RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 M0R2N4 97 aa4.4□□□□□ -1.71
CD44-214ENST00000525211 TNFRSF6BO95407 300 aa4.4□□□□□ -1.71
CD44-214ENST00000525211 S100PP25815 95 aa4.4□□□□□ -1.71
CD44-214ENST00000525211 RPL36AP83881 106 aaKnown RBP4.4□□□□□ -1.71
CD44-214ENST00000525211 OR10J3Q5JRS4 329 aa4.4□□□□□ -1.71
CD44-214ENST00000525211 LGALS9CQ6DKI2 356 aa4.4□□□□□ -1.71
CD44-214ENST00000525211 KCNIP4Q6PIL6 250 aa4.4□□□□□ -1.71
CD44-214ENST00000525211 RPL36ALQ969Q0 106 aaKnown RBP4.4□□□□□ -1.71
CD44-214ENST00000525211 MRAP2Q96G30 205 aa4.4□□□□□ -1.71
CD44-214ENST00000525211 URB1-AS1Q96HZ7 61 aa4.4□□□□□ -1.71
CD44-214ENST00000525211 TMEM70Q9BUB7 260 aa4.4□□□□□ -1.71
CD44-214ENST00000525211 CHCHD7Q9BUK0 85 aa4.4□□□□□ -1.71
CD44-214ENST00000525211 GTSF1LQ9H1H1 148 aa4.4□□□□□ -1.71
CD44-214ENST00000525211 SMCO4Q9NRQ5 59 aa4.4□□□□□ -1.71
CD44-214ENST00000525211 MRPS16Q9Y3D3 137 aaKnown RBP4.4□□□□□ -1.71
CD44-214ENST00000525211 DNAH11Q96DT5 4516 aa4.4□□□□□ -1.71
CD44-214ENST00000525211 FRAS1Q86XX4 4008 aa4.39□□□□□ -1.71
CD44-214ENST00000525211 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.39□□□□□ -1.71
CD44-214ENST00000525211 LOC389332A0A1B0GUA5 103 aa4.39□□□□□ -1.71
CD44-214ENST00000525211 A0A1B0GW15 77 aa4.39□□□□□ -1.71
CD44-214ENST00000525211 IGKV2-29A2NJV5 120 aaPredicted RBP4.39□□□□□ -1.71
CD44-214ENST00000525211 TCAPO15273 167 aa4.39□□□□□ -1.71
CD44-214ENST00000525211 APCSP02743 223 aa4.39□□□□□ -1.71
CD44-214ENST00000525211 CKS2P33552 79 aa4.39□□□□□ -1.71
CD44-214ENST00000525211 FABP9Q0Z7S8 132 aa4.39□□□□□ -1.71
CD44-214ENST00000525211 LELP1Q5T871 98 aa4.39□□□□□ -1.71
CD44-214ENST00000525211 SMIM15Q7Z3B0 74 aa4.39□□□□□ -1.71
CD44-214ENST00000525211 FAM104AQ969W3 186 aa4.39□□□□□ -1.71
CD44-214ENST00000525211 PRELID3AQ96N28 172 aa4.39□□□□□ -1.71
CD44-214ENST00000525211 ALKBH7Q9BT30 221 aaPredicted RBP4.39□□□□□ -1.71
CD44-214ENST00000525211 GNB1LQ9BYB4 327 aa4.39□□□□□ -1.71
CD44-214ENST00000525211 FAM30AQ9NZY2 134 aa4.39□□□□□ -1.71
CD44-214ENST00000525211 IGLV4-60A0A075B6I1 120 aa4.38□□□□□ -1.71
CD44-214ENST00000525211 TRBV6-8A0A0A6YYG3 113 aa4.38□□□□□ -1.71
CD44-214ENST00000525211 IGHV3-30P01768 117 aa4.38□□□□□ -1.71
CD44-214ENST00000525211 IGHV3-33P01772 117 aa4.38□□□□□ -1.71
CD44-214ENST00000525211 IGHV3-30-3P0DP02 117 aa4.38□□□□□ -1.71
CD44-214ENST00000525211 IGHV3-30-5P0DP03 117 aa4.38□□□□□ -1.71
CD44-214ENST00000525211 TCTAP57738 103 aa4.38□□□□□ -1.71
CD44-214ENST00000525211 TIRAPP58753 221 aa4.38□□□□□ -1.71
CD44-214ENST00000525211 GAGE6Q13070 117 aa4.38□□□□□ -1.71
CD44-214ENST00000525211 Q6ZR54 194 aa4.38□□□□□ -1.71
CD44-214ENST00000525211 DAZ4Q86SG3 579 aaKnown RBP4.38□□□□□ -1.71
CD44-214ENST00000525211 UBE2DNLQ8IWF7 75 aa4.38□□□□□ -1.71
CD44-214ENST00000525211 UPK3BQ9BT76 320 aa4.38□□□□□ -1.71
CD44-214ENST00000525211 Q9H8V8 135 aa4.38□□□□□ -1.71
CD44-214ENST00000525211 ST20Q9HBF5 79 aa4.38□□□□□ -1.71
CD44-214ENST00000525211 DAZ3Q9NR90 486 aaKnown RBP4.38□□□□□ -1.71
CD44-214ENST00000525211 TRAPPC1Q9Y5R8 145 aa4.38□□□□□ -1.71
CD44-214ENST00000525211 TRBV27A0A0K0K1C4 114 aa4.37□□□□□ -1.71
CD44-214ENST00000525211 PRSS47A8MTI9 375 aa4.37□□□□□ -1.71
CD44-214ENST00000525211 H7C1H1 209 aa4.37□□□□□ -1.71
CD44-214ENST00000525211 HLA-DQA1P01909 254 aa4.37□□□□□ -1.71
CD44-214ENST00000525211 TRGC2P03986 189 aa4.37□□□□□ -1.71
CD44-214ENST00000525211 S100A8P05109 93 aa4.37□□□□□ -1.71
CD44-214ENST00000525211 ESDP10768 282 aa4.37□□□□□ -1.71
CD44-214ENST00000525211 RAB5AP20339 215 aa4.37□□□□□ -1.71
CD44-214ENST00000525211 PMCHP20382 165 aa4.37□□□□□ -1.71
CD44-214ENST00000525211 IFI27P40305 119 aaPredicted RBP4.37□□□□□ -1.71
CD44-214ENST00000525211 CCL18P55774 89 aa4.37□□□□□ -1.71
CD44-214ENST00000525211 SUMO2P61956 95 aaKnown RBP4.37□□□□□ -1.71
CD44-214ENST00000525211 RPL39P62891 51 aaKnown RBP4.37□□□□□ -1.71
CD44-214ENST00000525211 MPV17L2Q567V2 206 aa4.37□□□□□ -1.71
CD44-214ENST00000525211 NIT1Q86X76 327 aa4.37□□□□□ -1.71
CD44-214ENST00000525211 ORMDL3Q8N138 153 aa4.37□□□□□ -1.71
CD44-214ENST00000525211 Q8N976 141 aa4.37□□□□□ -1.71
CD44-214ENST00000525211 FRZBQ92765 325 aa4.37□□□□□ -1.71
CD44-214ENST00000525211 SMIM2Q9BVW6 85 aa4.37□□□□□ -1.71
CD44-214ENST00000525211 PCLOQ9Y6V0 5065 aa4.36□□□□□ -1.71
CD44-214ENST00000525211 SIVA1O15304 175 aa4.36□□□□□ -1.71
CD44-214ENST00000525211 NUPR1O60356 82 aa4.36□□□□□ -1.71
CD44-214ENST00000525211 S100A1P23297 94 aa4.36□□□□□ -1.71
CD44-214ENST00000525211 PTTG1IPP53801 180 aa4.36□□□□□ -1.71
CD44-214ENST00000525211 C20orf203Q8NBC4 194 aa4.36□□□□□ -1.71
CD44-214ENST00000525211 C18orf32Q8TCD1 76 aa4.36□□□□□ -1.71
CD44-214ENST00000525211 OPRPNQ99935 248 aaPredicted RBP4.36□□□□□ -1.71
CD44-214ENST00000525211 A0A096LNJ9 63 aa4.35□□□□□ -1.71
CD44-214ENST00000525211 IGHV1-24A0A0C4DH33 117 aa4.35□□□□□ -1.71
CD44-214ENST00000525211 NBDYA0A0U1RRE5 68 aa4.35□□□□□ -1.71
CD44-214ENST00000525211 I3L3M4 83 aa4.35□□□□□ -1.71
CD44-214ENST00000525211 VCYO14598 125 aa4.35□□□□□ -1.71
CD44-214ENST00000525211 RTL8CO15255 209 aa4.35□□□□□ -1.71
CD44-214ENST00000525211 PPBPP02775 128 aa4.35□□□□□ -1.71
CD44-214ENST00000525211 DNAH10OSP0CZ25 163 aa4.35□□□□□ -1.71
CD44-214ENST00000525211 AMTP48728 403 aa4.35□□□□□ -1.71
CD44-214ENST00000525211 RBX1P62877 108 aa4.35□□□□□ -1.71
CD44-214ENST00000525211 RPL32P62910 135 aaKnown RBP4.35□□□□□ -1.71
CD44-214ENST00000525211 COTL1Q14019 142 aa4.35□□□□□ -1.71
CD44-214ENST00000525211 RNASE13Q5GAN3 156 aaKnown RBP4.35□□□□□ -1.71
CD44-214ENST00000525211 LINC01556Q5JQF7 62 aa4.35□□□□□ -1.71
CD44-214ENST00000525211 ZC2HC1BQ5TFG8 222 aa4.35□□□□□ -1.71
CD44-214ENST00000525211 CLPSL2Q6UWE3 100 aa4.35□□□□□ -1.71
CD44-214ENST00000525211 SH2D6Q7Z4S9 175 aa4.35□□□□□ -1.71
CD44-214ENST00000525211 Q8N8P6 123 aa4.35□□□□□ -1.71
CD44-214ENST00000525211 C20orf78Q9BR46 151 aa4.35□□□□□ -1.71
CD44-214ENST00000525211 CHCHD5Q9BSY4 110 aa4.35□□□□□ -1.71
CD44-214ENST00000525211 TMEM243Q9BU79 118 aa4.35□□□□□ -1.71
CD44-214ENST00000525211 DYNC1H1Q14204 4646 aaKnown RBP4.35□□□□□ -1.71
CD44-214ENST00000525211 TRBV25-1A0A075B6N4 114 aa4.34□□□□□ -1.71
CD44-214ENST00000525211 TMEM262E9PQX1 116 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms