RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 C15orf53Q8NAA6 179 aa9.25□□□□□ -0.93
CLK4-210ENST00000522136 PMCHL1Q16048 86 aa9.24□□□□□ -0.93
CLK4-210ENST00000522136 GTSF1LQ9H1H1 148 aa9.24□□□□□ -0.93
CLK4-210ENST00000522136 LYPD5Q6UWN5 251 aa9.24□□□□□ -0.93
CLK4-210ENST00000522136 AP5S1Q9NUS5 200 aa9.24□□□□□ -0.93
CLK4-210ENST00000522136 APLNQ9ULZ1 77 aa9.24□□□□□ -0.93
CLK4-210ENST00000522136 LINC01546A6NGU7 62 aa9.23□□□□□ -0.93
CLK4-210ENST00000522136 LAGE3Q14657 143 aa9.23□□□□□ -0.93
CLK4-210ENST00000522136 ESRGQ1W209 222 aa9.23□□□□□ -0.93
CLK4-210ENST00000522136 SH2D6Q7Z4S9 175 aa9.23□□□□□ -0.93
CLK4-210ENST00000522136 KLK5Q9Y337 293 aaPredicted RBP9.23□□□□□ -0.93
CLK4-210ENST00000522136 TRBV6-8A0A0A6YYG3 113 aa9.23□□□□□ -0.93
CLK4-210ENST00000522136 AMTP48728 403 aa9.23□□□□□ -0.93
CLK4-210ENST00000522136 CHCHD7Q9BUK0 85 aa9.23□□□□□ -0.93
CLK4-210ENST00000522136 COA6Q5JTJ3 125 aaKnown RBP9.22□□□□□ -0.93
CLK4-210ENST00000522136 FAM19A2Q8N3H0 131 aa9.22□□□□□ -0.93
CLK4-210ENST00000522136 CHCHD1Q96BP2 118 aaKnown RBP9.22□□□□□ -0.93
CLK4-210ENST00000522136 CSMD3Q7Z407 3707 aa9.21□□□□□ -0.94
CLK4-210ENST00000522136 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.21□□□□□ -0.94
CLK4-210ENST00000522136 A0A096LNJ9 63 aa9.21□□□□□ -0.94
CLK4-210ENST00000522136 IGHV1-24A0A0C4DH33 117 aa9.21□□□□□ -0.94
CLK4-210ENST00000522136 IGKV2-29A2NJV5 120 aaPredicted RBP9.21□□□□□ -0.94
CLK4-210ENST00000522136 HSBP1O75506 76 aa9.21□□□□□ -0.94
CLK4-210ENST00000522136 S100A6P06703 90 aa9.21□□□□□ -0.94
CLK4-210ENST00000522136 ESDP10768 282 aa9.21□□□□□ -0.94
CLK4-210ENST00000522136 RPL39P62891 51 aaKnown RBP9.21□□□□□ -0.94
CLK4-210ENST00000522136 PDZD11Q5EBL8 140 aa9.21□□□□□ -0.94
CLK4-210ENST00000522136 TRBV25-1A0A075B6N4 114 aa9.2□□□□□ -0.94
CLK4-210ENST00000522136 BTF3P20290 206 aaKnown RBP9.2□□□□□ -0.94
CLK4-210ENST00000522136 ORMDL2Q53FV1 153 aa9.2□□□□□ -0.94
CLK4-210ENST00000522136 DNAH7Q8WXX0 4024 aa9.19□□□□□ -0.94
CLK4-210ENST00000522136 K7EMI3 77 aa9.19□□□□□ -0.94
CLK4-210ENST00000522136 SNRPEP62304 92 aaKnown RBP9.19□□□□□ -0.94
CLK4-210ENST00000522136 TMEM97Q5BJF2 176 aa9.19□□□□□ -0.94
CLK4-210ENST00000522136 LELP1Q5T871 98 aa9.19□□□□□ -0.94
CLK4-210ENST00000522136 C20orf203Q8NBC4 194 aa9.19□□□□□ -0.94
CLK4-210ENST00000522136 TMEM243Q9BU79 118 aa9.19□□□□□ -0.94
CLK4-210ENST00000522136 CHCHD5Q9BSY4 110 aa9.19□□□□□ -0.94
CLK4-210ENST00000522136 LINC00588Q9Y4M8 146 aa9.19□□□□□ -0.94
CLK4-210ENST00000522136 TIRAPP58753 221 aa9.18□□□□□ -0.94
CLK4-210ENST00000522136 GAGE6Q13070 117 aa9.18□□□□□ -0.94
CLK4-210ENST00000522136 C2orf66Q6UXQ4 117 aa9.18□□□□□ -0.94
CLK4-210ENST00000522136 STARD9Q9P2P6 4700 aa9.17□□□□□ -0.94
CLK4-210ENST00000522136 C5orf52A6NGY3 159 aa9.17□□□□□ -0.94
CLK4-210ENST00000522136 HBDP02042 147 aa9.17□□□□□ -0.94
CLK4-210ENST00000522136 CASC10Q5T4H9 136 aa9.17□□□□□ -0.94
CLK4-210ENST00000522136 WFDC10BQ8IUB3 73 aa9.17□□□□□ -0.94
CLK4-210ENST00000522136 Q8N3U1 123 aa9.17□□□□□ -0.94
CLK4-210ENST00000522136 TENM2Q9NT68 2774 aa9.16□□□□□ -0.94
CLK4-210ENST00000522136 CCL18P55774 89 aa9.16□□□□□ -0.94
CLK4-210ENST00000522136 HIST3H2BBQ8N257 126 aa9.16□□□□□ -0.94
CLK4-210ENST00000522136 TOMM6Q96B49 74 aa9.16□□□□□ -0.94
CLK4-210ENST00000522136 CYSLTR1Q9Y271 337 aa9.16□□□□□ -0.94
CLK4-210ENST00000522136 TMEM262E9PQX1 116 aa9.15□□□□□ -0.94
CLK4-210ENST00000522136 UBE2L6O14933 153 aa9.15□□□□□ -0.94
CLK4-210ENST00000522136 FABP4P15090 132 aa9.15□□□□□ -0.94
CLK4-210ENST00000522136 TCTAP57738 103 aa9.15□□□□□ -0.94
CLK4-210ENST00000522136 LINC00173Q6ZV60 143 aa9.15□□□□□ -0.94
CLK4-210ENST00000522136 TRAV8-6A0A0B4J262 113 aa9.15□□□□□ -0.95
CLK4-210ENST00000522136 FGF6P10767 208 aa9.15□□□□□ -0.95
CLK4-210ENST00000522136 OPRPNQ99935 248 aaPredicted RBP9.15□□□□□ -0.95
CLK4-210ENST00000522136 C3orf84H3BNL1 204 aa9.14□□□□□ -0.95
CLK4-210ENST00000522136 Q8N976 141 aa9.14□□□□□ -0.95
CLK4-210ENST00000522136 TMEM18Q96B42 140 aa9.14□□□□□ -0.95
CLK4-210ENST00000522136 UBE2D4Q9Y2X8 147 aa9.14□□□□□ -0.95
CLK4-210ENST00000522136 MRPS16Q9Y3D3 137 aaKnown RBP9.14□□□□□ -0.95
CLK4-210ENST00000522136 DYNC2H1Q8NCM8 4307 aaKnown RBP9.14□□□□□ -0.95
CLK4-210ENST00000522136 IFITM10A6NMD0 228 aa9.13□□□□□ -0.95
CLK4-210ENST00000522136 MPV17L2Q567V2 206 aa9.13□□□□□ -0.95
CLK4-210ENST00000522136 SCGB3A1Q96QR1 104 aa9.13□□□□□ -0.95
CLK4-210ENST00000522136 IGLV4-60A0A075B6I1 120 aa9.13□□□□□ -0.95
CLK4-210ENST00000522136 IGIPA6NJ69 53 aa9.13□□□□□ -0.95
CLK4-210ENST00000522136 G0S2P27469 103 aa9.13□□□□□ -0.95
CLK4-210ENST00000522136 AMMECR1LQ6DCA0 310 aa9.13□□□□□ -0.95
CLK4-210ENST00000522136 UBE2DNLQ8IWF7 75 aa9.13□□□□□ -0.95
CLK4-210ENST00000522136 FAM104AQ969W3 186 aa9.13□□□□□ -0.95
CLK4-210ENST00000522136 H7C423 109 aa9.12□□□□□ -0.95
CLK4-210ENST00000522136 IGHV3-30P01768 117 aa9.12□□□□□ -0.95
CLK4-210ENST00000522136 IGHV3-33P01772 117 aa9.12□□□□□ -0.95
CLK4-210ENST00000522136 IGHV3-30-3P0DP02 117 aa9.12□□□□□ -0.95
CLK4-210ENST00000522136 IGHV3-30-5P0DP03 117 aa9.12□□□□□ -0.95
CLK4-210ENST00000522136 RBX1P62877 108 aa9.12□□□□□ -0.95
CLK4-210ENST00000522136 RNASE13Q5GAN3 156 aaKnown RBP9.12□□□□□ -0.95
CLK4-210ENST00000522136 LEPROTL1O95214 131 aa9.12□□□□□ -0.95
CLK4-210ENST00000522136 S100A2P29034 98 aa9.12□□□□□ -0.95
CLK4-210ENST00000522136 ZC2HC1BQ5TFG8 222 aa9.12□□□□□ -0.95
CLK4-210ENST00000522136 ERASQ7Z444 233 aa9.12□□□□□ -0.95
CLK4-210ENST00000522136 MRPL52Q86TS9 123 aaKnown RBP9.12□□□□□ -0.95
CLK4-210ENST00000522136 HIST1H2BLQ99880 126 aa9.12□□□□□ -0.95
CLK4-210ENST00000522136 DGAT2L7PQ6IED9 249 aa9.11□□□□□ -0.95
CLK4-210ENST00000522136 Q6ZUT4 128 aa9.11□□□□□ -0.95
CLK4-210ENST00000522136 KRTAP3-3Q9BYR6 98 aa9.11□□□□□ -0.95
CLK4-210ENST00000522136 KRTAP3-2Q9BYR7 98 aa9.11□□□□□ -0.95
CLK4-210ENST00000522136 PLECQ15149 4684 aaKnown RBP9.11□□□□□ -0.95
CLK4-210ENST00000522136 A0A087WX48 190 aa9.1□□□□□ -0.95
CLK4-210ENST00000522136 OR5A1Q8NGJ0 315 aa9.1□□□□□ -0.95
CLK4-210ENST00000522136 UPK3BQ9BT76 320 aa9.1□□□□□ -0.95
CLK4-210ENST00000522136 TIMM21Q9BVV7 248 aa9.1□□□□□ -0.95
CLK4-210ENST00000522136 SPANXA1Q9NS26 97 aa9.1□□□□□ -0.95
CLK4-210ENST00000522136 PYGO1Q9Y3Y4 419 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms