RNA–Protein interactions for RNA: ENST00000523270.1

CNOT8-223, Transcript of CCR4-NOT transcription complex subunit 8, human

TSL 4

Gene CNOT8, Length 575 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT8-223	ENST00000523270	NTN5	Q8WTR8	489 aa	Predicted RBP	13.52	□□□□□ -0.25
CNOT8-223	ENST00000523270	FRZB	Q92765	325 aa		13.52	□□□□□ -0.25
CNOT8-223	ENST00000523270	TMEM243	Q9BU79	118 aa		13.52	□□□□□ -0.25
CNOT8-223	ENST00000523270	COX11	Q9Y6N1	276 aa		13.52	□□□□□ -0.25
CNOT8-223	ENST00000523270	CRP	P02741	224 aa		13.51	□□□□□ -0.25
CNOT8-223	ENST00000523270	XG	P55808	180 aa		13.51	□□□□□ -0.25
CNOT8-223	ENST00000523270		Q0VG73	95 aa		13.51	□□□□□ -0.25
CNOT8-223	ENST00000523270	COTL1	Q14019	142 aa		13.51	□□□□□ -0.25
CNOT8-223	ENST00000523270	TMEM191A	Q9H0A3	160 aa		13.51	□□□□□ -0.25
CNOT8-223	ENST00000523270	IGLV4-60	A0A075B6I1	120 aa		13.5	□□□□□ -0.25
CNOT8-223	ENST00000523270	AMN1	Q8IY45	258 aa		13.5	□□□□□ -0.25
CNOT8-223	ENST00000523270	LINC00269	Q8N2A0	174 aa		13.5	□□□□□ -0.25
CNOT8-223	ENST00000523270	C20orf203	Q8NBC4	194 aa		13.5	□□□□□ -0.25
CNOT8-223	ENST00000523270	PRR34	Q9NV39	138 aa		13.5	□□□□□ -0.25
CNOT8-223	ENST00000523270	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	13.49	□□□□□ -0.25
CNOT8-223	ENST00000523270	RPS10	P46783	165 aa	Known RBP	13.49	□□□□□ -0.25
CNOT8-223	ENST00000523270	AMT	P48728	403 aa		13.49	□□□□□ -0.25
CNOT8-223	ENST00000523270	C1orf43	Q9BWL3	253 aa		13.49	□□□□□ -0.25
CNOT8-223	ENST00000523270	SMIM27	A0A1W2PRY6	76 aa		13.48	□□□□□ -0.25
CNOT8-223	ENST00000523270	SDHAF1	A6NFY7	115 aa		13.48	□□□□□ -0.25
CNOT8-223	ENST00000523270	RAB4A	P20338	218 aa		13.48	□□□□□ -0.25
CNOT8-223	ENST00000523270	HAMP	P81172	84 aa		13.48	□□□□□ -0.25
CNOT8-223	ENST00000523270	KRTAP26-1	Q6PEX3	210 aa		13.48	□□□□□ -0.25
CNOT8-223	ENST00000523270	NAT8B	Q9UHF3	227 aa		13.48	□□□□□ -0.25
CNOT8-223	ENST00000523270	SMKR1	H3BMG3	65 aa		13.47	□□□□□ -0.25
CNOT8-223	ENST00000523270	RIG	Q13278	110 aa		13.47	□□□□□ -0.25
CNOT8-223	ENST00000523270	FAT1	Q14517	4588 aa		13.46	□□□□□ -0.25
CNOT8-223	ENST00000523270	TRBV6-5	A0A0K0K1A5	114 aa		13.46	□□□□□ -0.25
CNOT8-223	ENST00000523270	NCR2	O95944	276 aa		13.46	□□□□□ -0.25
CNOT8-223	ENST00000523270	IFITM2	Q01629	132 aa		13.46	□□□□□ -0.25
CNOT8-223	ENST00000523270	MIA	Q16674	131 aa		13.46	□□□□□ -0.25
CNOT8-223	ENST00000523270		Q8N1X5	172 aa		13.46	□□□□□ -0.25
CNOT8-223	ENST00000523270		A0A1B0GUV1	79 aa		13.45	□□□□□ -0.26
CNOT8-223	ENST00000523270	HLA-DQA1	P01909	254 aa		13.45	□□□□□ -0.26
CNOT8-223	ENST00000523270	REG3A	Q06141	175 aa		13.45	□□□□□ -0.26
CNOT8-223	ENST00000523270	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	13.44	□□□□□ -0.26
CNOT8-223	ENST00000523270	IGKV2-29	A2NJV5	120 aa	Predicted RBP	13.44	□□□□□ -0.26
CNOT8-223	ENST00000523270	UBE2L6	O14933	153 aa		13.44	□□□□□ -0.26
CNOT8-223	ENST00000523270	RAB14	P61106	215 aa		13.44	□□□□□ -0.26
CNOT8-223	ENST00000523270	LINC01620	Q4KN68	170 aa		13.44	□□□□□ -0.26
CNOT8-223	ENST00000523270	FAM30A	Q9NZY2	134 aa		13.44	□□□□□ -0.26
CNOT8-223	ENST00000523270	IGLV10-54	A0A075B6I4	117 aa		13.43	□□□□□ -0.26
CNOT8-223	ENST00000523270	TSHB	P01222	138 aa		13.43	□□□□□ -0.26
CNOT8-223	ENST00000523270	MRAP2	Q96G30	205 aa		13.43	□□□□□ -0.26
CNOT8-223	ENST00000523270	TMEM70	Q9BUB7	260 aa		13.43	□□□□□ -0.26
CNOT8-223	ENST00000523270	ST20	Q9HBF5	79 aa		13.43	□□□□□ -0.26
CNOT8-223	ENST00000523270	APCS	P02743	223 aa		13.42	□□□□□ -0.26
CNOT8-223	ENST00000523270	CLLU1	Q5K131	121 aa		13.42	□□□□□ -0.26
CNOT8-223	ENST00000523270	TMEM242	Q9NWH2	141 aa		13.42	□□□□□ -0.26
CNOT8-223	ENST00000523270	USP17L23	D6RBM5	183 aa		13.41	□□□□□ -0.26
CNOT8-223	ENST00000523270		I3L3M4	83 aa		13.41	□□□□□ -0.26
CNOT8-223	ENST00000523270	PMCH	P20382	165 aa		13.41	□□□□□ -0.26
CNOT8-223	ENST00000523270	CAMP	P49913	170 aa		13.41	□□□□□ -0.26
CNOT8-223	ENST00000523270	POLR2K	P53803	58 aa	Known RBP	13.41	□□□□□ -0.26
CNOT8-223	ENST00000523270	MRPL54	Q6P161	138 aa	Known RBP	13.41	□□□□□ -0.26
CNOT8-223	ENST00000523270	NRAC	Q8N912	160 aa		13.41	□□□□□ -0.26
CNOT8-223	ENST00000523270	MRPL51	Q4U2R6	128 aa	Known RBP	13.4	□□□□□ -0.26
CNOT8-223	ENST00000523270	FAM104B	Q5XKR9	115 aa		13.4	□□□□□ -0.26
CNOT8-223	ENST00000523270	VPS13B	Q7Z7G8	4022 aa		13.4	□□□□□ -0.26
CNOT8-223	ENST00000523270		A0A1B0GXF2	115 aa		13.39	□□□□□ -0.27
CNOT8-223	ENST00000523270	FGF6	P10767	208 aa		13.38	□□□□□ -0.27
CNOT8-223	ENST00000523270	ESD	P10768	282 aa		13.38	□□□□□ -0.27
CNOT8-223	ENST00000523270	TRBV27	A0A0K0K1C4	114 aa		13.37	□□□□□ -0.27
CNOT8-223	ENST00000523270	PRSS1	P07477	247 aa		13.37	□□□□□ -0.27
CNOT8-223	ENST00000523270	RNASEK	Q6P5S7	137 aa	Known RBP	13.37	□□□□□ -0.27
CNOT8-223	ENST00000523270	IGKV3OR2-268	A0A0C4DH90	116 aa		13.36	□□□□□ -0.27
CNOT8-223	ENST00000523270	SMR3B	P02814	79 aa	Predicted RBP	13.36	□□□□□ -0.27
CNOT8-223	ENST00000523270	AMMECR1L	Q6DCA0	310 aa		13.36	□□□□□ -0.27
CNOT8-223	ENST00000523270		Q6ZSA8	131 aa		13.36	□□□□□ -0.27
CNOT8-223	ENST00000523270	TRAV8-4	A0A0B4J246	113 aa		13.35	□□□□□ -0.27
CNOT8-223	ENST00000523270		A0A1B0GW15	77 aa		13.35	□□□□□ -0.27
CNOT8-223	ENST00000523270	HBB	P68871	147 aa		13.35	□□□□□ -0.27
CNOT8-223	ENST00000523270		H7C423	109 aa		13.34	□□□□□ -0.27
CNOT8-223	ENST00000523270	ADCYAP1	P18509	176 aa		13.34	□□□□□ -0.27
CNOT8-223	ENST00000523270	SUMO2	P61956	95 aa	Known RBP	13.34	□□□□□ -0.27
CNOT8-223	ENST00000523270	C14orf177	Q52M58	125 aa		13.34	□□□□□ -0.27
CNOT8-223	ENST00000523270	PNRC1	Q12796	327 aa	Predicted RBP	13.33	□□□□□ -0.28
CNOT8-223	ENST00000523270	PPP1R2P9	O14990	202 aa		13.32	□□□□□ -0.28
CNOT8-223	ENST00000523270	GAGE12H	A6NDE8	117 aa		13.31	□□□□□ -0.28
CNOT8-223	ENST00000523270		D6R8Y8	96 aa		13.31	□□□□□ -0.28
CNOT8-223	ENST00000523270	VCY	O14598	125 aa		13.31	□□□□□ -0.28
CNOT8-223	ENST00000523270	CKS2	P33552	79 aa		13.31	□□□□□ -0.28
CNOT8-223	ENST00000523270		Q5VSD8	79 aa		13.31	□□□□□ -0.28
CNOT8-223	ENST00000523270	C7orf77	A4D0Y5	90 aa		13.3	□□□□□ -0.28
CNOT8-223	ENST00000523270	EPM2A	B3EWF7	344 aa		13.3	□□□□□ -0.28
CNOT8-223	ENST00000523270	PPP1R17	O96001	155 aa		13.3	□□□□□ -0.28
CNOT8-223	ENST00000523270	ZNF25	P17030	456 aa	Predicted RBP	13.3	□□□□□ -0.28
CNOT8-223	ENST00000523270	TRBV24-1	A0A075B6N3	115 aa		13.29	□□□□□ -0.28
CNOT8-223	ENST00000523270	LINC00862	A6NCI5	91 aa		13.29	□□□□□ -0.28
CNOT8-223	ENST00000523270	TNFRSF6B	O95407	300 aa		13.29	□□□□□ -0.28
CNOT8-223	ENST00000523270	NPY	P01303	97 aa		13.29	□□□□□ -0.28
CNOT8-223	ENST00000523270	MT-ND4L	P03901	98 aa		13.29	□□□□□ -0.28
CNOT8-223	ENST00000523270	S100A8	P05109	93 aa		13.29	□□□□□ -0.28
CNOT8-223	ENST00000523270	ATP5L2	Q7Z4Y8	100 aa		13.29	□□□□□ -0.28
CNOT8-223	ENST00000523270	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	13.29	□□□□□ -0.28
CNOT8-223	ENST00000523270	ANAPC16	Q96DE5	110 aa		13.29	□□□□□ -0.28
CNOT8-223	ENST00000523270		F8W036	122 aa		13.28	□□□□□ -0.28
CNOT8-223	ENST00000523270	FCER1G	P30273	86 aa		13.28	□□□□□ -0.28
CNOT8-223	ENST00000523270	MRPL52	Q86TS9	123 aa	Known RBP	13.28	□□□□□ -0.28
CNOT8-223	ENST00000523270	OR5A1	Q8NGJ0	315 aa		13.28	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms