RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-213ENST00000523655 YIPF3Q9GZM5 350 aa2.37□□□□□ -2.03
SREK1-213ENST00000523655 TRAV36DV7A0A075B6V5 113 aa2.36□□□□□ -2.03
SREK1-213ENST00000523655 IQCF6A8MYZ5 107 aa2.36□□□□□ -2.03
SREK1-213ENST00000523655 SHBGP04278 402 aa2.36□□□□□ -2.03
SREK1-213ENST00000523655 HMGN2P05204 90 aaKnown RBP2.36□□□□□ -2.03
SREK1-213ENST00000523655 RNASE2P10153 161 aaKnown RBP2.36□□□□□ -2.03
SREK1-213ENST00000523655 CCL3L1P16619 93 aa2.36□□□□□ -2.03
SREK1-213ENST00000523655 LGALS3P17931 250 aaKnown RBP2.36□□□□□ -2.03
SREK1-213ENST00000523655 CAV3P56539 151 aa2.36□□□□□ -2.03
SREK1-213ENST00000523655 RHOGP84095 191 aa2.36□□□□□ -2.03
SREK1-213ENST00000523655 PSG9Q00887 426 aa2.36□□□□□ -2.03
SREK1-213ENST00000523655 C20orf166-AS1Q96NR2 134 aa2.36□□□□□ -2.03
SREK1-213ENST00000523655 SDF2Q99470 211 aa2.36□□□□□ -2.03
SREK1-213ENST00000523655 OR2H1Q9GZK4 316 aa2.36□□□□□ -2.03
SREK1-213ENST00000523655 POPDC3Q9HBV1 291 aa2.36□□□□□ -2.03
SREK1-213ENST00000523655 NDUFB11Q9NX14 153 aa2.36□□□□□ -2.03
SREK1-213ENST00000523655 PRO2289Q9P1D8 64 aa2.36□□□□□ -2.03
SREK1-213ENST00000523655 BAIAP2Q9UQB8 552 aa2.36□□□□□ -2.03
SREK1-213ENST00000523655 MACF1Q9UPN3 7388 aaKnown RBP2.36□□□□□ -2.03
SREK1-213ENST00000523655 TMSB15BA0A087X1C1 80 aa2.35□□□□□ -2.03
SREK1-213ENST00000523655 DEFB131BA0A096LNP1 70 aa2.35□□□□□ -2.03
SREK1-213ENST00000523655 BORCS7-ASMTA0A0B4J1R7 106 aa2.35□□□□□ -2.03
SREK1-213ENST00000523655 ODAMA1E959 279 aa2.35□□□□□ -2.03
SREK1-213ENST00000523655 RFPL4AA6NLU0 287 aa2.35□□□□□ -2.03
SREK1-213ENST00000523655 RFPL4AL1F8VTS6 287 aa2.35□□□□□ -2.03
SREK1-213ENST00000523655 GABARAPH6UMI1 98 aa2.35□□□□□ -2.03
SREK1-213ENST00000523655 CXCL1P09341 107 aa2.35□□□□□ -2.03
SREK1-213ENST00000523655 METTL15P1P0C7V9 234 aa2.35□□□□□ -2.03
SREK1-213ENST00000523655 CRYGAP11844 174 aa2.35□□□□□ -2.03
SREK1-213ENST00000523655 SS18Q15532 418 aa2.35□□□□□ -2.03
SREK1-213ENST00000523655 NDUFA5Q16718 116 aa2.35□□□□□ -2.03
SREK1-213ENST00000523655 CCDC153Q494R4 210 aa2.35□□□□□ -2.03
SREK1-213ENST00000523655 LCN15Q6UWW0 184 aa2.35□□□□□ -2.03
SREK1-213ENST00000523655 LZICQ8WZA0 190 aa2.35□□□□□ -2.03
SREK1-213ENST00000523655 GAFA1Q96PS6 74 aa2.35□□□□□ -2.03
SREK1-213ENST00000523655 PRADC1Q9BSG0 188 aa2.35□□□□□ -2.03
SREK1-213ENST00000523655 TMEM138Q9NPI0 162 aa2.35□□□□□ -2.03
SREK1-213ENST00000523655 TRAPPC2LQ9UL33 140 aa2.35□□□□□ -2.03
SREK1-213ENST00000523655 TRAV5A0A0B4J249 113 aa2.34□□□□□ -2.03
SREK1-213ENST00000523655 KRTAP10-4P60372 401 aaPredicted RBP2.34□□□□□ -2.03
SREK1-213ENST00000523655 MSMO1Q15800 293 aa2.34□□□□□ -2.03
SREK1-213ENST00000523655 Q6ZQT0 140 aa2.34□□□□□ -2.03
SREK1-213ENST00000523655 PHF5AQ7RTV0 110 aaKnown RBP2.34□□□□□ -2.03
SREK1-213ENST00000523655 IFT20Q8IY31 132 aa2.34□□□□□ -2.03
SREK1-213ENST00000523655 LINC00304Q8N9R0 145 aa2.34□□□□□ -2.03
SREK1-213ENST00000523655 TMEM229BQ8NBD8 167 aa2.34□□□□□ -2.03
SREK1-213ENST00000523655 OR2T10Q8NGZ9 312 aa2.34□□□□□ -2.03
SREK1-213ENST00000523655 AQP3Q92482 292 aa2.34□□□□□ -2.03
SREK1-213ENST00000523655 ADAT1Q9BUB4 502 aaKnown RBP2.34□□□□□ -2.03
SREK1-213ENST00000523655 FAM107BQ9H098 131 aa2.34□□□□□ -2.03
SREK1-213ENST00000523655 NAT8BQ9UHF3 227 aa2.34□□□□□ -2.03
SREK1-213ENST00000523655 HMSDA8MTL9 139 aa2.33□□□□□ -2.04
SREK1-213ENST00000523655 CST7O76096 145 aa2.33□□□□□ -2.04
SREK1-213ENST00000523655 CTSDP07339 412 aaPredicted RBP2.33□□□□□ -2.04
SREK1-213ENST00000523655 P0C880 135 aa2.33□□□□□ -2.04
SREK1-213ENST00000523655 TRGC1P0CF51 173 aa2.33□□□□□ -2.04
SREK1-213ENST00000523655 HINT1P49773 126 aaPredicted RBP2.33□□□□□ -2.04
SREK1-213ENST00000523655 TMBIM6P55061 237 aa2.33□□□□□ -2.04
SREK1-213ENST00000523655 TMEM258P61165 79 aa2.33□□□□□ -2.04
SREK1-213ENST00000523655 ERHP84090 104 aaKnown RBP2.33□□□□□ -2.04
SREK1-213ENST00000523655 SOSTDC1Q6X4U4 206 aa2.33□□□□□ -2.04
SREK1-213ENST00000523655 OR5D16Q8NGK9 328 aa2.33□□□□□ -2.04
SREK1-213ENST00000523655 ZC2HC1AQ96GY0 325 aa2.33□□□□□ -2.04
SREK1-213ENST00000523655 NPCDR1Q9BY65 106 aa2.33□□□□□ -2.04
SREK1-213ENST00000523655 NHP2Q9NX24 153 aaKnown RBP2.33□□□□□ -2.04
SREK1-213ENST00000523655 A0A096LPI6 279 aa2.32□□□□□ -2.04
SREK1-213ENST00000523655 G3V318 75 aa2.32□□□□□ -2.04
SREK1-213ENST00000523655 CKS1BP61024 79 aa2.32□□□□□ -2.04
SREK1-213ENST00000523655 PCBD1P61457 104 aa2.32□□□□□ -2.04
SREK1-213ENST00000523655 COPZ1P61923 177 aa2.32□□□□□ -2.04
SREK1-213ENST00000523655 MYL5Q02045 173 aa2.32□□□□□ -2.04
SREK1-213ENST00000523655 SLC38A11Q08AI6 406 aa2.32□□□□□ -2.04
SREK1-213ENST00000523655 TMEM189A5PLL7 270 aa2.31□□□□□ -2.04
SREK1-213ENST00000523655 FNDC10F2Z333 226 aa2.31□□□□□ -2.04
SREK1-213ENST00000523655 SDCBPO00560 298 aaPredicted RBP2.31□□□□□ -2.04
SREK1-213ENST00000523655 PGLYRP1O75594 196 aaPredicted RBP2.31□□□□□ -2.04
SREK1-213ENST00000523655 DBIP07108 87 aaKnown RBP2.31□□□□□ -2.04
SREK1-213ENST00000523655 SCTP09683 121 aa2.31□□□□□ -2.04
SREK1-213ENST00000523655 PIPP12273 146 aaPredicted RBP2.31□□□□□ -2.04
SREK1-213ENST00000523655 AKR1C3P42330 323 aa2.31□□□□□ -2.04
SREK1-213ENST00000523655 AQP4P55087 323 aa2.31□□□□□ -2.04
SREK1-213ENST00000523655 HBBP68871 147 aa2.31□□□□□ -2.04
SREK1-213ENST00000523655 ZNF345Q14585 488 aa2.31□□□□□ -2.04
SREK1-213ENST00000523655 DEFB114Q30KQ6 69 aa2.31□□□□□ -2.04
SREK1-213ENST00000523655 SMIM21Q3B7S5 101 aa2.31□□□□□ -2.04
SREK1-213ENST00000523655 KRTAP20-1Q3LI63 56 aa2.31□□□□□ -2.04
SREK1-213ENST00000523655 EIF5AL1Q6IS14 154 aaKnown RBP2.31□□□□□ -2.04
SREK1-213ENST00000523655 PATE2Q6UY27 113 aa2.31□□□□□ -2.04
SREK1-213ENST00000523655 C4orf22Q6V702 233 aa2.31□□□□□ -2.04
SREK1-213ENST00000523655 Q6ZTI0 123 aa2.31□□□□□ -2.04
SREK1-213ENST00000523655 C1orf54Q8WWF1 131 aa2.31□□□□□ -2.04
SREK1-213ENST00000523655 DPY30Q9C005 99 aa2.31□□□□□ -2.04
SREK1-213ENST00000523655 BCL2L10Q9HD36 194 aa2.31□□□□□ -2.04
SREK1-213ENST00000523655 NOP16Q9Y3C1 178 aaKnown RBP2.31□□□□□ -2.04
SREK1-213ENST00000523655 IGKV1D-17A0A075B6S4 117 aa2.3□□□□□ -2.04
SREK1-213ENST00000523655 IGHV1-58A0A0C4DH39 117 aa2.3□□□□□ -2.04
SREK1-213ENST00000523655 TRBV7-6A0A0J9YX20 115 aa2.3□□□□□ -2.04
SREK1-213ENST00000523655 SDHAF1A6NFY7 115 aa2.3□□□□□ -2.04
SREK1-213ENST00000523655 HIST1H2BKO60814 126 aa2.3□□□□□ -2.04
SREK1-213ENST00000523655 NAPSAO96009 420 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms