RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 REG3AQ06141 175 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 SMAGPQ0VAQ4 97 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 TMEM241Q24JQ0 296 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 C6orf99Q4VX62 202 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 MPV17L2Q567V2 206 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 C1orf137Q5JT78 98 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 UBE2NLQ5JXB2 153 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 FAM74A1Q5RGS3 127 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 SAPCD1Q5SSQ6 148 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 Q5XG85 94 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 IGFL1Q6UW32 110 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 PRNTQ86SH4 94 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 C8orf59Q8N0T1 100 aaPredicted RBP0.77□□□□□ -2.29
CD44-212ENST00000524922 OR10D4PQ8NGN7 298 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 OR2G3Q8NGZ4 309 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 ASB13Q8WXK3 278 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 MAFIPQ8WZ33 124 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 S100A16Q96FQ6 103 aaKnown RBP0.77□□□□□ -2.29
CD44-212ENST00000524922 AQP10Q96PS8 301 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 TP53RKQ96S44 253 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 PRRT1Q99946 306 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 SLC25A21Q9BQT8 299 aaPredicted RBP0.77□□□□□ -2.29
CD44-212ENST00000524922 KRTAP2-1Q9BYU5 128 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 ATG5Q9H1Y0 275 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 BLOC1S6Q9UL45 172 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 PSG8Q9UQ74 426 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 AK6Q9Y3D8 172 aaKnown RBP0.77□□□□□ -2.29
CD44-212ENST00000524922 STRAPQ9Y3F4 350 aaKnown RBP0.77□□□□□ -2.29
CD44-212ENST00000524922 CSDC2Q9Y534 153 aaKnown RBP0.77□□□□□ -2.29
CD44-212ENST00000524922 PHLDA3Q9Y5J5 127 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 IGKV2-40A0A087WW87 121 aaPredicted RBP0.76□□□□□ -2.29
CD44-212ENST00000524922 A0A0G2JRQ6 117 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 TRBV30A0A0K0K1B3 111 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 TRBV6-1A0A0K0K1D8 114 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 LOC100131303A0A0U1RQF7 123 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP0.76□□□□□ -2.29
CD44-212ENST00000524922 H3BQ15 152 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 SYNGR2O43760 224 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 SLC25A20O43772 301 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 PTTG1O95997 202 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 IGKV2D-40P01614 121 aaPredicted RBP0.76□□□□□ -2.29
CD44-212ENST00000524922 OR5AL1P0C617 328 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 OR5G3P0C626 314 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 RNASE3P12724 160 aaKnown RBP0.76□□□□□ -2.29
CD44-212ENST00000524922 RNASE4P34096 147 aaKnown RBP0.76□□□□□ -2.29
CD44-212ENST00000524922 CTRLP40313 264 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 TAS2R19P59542 299 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 KRTAP12-3P60328 96 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 RPL32P62910 135 aaKnown RBP0.76□□□□□ -2.29
CD44-212ENST00000524922 EIF5AP63241 154 aaKnown RBP0.76□□□□□ -2.29
CD44-212ENST00000524922 FABP5Q01469 135 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 MEF2BQ02080 365 aaPredicted RBP0.76□□□□□ -2.29
CD44-212ENST00000524922 SYCNQ0VAF6 134 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 ATP6V1FQ16864 119 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 SP6Q3SY56 376 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 TMEM128Q5BJH2 165 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 C9orf116Q5BN46 136 aaPredicted RBP0.76□□□□□ -2.29
CD44-212ENST00000524922 RNASE10Q5GAN6 216 aaKnown RBP0.76□□□□□ -2.29
CD44-212ENST00000524922 PRR9Q5T870 116 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 C1orf146Q5VVC0 180 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 C10orf113Q5VZT2 155 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 EIF5AL1Q6IS14 154 aaKnown RBP0.76□□□□□ -2.29
CD44-212ENST00000524922 CD164L2Q6UWJ8 174 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 PATE2Q6UY27 113 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 MRPL52Q86TS9 123 aaKnown RBP0.76□□□□□ -2.29
CD44-212ENST00000524922 SELENOHQ8IZQ5 122 aaKnown RBP0.76□□□□□ -2.29
CD44-212ENST00000524922 LINC01561Q8N1V8 128 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 LINC00269Q8N2A0 174 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 C15orf54Q8N8G6 183 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 C20orf203Q8NBC4 194 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 TMEM229BQ8NBD8 167 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 NUP35Q8NFH5 326 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 OR2D3Q8NGH3 330 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 RNASE11Q8TAA1 199 aaKnown RBP0.76□□□□□ -2.29
CD44-212ENST00000524922 CYGBQ8WWM9 190 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 DPH3Q96FX2 82 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 DIRAS2Q96HU8 199 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 TMEM101Q96IK0 257 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 BTF3L4Q96K17 158 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 SMIM8Q96KF7 97 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 NDFIP1Q9BT67 221 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 NKX6-2Q9C056 277 aaPredicted RBP0.76□□□□□ -2.29
CD44-212ENST00000524922 C20orf85Q9H1P6 137 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 OTORQ9NRC9 128 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 SCN3BQ9NY72 215 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 MTFP1Q9UDX5 166 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 C14orf166Q9Y224 244 aaKnown RBP0.76□□□□□ -2.29
CD44-212ENST00000524922 TPRKBQ9Y3C4 175 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 ARL2-SNX15V9GYD0 113 aa0.76□□□□□ -2.29
CD44-212ENST00000524922 IGKV2-24A0A0C4DH68 120 aa0.75□□□□□ -2.29
CD44-212ENST00000524922 SMIM31A0A1B0GVY4 71 aa0.75□□□□□ -2.29
CD44-212ENST00000524922 A0A1W2PNN7 141 aa0.75□□□□□ -2.29
CD44-212ENST00000524922 C1orf196B1AJZ1 125 aa0.75□□□□□ -2.29
CD44-212ENST00000524922 K7EQM0 130 aa0.75□□□□□ -2.29
CD44-212ENST00000524922 M0R2T5 61 aa0.75□□□□□ -2.29
CD44-212ENST00000524922 M0R3E3 92 aa0.75□□□□□ -2.29
CD44-212ENST00000524922 GOSR2O14653 212 aa0.75□□□□□ -2.29
CD44-212ENST00000524922 AGPAT2O15120 278 aa0.75□□□□□ -2.29
CD44-212ENST00000524922 TCAPO15273 167 aa0.75□□□□□ -2.29
CD44-212ENST00000524922 BCE1O60756 84 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms