RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 TRGC1P0CF51 173 aa12□□□□□ -0.49
PTP4A3-206ENST00000524028 NUDT10Q8NFP7 164 aa12□□□□□ -0.49
PTP4A3-206ENST00000524028 NUDT11Q96G61 164 aa12□□□□□ -0.49
PTP4A3-206ENST00000524028 TEX46H3BTG2 121 aa11.99□□□□□ -0.49
PTP4A3-206ENST00000524028 CTRLP40313 264 aa11.99□□□□□ -0.49
PTP4A3-206ENST00000524028 CIRBPQ14011 172 aaKnown RBP11.99□□□□□ -0.49
PTP4A3-206ENST00000524028 EIF5AL1Q6IS14 154 aaKnown RBP11.99□□□□□ -0.49
PTP4A3-206ENST00000524028 BCL2P10415 239 aa11.98□□□□□ -0.49
PTP4A3-206ENST00000524028 WDR73Q6P4I2 378 aa11.98□□□□□ -0.49
PTP4A3-206ENST00000524028 AMTP48728 403 aa11.97□□□□□ -0.49
PTP4A3-206ENST00000524028 GATD1Q8NB37 220 aa11.97□□□□□ -0.49
PTP4A3-206ENST00000524028 CNFNQ9BYD5 112 aa11.97□□□□□ -0.49
PTP4A3-206ENST00000524028 BIN3Q9NQY0 253 aa11.97□□□□□ -0.49
PTP4A3-206ENST00000524028 TRAV26-2A0A0B4J265 109 aa11.96□□□□□ -0.49
PTP4A3-206ENST00000524028 K7EN84 100 aa11.96□□□□□ -0.49
PTP4A3-206ENST00000524028 UBE2L6O14933 153 aa11.96□□□□□ -0.49
PTP4A3-206ENST00000524028 COTL1Q14019 142 aa11.96□□□□□ -0.49
PTP4A3-206ENST00000524028 TWIST1Q15672 202 aa11.96□□□□□ -0.49
PTP4A3-206ENST00000524028 RNASE7Q9H1E1 156 aaKnown RBP11.96□□□□□ -0.49
PTP4A3-206ENST00000524028 IGHV3-64A0A075B6Q5 118 aa11.95□□□□□ -0.5
PTP4A3-206ENST00000524028 CHTF8P0CG12 524 aa11.95□□□□□ -0.5
PTP4A3-206ENST00000524028 FOXA3P55318 350 aaPredicted RBP11.94□□□□□ -0.5
PTP4A3-206ENST00000524028 C15orf56Q8N910 161 aa11.94□□□□□ -0.5
PTP4A3-206ENST00000524028 OCC1Q8TAD7 63 aa11.94□□□□□ -0.5
PTP4A3-206ENST00000524028 RPP21Q9H633 154 aaKnown RBP11.94□□□□□ -0.5
PTP4A3-206ENST00000524028 AP5S1Q9NUS5 200 aa11.94□□□□□ -0.5
PTP4A3-206ENST00000524028 A0A087WYN8 130 aa11.93□□□□□ -0.5
PTP4A3-206ENST00000524028 GAGE12HA6NDE8 117 aa11.93□□□□□ -0.5
PTP4A3-206ENST00000524028 SPACA4Q8TDM5 124 aa11.93□□□□□ -0.5
PTP4A3-206ENST00000524028 GTSF1Q8WW33 167 aa11.93□□□□□ -0.5
PTP4A3-206ENST00000524028 RPL39LQ96EH5 51 aaKnown RBP11.93□□□□□ -0.5
PTP4A3-206ENST00000524028 UBR4Q5T4S7 5183 aa11.92□□□□□ -0.5
PTP4A3-206ENST00000524028 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.92□□□□□ -0.5
PTP4A3-206ENST00000524028 IGKV3OR2-268A0A0C4DH90 116 aa11.92□□□□□ -0.5
PTP4A3-206ENST00000524028 MT1HL1P0DM35 61 aa11.92□□□□□ -0.5
PTP4A3-206ENST00000524028 Q6ZNX1 250 aa11.92□□□□□ -0.5
PTP4A3-206ENST00000524028 SLC51BQ86UW2 128 aa11.92□□□□□ -0.5
PTP4A3-206ENST00000524028 TCTE3Q8IZS6 198 aa11.92□□□□□ -0.5
PTP4A3-206ENST00000524028 DPH3Q96FX2 82 aa11.92□□□□□ -0.5
PTP4A3-206ENST00000524028 PLA2G2DQ9UNK4 145 aa11.92□□□□□ -0.5
PTP4A3-206ENST00000524028 RNF185Q96GF1 192 aa11.9□□□□□ -0.5
PTP4A3-206ENST00000524028 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.89□□□□□ -0.51
PTP4A3-206ENST00000524028 IGKV2-29A2NJV5 120 aaPredicted RBP11.89□□□□□ -0.51
PTP4A3-206ENST00000524028 TAGLN2P37802 199 aaKnown RBP11.89□□□□□ -0.51
PTP4A3-206ENST00000524028 HIGD2BQ4VC39 106 aa11.89□□□□□ -0.51
PTP4A3-206ENST00000524028 Q6ZRU5 148 aa11.88□□□□□ -0.51
PTP4A3-206ENST00000524028 CHCHD10Q8WYQ3 142 aaPredicted RBP11.88□□□□□ -0.51
PTP4A3-206ENST00000524028 NCR2O95944 276 aa11.87□□□□□ -0.51
PTP4A3-206ENST00000524028 COX6A2Q02221 97 aa11.87□□□□□ -0.51
PTP4A3-206ENST00000524028 AMMECR1LQ6DCA0 310 aa11.87□□□□□ -0.51
PTP4A3-206ENST00000524028 CFAP161Q6P656 301 aa11.87□□□□□ -0.51
PTP4A3-206ENST00000524028 PLAC8Q9NZF1 115 aa11.87□□□□□ -0.51
PTP4A3-206ENST00000524028 SDHAF1A6NFY7 115 aa11.86□□□□□ -0.51
PTP4A3-206ENST00000524028 FGF6P10767 208 aa11.86□□□□□ -0.51
PTP4A3-206ENST00000524028 RPS10P46783 165 aaKnown RBP11.86□□□□□ -0.51
PTP4A3-206ENST00000524028 RNASEKQ6P5S7 137 aaKnown RBP11.86□□□□□ -0.51
PTP4A3-206ENST00000524028 PRSS3P2Q8NHM4 247 aa11.86□□□□□ -0.51
PTP4A3-206ENST00000524028 FAM231BA6NCW3 169 aa11.85□□□□□ -0.51
PTP4A3-206ENST00000524028 H7C423 109 aa11.85□□□□□ -0.51
PTP4A3-206ENST00000524028 GAS8-AS1O95177 125 aa11.85□□□□□ -0.51
PTP4A3-206ENST00000524028 APCSP02743 223 aa11.85□□□□□ -0.51
PTP4A3-206ENST00000524028 PHOX2AO14813 284 aa11.84□□□□□ -0.51
PTP4A3-206ENST00000524028 GATCO43716 136 aaKnown RBP11.84□□□□□ -0.51
PTP4A3-206ENST00000524028 FOXI1Q12951 378 aa11.84□□□□□ -0.51
PTP4A3-206ENST00000524028 FAM231DQ6ZW35 169 aa11.84□□□□□ -0.51
PTP4A3-206ENST00000524028 SMIM15Q7Z3B0 74 aa11.84□□□□□ -0.51
PTP4A3-206ENST00000524028 GVQW2A0A096LPI5 108 aaPredicted RBP11.83□□□□□ -0.52
PTP4A3-206ENST00000524028 TMEM250H0YL14 139 aa11.83□□□□□ -0.52
PTP4A3-206ENST00000524028 NDUFS6O75380 124 aaKnown RBP11.83□□□□□ -0.52
PTP4A3-206ENST00000524028 TEX261Q6UWH6 196 aa11.83□□□□□ -0.52
PTP4A3-206ENST00000524028 TRBV6-5A0A0K0K1A5 114 aa11.82□□□□□ -0.52
PTP4A3-206ENST00000524028 MAJINQ3KP22 176 aa11.82□□□□□ -0.52
PTP4A3-206ENST00000524028 IGKV2-24A0A0C4DH68 120 aa11.81□□□□□ -0.52
PTP4A3-206ENST00000524028 A8MWL6 223 aa11.81□□□□□ -0.52
PTP4A3-206ENST00000524028 I3L3M4 83 aa11.81□□□□□ -0.52
PTP4A3-206ENST00000524028 PMCHP20382 165 aa11.81□□□□□ -0.52
PTP4A3-206ENST00000524028 ALKAL2Q6UX46 152 aa11.81□□□□□ -0.52
PTP4A3-206ENST00000524028 OR5A1Q8NGJ0 315 aa11.81□□□□□ -0.52
PTP4A3-206ENST00000524028 TSHBP01222 138 aa11.8□□□□□ -0.52
PTP4A3-206ENST00000524028 ESDP10768 282 aa11.8□□□□□ -0.52
PTP4A3-206ENST00000524028 ZNF25P17030 456 aaPredicted RBP11.8□□□□□ -0.52
PTP4A3-206ENST00000524028 LYPD6BQ8NI32 183 aa11.8□□□□□ -0.52
PTP4A3-206ENST00000524028 A0A096LNI7 61 aa11.79□□□□□ -0.52
PTP4A3-206ENST00000524028 LINC00959A0A1B0GUT2 108 aa11.79□□□□□ -0.52
PTP4A3-206ENST00000524028 XCL1P47992 114 aa11.79□□□□□ -0.52
PTP4A3-206ENST00000524028 CEBPGP53567 150 aa11.79□□□□□ -0.52
PTP4A3-206ENST00000524028 CT83Q5H943 113 aa11.79□□□□□ -0.52
PTP4A3-206ENST00000524028 STPG4Q8N801 248 aa11.79□□□□□ -0.52
PTP4A3-206ENST00000524028 C7orf33Q8WU49 177 aa11.79□□□□□ -0.52
PTP4A3-206ENST00000524028 TMEM242Q9NWH2 141 aa11.79□□□□□ -0.52
PTP4A3-206ENST00000524028 CCL25O15444 150 aa11.78□□□□□ -0.52
PTP4A3-206ENST00000524028 BLOC1S1P78537 153 aa11.78□□□□□ -0.52
PTP4A3-206ENST00000524028 LINC00526Q96FQ7 95 aa11.78□□□□□ -0.52
PTP4A3-206ENST00000524028 TMEM101Q96IK0 257 aa11.77□□□□□ -0.53
PTP4A3-206ENST00000524028 BTF3L4Q96K17 158 aa11.77□□□□□ -0.53
PTP4A3-206ENST00000524028 ST20Q9HBF5 79 aa11.77□□□□□ -0.53
PTP4A3-206ENST00000524028 RAB4AP20338 218 aa11.76□□□□□ -0.53
PTP4A3-206ENST00000524028 POLR2KP53803 58 aaKnown RBP11.76□□□□□ -0.53
PTP4A3-206ENST00000524028 PRR3P79522 188 aaKnown RBP11.76□□□□□ -0.53
PTP4A3-206ENST00000524028 TMEM191AQ9H0A3 160 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms