ENST00000525443 NDPQ00604 133 aa10.98□□□□□ -0.65
LTBP3-204ENST00000525443 A8MZ25 164 aa10.97□□□□□ -0.65
LTBP3-204ENST00000525443 F8W735 103 aaPredicted RBP10.97□□□□□ -0.65
LTBP3-204ENST00000525443 BUB1B-PAK6H3BSN5 160 aa10.97□□□□□ -0.65
LTBP3-204ENST00000525443 C22orf24Q9Y442 160 aa10.97□□□□□ -0.65
LTBP3-204ENST00000525443 A0A1W2PPR1 153 aa10.97□□□□□ -0.65
LTBP3-204ENST00000525443 FAM208BQ5VWN6 2430 aa10.97□□□□□ -0.65
LTBP3-204ENST00000525443 SVEP1Q4LDE5 3571 aa10.97□□□□□ -0.65
LTBP3-204ENST00000525443 IGLV1-47P01700 117 aa10.96□□□□□ -0.65
LTBP3-204ENST00000525443 MIAQ16674 131 aa10.96□□□□□ -0.65
LTBP3-204ENST00000525443 TMEM243Q9BU79 118 aa10.96□□□□□ -0.65
LTBP3-204ENST00000525443 IGHV1-3A0A0C4DH29 117 aa10.96□□□□□ -0.66
LTBP3-204ENST00000525443 C1orf195Q5TG92 126 aa10.96□□□□□ -0.66
LTBP3-204ENST00000525443 C9orf47Q6ZRZ4 202 aa10.96□□□□□ -0.66
LTBP3-204ENST00000525443 FLNCQ14315 2725 aa10.95□□□□□ -0.66
LTBP3-204ENST00000525443 C16orf92Q96LL3 132 aa10.95□□□□□ -0.66
LTBP3-204ENST00000525443 IGHV3-49A0A0A0MS15 119 aa10.94□□□□□ -0.66
LTBP3-204ENST00000525443 POLR2KP53803 58 aaKnown RBP10.94□□□□□ -0.66
LTBP3-204ENST00000525443 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.94□□□□□ -0.66
LTBP3-204ENST00000525443 NDUFA12Q9UI09 145 aa10.94□□□□□ -0.66
LTBP3-204ENST00000525443 C11orf71Q6IPW1 123 aa10.93□□□□□ -0.66
LTBP3-204ENST00000525443 ZFAND3Q9H8U3 227 aa10.93□□□□□ -0.66
LTBP3-204ENST00000525443 IGSF10Q6WRI0 2623 aa10.93□□□□□ -0.66
LTBP3-204ENST00000525443 COX7A2LO14548 114 aa10.93□□□□□ -0.66
LTBP3-204ENST00000525443 BRK1Q8WUW1 75 aa10.93□□□□□ -0.66
LTBP3-204ENST00000525443 MUC4Q99102 2169 aa10.93□□□□□ -0.66
LTBP3-204ENST00000525443 F5H697 171 aa10.93□□□□□ -0.66
LTBP3-204ENST00000525443 VCYO14598 125 aa10.93□□□□□ -0.66
LTBP3-204ENST00000525443 ITLN2Q8WWU7 325 aaPredicted RBP10.93□□□□□ -0.66
LTBP3-204ENST00000525443 USP9XQ93008 2570 aaPredicted RBP10.93□□□□□ -0.66
LTBP3-204ENST00000525443 PPP1R17O96001 155 aa10.92□□□□□ -0.66
LTBP3-204ENST00000525443 C20orf197Q8N268 126 aa10.92□□□□□ -0.66
LTBP3-204ENST00000525443 FANCD2OSQ96PS1 177 aa10.92□□□□□ -0.66
LTBP3-204ENST00000525443 C16orf95Q9H693 158 aa10.92□□□□□ -0.66
LTBP3-204ENST00000525443 Q9HAA7 133 aa10.92□□□□□ -0.66
LTBP3-204ENST00000525443 C19orf84I3L1E1 186 aa10.92□□□□□ -0.66
LTBP3-204ENST00000525443 GNRH2O43555 120 aa10.92□□□□□ -0.66
LTBP3-204ENST00000525443 INAFM2P0DMQ5 153 aa10.92□□□□□ -0.66
LTBP3-204ENST00000525443 TRAV12-2A0A075B6T6 113 aa10.91□□□□□ -0.66
LTBP3-204ENST00000525443 A0A087WWL8 130 aa10.91□□□□□ -0.66
LTBP3-204ENST00000525443 DNAL4O96015 105 aa10.91□□□□□ -0.66
LTBP3-204ENST00000525443 HILS1P60008 231 aa10.91□□□□□ -0.66
LTBP3-204ENST00000525443 Q8N2B8 174 aa10.91□□□□□ -0.66
LTBP3-204ENST00000525443 LINC00846Q9NV44 126 aa10.91□□□□□ -0.66
LTBP3-204ENST00000525443 DPM3Q9P2X0 92 aa10.91□□□□□ -0.66
LTBP3-204ENST00000525443 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.91□□□□□ -0.663e-11■□□□□ 10.5
LTBP3-204ENST00000525443 CLPSL1A2RUU4 121 aa10.91□□□□□ -0.66
LTBP3-204ENST00000525443 BUB3O43684 328 aa10.91□□□□□ -0.66
LTBP3-204ENST00000525443 SUMO4Q6EEV6 95 aa10.91□□□□□ -0.66
LTBP3-204ENST00000525443 PRIMA1Q86XR5 153 aa10.91□□□□□ -0.66
LTBP3-204ENST00000525443 CENPEQ02224 2701 aa10.91□□□□□ -0.66
LTBP3-204ENST00000525443 NDUFC2O95298 119 aa10.9□□□□□ -0.66
LTBP3-204ENST00000525443 BEAN1Q3B7T3 259 aa10.9□□□□□ -0.66
LTBP3-204ENST00000525443 FAM218AQ96MZ4 157 aa10.9□□□□□ -0.66
LTBP3-204ENST00000525443 CTSGP08311 255 aa10.9□□□□□ -0.66
LTBP3-204ENST00000525443 FP248Q71RG6 208 aaPredicted RBP10.9□□□□□ -0.66
LTBP3-204ENST00000525443 C9orf129Q5T035 196 aaKnown RBP10.89□□□□□ -0.67
LTBP3-204ENST00000525443 LY6G5BQ8NDX9 201 aa10.89□□□□□ -0.67
LTBP3-204ENST00000525443 C14orf132Q9NPU4 83 aa10.89□□□□□ -0.67
LTBP3-204ENST00000525443 A0A0U1RRA0 63 aa10.89□□□□□ -0.67
LTBP3-204ENST00000525443 GHRHP01286 108 aa10.89□□□□□ -0.67
LTBP3-204ENST00000525443 Q6JHZ5 121 aa10.89□□□□□ -0.67
LTBP3-204ENST00000525443 SERP1Q9Y6X1 66 aa10.89□□□□□ -0.67
LTBP3-204ENST00000525443 EPG5Q9HCE0 2579 aa10.89□□□□□ -0.67
LTBP3-204ENST00000525443 LRRK2Q5S007 2527 aa10.89□□□□□ -0.67
LTBP3-204ENST00000525443 HOXD3P31249 432 aaPredicted RBP10.89□□□□□ -0.67
LTBP3-204ENST00000525443 LINC00315P59091 139 aa10.89□□□□□ -0.67
LTBP3-204ENST00000525443 VMO1Q7Z5L0 202 aa10.89□□□□□ -0.67
LTBP3-204ENST00000525443 IGLV11-55A0A075B6I3 123 aa10.88□□□□□ -0.67
LTBP3-204ENST00000525443 DEFB1P60022 68 aa10.88□□□□□ -0.67
LTBP3-204ENST00000525443 IGHV1-69P01742 117 aa10.88□□□□□ -0.67
LTBP3-204ENST00000525443 PSMB8P28062 276 aa10.88□□□□□ -0.67
LTBP3-204ENST00000525443 DOPEY1Q5JWR5 2465 aa10.88□□□□□ -0.67
LTBP3-204ENST00000525443 ZFP36P26651 326 aaKnown RBP10.87□□□□□ -0.67
LTBP3-204ENST00000525443 RNASE13Q5GAN3 156 aaKnown RBP10.87□□□□□ -0.67
LTBP3-204ENST00000525443 WFDC9Q8NEX5 89 aa10.87□□□□□ -0.67
LTBP3-204ENST00000525443 TRAV23DV6A0A075B6W5 121 aa10.87□□□□□ -0.67
LTBP3-204ENST00000525443 EPM2AB3EWF7 344 aa10.87□□□□□ -0.67
LTBP3-204ENST00000525443 NDUFC2-KCTD14E9PQ53 114 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms