RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 SIX6O95475 246 aa8.09□□□□□ -1.11
NKX3-1-202ENST00000523261 CXCL1P09341 107 aa8.09□□□□□ -1.11
NKX3-1-202ENST00000523261 OR5AL1P0C617 328 aa8.09□□□□□ -1.11
NKX3-1-202ENST00000523261 SSTP61278 116 aa8.09□□□□□ -1.11
NKX3-1-202ENST00000523261 RPL18AQ02543 176 aaKnown RBP8.09□□□□□ -1.11
NKX3-1-202ENST00000523261 SUMO4Q6EEV6 95 aa8.09□□□□□ -1.11
NKX3-1-202ENST00000523261 TSKUQ8WUA8 353 aa8.09□□□□□ -1.11
NKX3-1-202ENST00000523261 ISOC2Q96AB3 205 aa8.09□□□□□ -1.11
NKX3-1-202ENST00000523261 AP1S3Q96PC3 154 aa8.09□□□□□ -1.11
NKX3-1-202ENST00000523261 KRTAP4-1Q9BYQ7 146 aa8.09□□□□□ -1.11
NKX3-1-202ENST00000523261 NUDT15Q9NV35 164 aa8.09□□□□□ -1.11
NKX3-1-202ENST00000523261 IGLV4-69A0A075B6H9 119 aa8.08□□□□□ -1.12
NKX3-1-202ENST00000523261 IGLV7-46A0A075B6I9 117 aa8.08□□□□□ -1.12
NKX3-1-202ENST00000523261 CCL25O15444 150 aa8.08□□□□□ -1.12
NKX3-1-202ENST00000523261 MGPP08493 103 aa8.08□□□□□ -1.12
NKX3-1-202ENST00000523261 COTL1Q14019 142 aa8.08□□□□□ -1.12
NKX3-1-202ENST00000523261 A0A087X002 238 aa8.07□□□□□ -1.12
NKX3-1-202ENST00000523261 PLA2G10O15496 165 aa8.07□□□□□ -1.12
NKX3-1-202ENST00000523261 CXorf1O96002 111 aa8.07□□□□□ -1.12
NKX3-1-202ENST00000523261 AMMECR1LQ6DCA0 310 aa8.07□□□□□ -1.12
NKX3-1-202ENST00000523261 OR5A1Q8NGJ0 315 aa8.07□□□□□ -1.12
NKX3-1-202ENST00000523261 HIST1H2BAQ96A08 127 aa8.07□□□□□ -1.12
NKX3-1-202ENST00000523261 RASL11AQ6T310 242 aa8.06□□□□□ -1.12
NKX3-1-202ENST00000523261 FMC1Q96HJ9 113 aa8.06□□□□□ -1.12
NKX3-1-202ENST00000523261 LINC00959A0A1B0GUT2 108 aa8.05□□□□□ -1.12
NKX3-1-202ENST00000523261 FAM168BA1KXE4 195 aa8.05□□□□□ -1.12
NKX3-1-202ENST00000523261 NOL3O60936 208 aaKnown RBP8.05□□□□□ -1.12
NKX3-1-202ENST00000523261 LTAP01374 205 aa8.05□□□□□ -1.12
NKX3-1-202ENST00000523261 IL7P13232 177 aa8.05□□□□□ -1.12
NKX3-1-202ENST00000523261 RNASEKQ6P5S7 137 aaKnown RBP8.05□□□□□ -1.12
NKX3-1-202ENST00000523261 NIT2Q9NQR4 276 aa8.05□□□□□ -1.12
NKX3-1-202ENST00000523261 LYRM1O43325 122 aa8.04□□□□□ -1.12
NKX3-1-202ENST00000523261 H2AFB2P0C5Z0 115 aa8.04□□□□□ -1.12
NKX3-1-202ENST00000523261 UBE2G2P60604 165 aa8.04□□□□□ -1.12
NKX3-1-202ENST00000523261 UBE2G1P62253 170 aa8.04□□□□□ -1.12
NKX3-1-202ENST00000523261 EIF5AL1Q6IS14 154 aaKnown RBP8.04□□□□□ -1.12
NKX3-1-202ENST00000523261 TYMSOSQ8TAI1 123 aa8.04□□□□□ -1.12
NKX3-1-202ENST00000523261 CAMK2N2Q96S95 79 aa8.04□□□□□ -1.12
NKX3-1-202ENST00000523261 OPRPNQ99935 248 aaPredicted RBP8.04□□□□□ -1.12
NKX3-1-202ENST00000523261 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.03□□□□□ -1.12
NKX3-1-202ENST00000523261 IGKV2-29A2NJV5 120 aaPredicted RBP8.03□□□□□ -1.12
NKX3-1-202ENST00000523261 ASB16-AS1Q495Z4 193 aa8.03□□□□□ -1.12
NKX3-1-202ENST00000523261 LCE2CQ5TA81 110 aa8.03□□□□□ -1.12
NKX3-1-202ENST00000523261 CD164L2Q6UWJ8 174 aa8.03□□□□□ -1.12
NKX3-1-202ENST00000523261 FAM74A7A6NL05 159 aa8.02□□□□□ -1.13
NKX3-1-202ENST00000523261 PPP1R1CQ8WVI7 109 aa8.02□□□□□ -1.13
NKX3-1-202ENST00000523261 H7C423 109 aa8.01□□□□□ -1.13
NKX3-1-202ENST00000523261 BCL2L11O43521 198 aa8.01□□□□□ -1.13
NKX3-1-202ENST00000523261 ZNF861PO60384 105 aa8.01□□□□□ -1.13
NKX3-1-202ENST00000523261 NTF3P20783 257 aa8.01□□□□□ -1.13
NKX3-1-202ENST00000523261 Q6ZNX1 250 aa8.01□□□□□ -1.13
NKX3-1-202ENST00000523261 LINC00173Q6ZV60 143 aa8.01□□□□□ -1.13
NKX3-1-202ENST00000523261 FAM19A5Q7Z5A7 132 aaPredicted RBP8.01□□□□□ -1.13
NKX3-1-202ENST00000523261 KRTAP7-1Q8IUC3 87 aa8.01□□□□□ -1.13
NKX3-1-202ENST00000523261 C2orf48Q96LS8 159 aa8.01□□□□□ -1.13
NKX3-1-202ENST00000523261 NKX6-2Q9C056 277 aaPredicted RBP8.01□□□□□ -1.13
NKX3-1-202ENST00000523261 ATP6V0CP27449 155 aa8□□□□□ -1.13
NKX3-1-202ENST00000523261 ACTR3CQ9C0K3 210 aaPredicted RBP8□□□□□ -1.13
NKX3-1-202ENST00000523261 PPDPFQ9H3Y8 114 aa8□□□□□ -1.13
NKX3-1-202ENST00000523261 C19orf71A6NCJ1 209 aa7.99□□□□□ -1.13
NKX3-1-202ENST00000523261 MPC2O95563 127 aa7.99□□□□□ -1.13
NKX3-1-202ENST00000523261 MBP02144 154 aa7.99□□□□□ -1.13
NKX3-1-202ENST00000523261 ZNF25P17030 456 aaPredicted RBP7.99□□□□□ -1.13
NKX3-1-202ENST00000523261 UBE2BP63146 152 aa7.99□□□□□ -1.13
NKX3-1-202ENST00000523261 SS18Q15532 418 aa7.99□□□□□ -1.13
NKX3-1-202ENST00000523261 RNF151Q2KHN1 245 aa7.99□□□□□ -1.13
NKX3-1-202ENST00000523261 PSMG3Q9BT73 122 aaPredicted RBP7.99□□□□□ -1.13
NKX3-1-202ENST00000523261 ESDP10768 282 aa7.98□□□□□ -1.13
NKX3-1-202ENST00000523261 H2BFSP57053 126 aa7.98□□□□□ -1.13
NKX3-1-202ENST00000523261 M0QXV9 152 aa7.97□□□□□ -1.13
NKX3-1-202ENST00000523261 NCR2O95944 276 aa7.97□□□□□ -1.13
NKX3-1-202ENST00000523261 CFC1BP0CG36 223 aa7.97□□□□□ -1.13
NKX3-1-202ENST00000523261 MALP21145 153 aa7.97□□□□□ -1.13
NKX3-1-202ENST00000523261 SERF2P84101 59 aa7.97□□□□□ -1.13
NKX3-1-202ENST00000523261 ZNF726P1Q15940 193 aa7.97□□□□□ -1.13
NKX3-1-202ENST00000523261 COX7A2LO14548 114 aa7.96□□□□□ -1.14
NKX3-1-202ENST00000523261 PET100P0DJ07 73 aa7.96□□□□□ -1.14
NKX3-1-202ENST00000523261 LORP23490 312 aaPredicted RBP7.96□□□□□ -1.14
NKX3-1-202ENST00000523261 MT1HP80294 61 aa7.96□□□□□ -1.14
NKX3-1-202ENST00000523261 KRTAP13-2Q52LG2 175 aa7.96□□□□□ -1.14
NKX3-1-202ENST00000523261 TNFSF18Q9UNG2 199 aa7.96□□□□□ -1.14
NKX3-1-202ENST00000523261 CCDC160A6NGH7 325 aa7.95□□□□□ -1.14
NKX3-1-202ENST00000523261 TSHBP01222 138 aa7.95□□□□□ -1.14
NKX3-1-202ENST00000523261 APCSP02743 223 aa7.95□□□□□ -1.14
NKX3-1-202ENST00000523261 AKR1C3P42330 323 aa7.95□□□□□ -1.14
NKX3-1-202ENST00000523261 LINC00304Q8N9R0 145 aa7.95□□□□□ -1.14
NKX3-1-202ENST00000523261 TMEM101Q96IK0 257 aa7.95□□□□□ -1.14
NKX3-1-202ENST00000523261 BTF3L4Q96K17 158 aa7.95□□□□□ -1.14
NKX3-1-202ENST00000523261 IGLC6P0CF74 106 aa7.94□□□□□ -1.14
NKX3-1-202ENST00000523261 IMMP2LQ96T52 175 aa7.94□□□□□ -1.14
NKX3-1-202ENST00000523261 TPPP3Q9BW30 176 aa7.94□□□□□ -1.14
NKX3-1-202ENST00000523261 CTXND1A0A1B0GTU2 59 aa7.93□□□□□ -1.14
NKX3-1-202ENST00000523261 G3V3Q6 166 aa7.93□□□□□ -1.14
NKX3-1-202ENST00000523261 TLX1NBP0CAT3 122 aa7.93□□□□□ -1.14
NKX3-1-202ENST00000523261 SPAG11BQ08648 103 aa7.93□□□□□ -1.14
NKX3-1-202ENST00000523261 KRTAP19-2Q3LHN2 52 aa7.93□□□□□ -1.14
NKX3-1-202ENST00000523261 TCEAL7Q9BRU2 100 aa7.93□□□□□ -1.14
NKX3-1-202ENST00000523261 MRPL35Q9NZE8 188 aaKnown RBP7.93□□□□□ -1.14
NKX3-1-202ENST00000523261 FAM240BA0A1B0GVZ2 78 aa7.92□□□□□ -1.14
NKX3-1-202ENST00000523261 KRTAP10-6P60371 365 aaPredicted RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 195.3 ms