RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 TNFSF18Q9UNG2 199 aa7.11□□□□□ -1.27
SDCBP-211ENST00000523441 CTXND1A0A1B0GTU2 59 aa7.1□□□□□ -1.27
SDCBP-211ENST00000523441 GHRHP01286 108 aa7.1□□□□□ -1.27
SDCBP-211ENST00000523441 XCL1P47992 114 aa7.1□□□□□ -1.27
SDCBP-211ENST00000523441 SERF2P84101 59 aa7.1□□□□□ -1.27
SDCBP-211ENST00000523441 COX8CQ7Z4L0 72 aa7.1□□□□□ -1.27
SDCBP-211ENST00000523441 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.09□□□□□ -1.27
SDCBP-211ENST00000523441 A0A1W2PNN7 141 aa7.09□□□□□ -1.27
SDCBP-211ENST00000523441 IGKV2-29A2NJV5 120 aaPredicted RBP7.09□□□□□ -1.27
SDCBP-211ENST00000523441 SNAI2O43623 268 aa7.09□□□□□ -1.27
SDCBP-211ENST00000523441 COTL1Q14019 142 aa7.09□□□□□ -1.27
SDCBP-211ENST00000523441 A0A1B0GV50 99 aa7.08□□□□□ -1.28
SDCBP-211ENST00000523441 OR5AL1P0C617 328 aa7.08□□□□□ -1.28
SDCBP-211ENST00000523441 RPL7L1Q6DKI1 246 aaKnown RBP7.08□□□□□ -1.28
SDCBP-211ENST00000523441 RASL11AQ6T310 242 aa7.08□□□□□ -1.28
SDCBP-211ENST00000523441 PHF5AQ7RTV0 110 aaKnown RBP7.08□□□□□ -1.28
SDCBP-211ENST00000523441 NKX6-2Q9C056 277 aaPredicted RBP7.08□□□□□ -1.28
SDCBP-211ENST00000523441 MAP1LC3B2A6NCE7 125 aa7.07□□□□□ -1.28
SDCBP-211ENST00000523441 BCL2P10415 239 aa7.07□□□□□ -1.28
SDCBP-211ENST00000523441 PTTG1IPP53801 180 aa7.07□□□□□ -1.28
SDCBP-211ENST00000523441 SYCNQ0VAF6 134 aa7.07□□□□□ -1.28
SDCBP-211ENST00000523441 FOXI1Q12951 378 aa7.07□□□□□ -1.28
SDCBP-211ENST00000523441 FAM210AQ96ND0 272 aa7.07□□□□□ -1.28
SDCBP-211ENST00000523441 SSBP4Q9BWG4 385 aaPredicted RBP7.07□□□□□ -1.28
SDCBP-211ENST00000523441 MAP1LC3BQ9GZQ8 125 aa7.07□□□□□ -1.28
SDCBP-211ENST00000523441 SCO2A0A1W2PP80 73 aa7.06□□□□□ -1.28
SDCBP-211ENST00000523441 ZNF561-AS1K7EIQ3 104 aa7.06□□□□□ -1.28
SDCBP-211ENST00000523441 PAGE4O60829 102 aa7.06□□□□□ -1.28
SDCBP-211ENST00000523441 AKR1C8PQ5T2L2 129 aa7.06□□□□□ -1.28
SDCBP-211ENST00000523441 BAGE2Q86Y30 109 aa7.06□□□□□ -1.28
SDCBP-211ENST00000523441 PKIGQ9Y2B9 76 aa7.06□□□□□ -1.28
SDCBP-211ENST00000523441 CCL25O15444 150 aa7.05□□□□□ -1.28
SDCBP-211ENST00000523441 TSPAN13O95857 204 aa7.05□□□□□ -1.28
SDCBP-211ENST00000523441 RPL18AQ02543 176 aaKnown RBP7.05□□□□□ -1.28
SDCBP-211ENST00000523441 C9orf116Q5BN46 136 aaPredicted RBP7.05□□□□□ -1.28
SDCBP-211ENST00000523441 FER1L6-AS1Q8NA97 138 aa7.05□□□□□ -1.28
SDCBP-211ENST00000523441 NIT2Q9NQR4 276 aa7.05□□□□□ -1.28
SDCBP-211ENST00000523441 IGHV1-58A0A0C4DH39 117 aa7.04□□□□□ -1.28
SDCBP-211ENST00000523441 LOC107984640A0A0U1RRK4 108 aa7.04□□□□□ -1.28
SDCBP-211ENST00000523441 CXCL1P09341 107 aa7.04□□□□□ -1.28
SDCBP-211ENST00000523441 UBE2D1P51668 147 aa7.04□□□□□ -1.28
SDCBP-211ENST00000523441 EIF5AP63241 154 aaKnown RBP7.04□□□□□ -1.28
SDCBP-211ENST00000523441 Q6ZNX1 250 aa7.04□□□□□ -1.28
SDCBP-211ENST00000523441 DIRC1Q969H9 104 aa7.04□□□□□ -1.28
SDCBP-211ENST00000523441 PGLYRP4Q96LB8 373 aa7.04□□□□□ -1.28
SDCBP-211ENST00000523441 A0A087WZ39 114 aa7.03□□□□□ -1.28
SDCBP-211ENST00000523441 BORCS7-ASMTA0A0B4J1R7 106 aa7.03□□□□□ -1.28
SDCBP-211ENST00000523441 UPK1BO75841 260 aa7.03□□□□□ -1.28
SDCBP-211ENST00000523441 FGF6P10767 208 aa7.03□□□□□ -1.28
SDCBP-211ENST00000523441 IFITM3Q01628 133 aa7.03□□□□□ -1.28
SDCBP-211ENST00000523441 IGLV4-69A0A075B6H9 119 aa7.02□□□□□ -1.29
SDCBP-211ENST00000523441 IGLV7-43P04211 117 aa7.02□□□□□ -1.29
SDCBP-211ENST00000523441 FHITP49789 147 aa7.02□□□□□ -1.29
SDCBP-211ENST00000523441 CAMPP49913 170 aa7.02□□□□□ -1.29
SDCBP-211ENST00000523441 Q5BKY6 102 aa7.02□□□□□ -1.29
SDCBP-211ENST00000523441 OR2D3Q8NGH3 330 aa7.02□□□□□ -1.29
SDCBP-211ENST00000523441 OR5A1Q8NGJ0 315 aa7.02□□□□□ -1.29
SDCBP-211ENST00000523441 MARVELD1Q9BSK0 173 aa7.02□□□□□ -1.29
SDCBP-211ENST00000523441 LINC00959A0A1B0GUT2 108 aa7.01□□□□□ -1.29
SDCBP-211ENST00000523441 APCSP02743 223 aa7.01□□□□□ -1.29
SDCBP-211ENST00000523441 NTF3P20783 257 aa7.01□□□□□ -1.29
SDCBP-211ENST00000523441 RPL39LQ96EH5 51 aaKnown RBP7.01□□□□□ -1.29
SDCBP-211ENST00000523441 BTF3L4Q96K17 158 aa7.01□□□□□ -1.29
SDCBP-211ENST00000523441 CAMK2N2Q96S95 79 aa7.01□□□□□ -1.29
SDCBP-211ENST00000523441 OPRPNQ99935 248 aaPredicted RBP7.01□□□□□ -1.29
SDCBP-211ENST00000523441 MLST8Q9BVC4 326 aa7.01□□□□□ -1.29
SDCBP-211ENST00000523441 BATF3Q9NR55 127 aa7.01□□□□□ -1.29
SDCBP-211ENST00000523441 FXYD6-FXYD2A0A087WZ82 144 aa7□□□□□ -1.29
SDCBP-211ENST00000523441 H0Y9J4 135 aa7□□□□□ -1.29
SDCBP-211ENST00000523441 PFDN1O60925 122 aa7□□□□□ -1.29
SDCBP-211ENST00000523441 TRGC1P0CF51 173 aa7□□□□□ -1.29
SDCBP-211ENST00000523441 MALP21145 153 aa7□□□□□ -1.29
SDCBP-211ENST00000523441 LYZL1Q6UWQ5 148 aa7□□□□□ -1.29
SDCBP-211ENST00000523441 S100ZQ8WXG8 99 aa7□□□□□ -1.29
SDCBP-211ENST00000523441 TMEM101Q96IK0 257 aa7□□□□□ -1.29
SDCBP-211ENST00000523441 ALG5Q9Y673 324 aa7□□□□□ -1.29
SDCBP-211ENST00000523441 IGLV1-50A0A075B6I6 118 aa6.99□□□□□ -1.29
SDCBP-211ENST00000523441 TRAV1-1A0A0B4J248 108 aa6.99□□□□□ -1.29
SDCBP-211ENST00000523441 S100A9P06702 114 aaKnown RBP6.99□□□□□ -1.29
SDCBP-211ENST00000523441 IGLC6P0CF74 106 aa6.99□□□□□ -1.29
SDCBP-211ENST00000523441 SS18Q15532 418 aa6.99□□□□□ -1.29
SDCBP-211ENST00000523441 TMUB2Q71RG4 321 aa6.99□□□□□ -1.29
SDCBP-211ENST00000523441 KRTAP11-1Q8IUC1 163 aa6.99□□□□□ -1.29
SDCBP-211ENST00000523441 GATD1Q8NB37 220 aa6.99□□□□□ -1.29
SDCBP-211ENST00000523441 ISOC2Q96AB3 205 aa6.99□□□□□ -1.29
SDCBP-211ENST00000523441 TCEAL7Q9BRU2 100 aa6.99□□□□□ -1.29
SDCBP-211ENST00000523441 FAM168BA1KXE4 195 aa6.98□□□□□ -1.29
SDCBP-211ENST00000523441 TWIST1Q15672 202 aa6.98□□□□□ -1.29
SDCBP-211ENST00000523441 FAM19A5Q7Z5A7 132 aaPredicted RBP6.98□□□□□ -1.29
SDCBP-211ENST00000523441 SFT2D1Q8WV19 159 aa6.98□□□□□ -1.29
SDCBP-211ENST00000523441 TMEM238LA0A1B0GVL6 79 aa6.97□□□□□ -1.29
SDCBP-211ENST00000523441 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.97□□□□□ -1.29
SDCBP-211ENST00000523441 APOMO95445 188 aa6.97□□□□□ -1.29
SDCBP-211ENST00000523441 RPL35P42766 123 aaKnown RBP6.97□□□□□ -1.29
SDCBP-211ENST00000523441 MEF2BQ02080 365 aaPredicted RBP6.97□□□□□ -1.29
SDCBP-211ENST00000523441 NUP35Q8NFH5 326 aa6.97□□□□□ -1.29
SDCBP-211ENST00000523441 FAM213BQ8TBF2 198 aa6.97□□□□□ -1.29
SDCBP-211ENST00000523441 EIF4EBP3O60516 100 aaPredicted RBP6.96□□□□□ -1.3
SDCBP-211ENST00000523441 IFNA1P01562 189 aa6.96□□□□□ -1.3
SDCBP-211ENST00000523441 KRTAP1-4P0C5Y4 121 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms