RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 SERTAD4-AS1Q5TG53 156 aa10.38□□□□□ -0.75
LRRK1-202ENST00000525284 CDKN2A-AS1Q9UH64 79 aa10.38□□□□□ -0.75
LRRK1-202ENST00000525284 TP53TG3Q9ULZ0 132 aa10.38□□□□□ -0.75
LRRK1-202ENST00000525284 LINC00467Q9BRT7 94 aa10.37□□□□□ -0.75
LRRK1-202ENST00000525284 TRBV7-6A0A0J9YX20 115 aa10.37□□□□□ -0.75
LRRK1-202ENST00000525284 IGLV1-44P01699 117 aa10.37□□□□□ -0.75
LRRK1-202ENST00000525284 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.37□□□□□ -0.75
LRRK1-202ENST00000525284 NRGNQ92686 78 aa10.37□□□□□ -0.75
LRRK1-202ENST00000525284 SPRY4Q9C004 299 aa10.37□□□□□ -0.75
LRRK1-202ENST00000525284 C17orf82Q86X59 251 aaPredicted RBP10.36□□□□□ -0.75
LRRK1-202ENST00000525284 FAM167A-AS1Q96KT0 104 aa10.36□□□□□ -0.75
LRRK1-202ENST00000525284 USF3Q68DE3 2245 aa10.36□□□□□ -0.75
LRRK1-202ENST00000525284 TCF20Q9UGU0 1960 aaKnown RBP10.36□□□□□ -0.75
LRRK1-202ENST00000525284 SPRNQ5BIV9 151 aa10.36□□□□□ -0.75
LRRK1-202ENST00000525284 SPINK1P00995 79 aa10.36□□□□□ -0.75
LRRK1-202ENST00000525284 C7orf33Q8WU49 177 aa10.36□□□□□ -0.75
LRRK1-202ENST00000525284 WNK2Q9Y3S1 2297 aa10.36□□□□□ -0.75
LRRK1-202ENST00000525284 SMIM9A6NGZ8 99 aa10.35□□□□□ -0.75
LRRK1-202ENST00000525284 LY6LH3BQJ8 138 aa10.35□□□□□ -0.75
LRRK1-202ENST00000525284 BEAN1Q3B7T3 259 aa10.35□□□□□ -0.75
LRRK1-202ENST00000525284 CACNA1BQ00975 2339 aa10.35□□□□□ -0.75
LRRK1-202ENST00000525284 Q6ZQY7 126 aa10.35□□□□□ -0.75
LRRK1-202ENST00000525284 Q6ZTI0 123 aa10.35□□□□□ -0.75
LRRK1-202ENST00000525284 RETNLBQ9BQ08 111 aa10.35□□□□□ -0.75
LRRK1-202ENST00000525284 THSD7BQ9C0I4 1608 aa10.35□□□□□ -0.75
LRRK1-202ENST00000525284 C5orf56Q8N8D9 126 aa10.35□□□□□ -0.75
LRRK1-202ENST00000525284 DSCAML1Q8TD84 2053 aa10.35□□□□□ -0.75
LRRK1-202ENST00000525284 TRBV6-5A0A0K0K1A5 114 aa10.35□□□□□ -0.75
LRRK1-202ENST00000525284 IGLV2-18A0A075B6J9 118 aa10.34□□□□□ -0.75
LRRK1-202ENST00000525284 CLUHP3Q96NS8 147 aa10.34□□□□□ -0.75
LRRK1-202ENST00000525284 TRBV30A0A0K0K1B3 111 aa10.34□□□□□ -0.75
LRRK1-202ENST00000525284 UBE2D2P62837 147 aa10.34□□□□□ -0.75
LRRK1-202ENST00000525284 RSPO1Q2MKA7 263 aaPredicted RBP10.33□□□□□ -0.76
LRRK1-202ENST00000525284 IGF2-ASQ6U949 168 aa10.33□□□□□ -0.76
LRRK1-202ENST00000525284 IBA57-AS1B1ANH7 110 aa10.33□□□□□ -0.76
LRRK1-202ENST00000525284 LINC00208Q96KT6 92 aa10.33□□□□□ -0.76
LRRK1-202ENST00000525284 HELZP42694 1942 aaKnown RBP10.33□□□□□ -0.76
LRRK1-202ENST00000525284 GRNP28799 593 aaKnown RBP10.33□□□□□ -0.76
LRRK1-202ENST00000525284 IMUPQ9GZP8 106 aa10.33□□□□□ -0.76
LRRK1-202ENST00000525284 PLA2G2EQ9NZK7 142 aa10.33□□□□□ -0.76
LRRK1-202ENST00000525284 COL6A6A6NMZ7 2263 aa10.32□□□□□ -0.76
LRRK1-202ENST00000525284 DEFB113Q30KQ7 82 aa10.32□□□□□ -0.76
LRRK1-202ENST00000525284 C4orf3Q8WVX3 66 aa10.32□□□□□ -0.76
LRRK1-202ENST00000525284 THADAQ6YHU6 1953 aa10.32□□□□□ -0.76
LRRK1-202ENST00000525284 K7EMT4 169 aa10.32□□□□□ -0.76
LRRK1-202ENST00000525284 ESRGQ1W209 222 aa10.32□□□□□ -0.76
LRRK1-202ENST00000525284 MAPKAPK5-AS1Q8N8E1 139 aa10.32□□□□□ -0.76
LRRK1-202ENST00000525284 NEXN-AS1Q8NBZ9 246 aa10.32□□□□□ -0.76
LRRK1-202ENST00000525284 CACNA1EQ15878 2313 aa10.32□□□□□ -0.76
LRRK1-202ENST00000525284 A0A0J9YX75 114 aa10.32□□□□□ -0.76
LRRK1-202ENST00000525284 RPL37AP8A6NKH3 93 aa10.31□□□□□ -0.76
LRRK1-202ENST00000525284 ZNF22P17026 224 aaPredicted RBP10.31□□□□□ -0.76
LRRK1-202ENST00000525284 MYCNOSP40205 109 aa10.31□□□□□ -0.76
LRRK1-202ENST00000525284 UNQ9165/PRO28630Q6UXU0 137 aa10.31□□□□□ -0.76
LRRK1-202ENST00000525284 MAP6D1Q9H9H5 199 aa10.31□□□□□ -0.76
LRRK1-202ENST00000525284 ROS1P08922 2347 aa10.31□□□□□ -0.76
LRRK1-202ENST00000525284 LY6G6EA0A0G2JKS1 128 aa10.31□□□□□ -0.76
LRRK1-202ENST00000525284 MRPS36P82909 103 aaKnown RBP10.3□□□□□ -0.76
LRRK1-202ENST00000525284 C11orf53Q8IXP5 236 aa10.3□□□□□ -0.76
LRRK1-202ENST00000525284 FAM215AQ9Y5M1 114 aa10.3□□□□□ -0.76
LRRK1-202ENST00000525284 ZNF706Q9Y5V0 76 aaPredicted RBP10.3□□□□□ -0.76
LRRK1-202ENST00000525284 SPTAN1Q13813 2472 aaKnown RBP10.3□□□□□ -0.76
LRRK1-202ENST00000525284 Q8N976 141 aa10.3□□□□□ -0.76
LRRK1-202ENST00000525284 LINC00526Q96FQ7 95 aa10.3□□□□□ -0.76
LRRK1-202ENST00000525284 PKDREJQ9NTG1 2253 aa10.3□□□□□ -0.76
LRRK1-202ENST00000525284 ZGRF1Q86YA3 2104 aa10.29□□□□□ -0.76
LRRK1-202ENST00000525284 LY6G6CO95867 125 aa10.29□□□□□ -0.76
LRRK1-202ENST00000525284 SYCNQ0VAF6 134 aa10.29□□□□□ -0.76
LRRK1-202ENST00000525284 A8MZ25 164 aa10.29□□□□□ -0.76
LRRK1-202ENST00000525284 XGP55808 180 aa10.29□□□□□ -0.76
LRRK1-202ENST00000525284 PCOTHQ58A44 107 aa10.29□□□□□ -0.76
LRRK1-202ENST00000525284 GVINP1Q7Z2Y8 2422 aa10.29□□□□□ -0.76
LRRK1-202ENST00000525284 ZNF80P51504 273 aaPredicted RBP10.29□□□□□ -0.76
LRRK1-202ENST00000525284 IL17DQ8TAD2 202 aa10.29□□□□□ -0.76
LRRK1-202ENST00000525284 DHRS4-AS1Q9P1J3 65 aa10.29□□□□□ -0.76
LRRK1-202ENST00000525284 IGLV4-3A0A075B6K6 122 aa10.28□□□□□ -0.76
LRRK1-202ENST00000525284 C19orf71A6NCJ1 209 aa10.28□□□□□ -0.76
LRRK1-202ENST00000525284 DEFB131BA0A096LNP1 70 aa10.28□□□□□ -0.76
LRRK1-202ENST00000525284 TNCP24821 2201 aa10.28□□□□□ -0.76
LRRK1-202ENST00000525284 RBX1P62877 108 aa10.27□□□□□ -0.76
LRRK1-202ENST00000525284 ANAPC1Q9H1A4 1944 aa10.27□□□□□ -0.77
LRRK1-202ENST00000525284 CSDC2Q9Y534 153 aaKnown RBP10.27□□□□□ -0.77
LRRK1-202ENST00000525284 CFAP126Q5VTH2 177 aa10.27□□□□□ -0.77
LRRK1-202ENST00000525284 IGFL3Q6UXB1 125 aa10.27□□□□□ -0.77
LRRK1-202ENST00000525284 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.26□□□□□ -0.77
LRRK1-202ENST00000525284 ZNF524Q96C55 264 aa10.26□□□□□ -0.77
LRRK1-202ENST00000525284 A6NDX4 124 aa10.26□□□□□ -0.77
LRRK1-202ENST00000525284 VPREB1P12018 145 aa10.26□□□□□ -0.77
LRRK1-202ENST00000525284 SMIM11BQ8TCY0 68 aa10.25□□□□□ -0.77
LRRK1-202ENST00000525284 E7EUB6 86 aa10.25□□□□□ -0.77
LRRK1-202ENST00000525284 TRAV7A0A075B6U4 112 aa10.25□□□□□ -0.77
LRRK1-202ENST00000525284 H7C423 109 aa10.24□□□□□ -0.77
LRRK1-202ENST00000525284 M0R378 163 aa10.24□□□□□ -0.77
LRRK1-202ENST00000525284 PLXNA2O75051 1894 aa10.24□□□□□ -0.77
LRRK1-202ENST00000525284 CRYGAP11844 174 aa10.24□□□□□ -0.77
LRRK1-202ENST00000525284 GDF5OSQ5U4N7 250 aa10.24□□□□□ -0.77
LRRK1-202ENST00000525284 Q6JHZ5 121 aa10.24□□□□□ -0.77
LRRK1-202ENST00000525284 FRMPD3Q5JV73 1810 aa10.24□□□□□ -0.77
LRRK1-202ENST00000525284 PLAC8L1A1L4L8 177 aa10.24□□□□□ -0.77
LRRK1-202ENST00000525284 LINC00322Q6ZN03 302 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms