RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 IGKV2D-24A0A075B6R9 120 aa10.39□□□□□ -0.75
SYNPO-205ENST00000522122 A0A0B4J2C4 111 aa10.39□□□□□ -0.75
SYNPO-205ENST00000522122 K7EQG2 157 aa10.39□□□□□ -0.75
SYNPO-205ENST00000522122 Q8N6K4 173 aa10.39□□□□□ -0.75
SYNPO-205ENST00000522122 ZFAND2AQ8N6M9 145 aa10.39□□□□□ -0.75
SYNPO-205ENST00000522122 HHLA3Q9XRX5 114 aa10.39□□□□□ -0.75
SYNPO-205ENST00000522122 C20orf173Q96LM9 149 aa10.39□□□□□ -0.75
SYNPO-205ENST00000522122 SPART-AS1P0CW21 52 aa10.39□□□□□ -0.75
SYNPO-205ENST00000522122 CITED1Q99966 193 aa10.39□□□□□ -0.75
SYNPO-205ENST00000522122 MRGPRG-AS1Q2M3A8 158 aa10.39□□□□□ -0.75
SYNPO-205ENST00000522122 Q6ZUT4 128 aa10.39□□□□□ -0.75
SYNPO-205ENST00000522122 MAPKAPK5-AS1Q8N8E1 139 aa10.39□□□□□ -0.75
SYNPO-205ENST00000522122 ARHGAP32A7KAX9 2087 aa10.38□□□□□ -0.75
SYNPO-205ENST00000522122 CENPFP49454 3210 aa10.38□□□□□ -0.75
SYNPO-205ENST00000522122 TCL1BO95988 128 aa10.38□□□□□ -0.75
SYNPO-205ENST00000522122 C1orf43Q9BWL3 253 aa10.38□□□□□ -0.75
SYNPO-205ENST00000522122 COX8CQ7Z4L0 72 aa10.38□□□□□ -0.75
SYNPO-205ENST00000522122 MIR7-3HGQ8N6C7 128 aa10.38□□□□□ -0.75
SYNPO-205ENST00000522122 NRACQ8N912 160 aa10.38□□□□□ -0.75
SYNPO-205ENST00000522122 TMEM263Q8WUH6 116 aaKnown RBP10.38□□□□□ -0.75
SYNPO-205ENST00000522122 MAP6D1Q9H9H5 199 aa10.38□□□□□ -0.75
SYNPO-205ENST00000522122 A0A0J9YXY3 114 aa10.38□□□□□ -0.75
SYNPO-205ENST00000522122 P0DMU3 169 aa10.38□□□□□ -0.75
SYNPO-205ENST00000522122 FAM231AP0DMU4 169 aa10.38□□□□□ -0.75
SYNPO-205ENST00000522122 FAM231CP0DMU5 169 aa10.38□□□□□ -0.75
SYNPO-205ENST00000522122 ESM1Q9NQ30 184 aa10.37□□□□□ -0.75
SYNPO-205ENST00000522122 CAMK2N2Q96S95 79 aa10.37□□□□□ -0.75
SYNPO-205ENST00000522122 MIAQ16674 131 aa10.37□□□□□ -0.75
SYNPO-205ENST00000522122 LECT2O14960 151 aa10.36□□□□□ -0.75
SYNPO-205ENST00000522122 SS18L2Q9UHA2 77 aa10.36□□□□□ -0.75
SYNPO-205ENST00000522122 A0A096LNJ9 63 aa10.36□□□□□ -0.75
SYNPO-205ENST00000522122 C19orf84I3L1E1 186 aa10.36□□□□□ -0.75
SYNPO-205ENST00000522122 NFE4Q86UQ8 179 aa10.36□□□□□ -0.75
SYNPO-205ENST00000522122 SPANXCQ9NY87 97 aa10.36□□□□□ -0.75
SYNPO-205ENST00000522122 PCSK5Q92824 1860 aa10.35□□□□□ -0.75
SYNPO-205ENST00000522122 FAM236AA0A1B0GUQ0 79 aa10.35□□□□□ -0.75
SYNPO-205ENST00000522122 FAM236BA0A1B0GV22 79 aa10.35□□□□□ -0.75
SYNPO-205ENST00000522122 IGHV4-4A0A075B6R2 117 aa10.35□□□□□ -0.75
SYNPO-205ENST00000522122 CITED2Q99967 270 aaPredicted RBP10.35□□□□□ -0.75
SYNPO-205ENST00000522122 TET2Q6N021 2002 aaPredicted RBP10.35□□□□□ -0.75
SYNPO-205ENST00000522122 IGKV3D-7A0A0C4DH55 119 aa10.35□□□□□ -0.75
SYNPO-205ENST00000522122 C11orf71Q6IPW1 123 aa10.35□□□□□ -0.75
SYNPO-205ENST00000522122 ZMAT4Q9H898 229 aa10.35□□□□□ -0.75
SYNPO-205ENST00000522122 Q9HAA7 133 aa10.35□□□□□ -0.75
SYNPO-205ENST00000522122 CEP350Q5VT06 3117 aa10.34□□□□□ -0.75
SYNPO-205ENST00000522122 ZNF22P17026 224 aaPredicted RBP10.34□□□□□ -0.75
SYNPO-205ENST00000522122 GAS8-AS1O95177 125 aa10.34□□□□□ -0.75
SYNPO-205ENST00000522122 C11orf21Q9P2W6 132 aa10.34□□□□□ -0.75
SYNPO-205ENST00000522122 IGLV4-3A0A075B6K6 122 aa10.33□□□□□ -0.76
SYNPO-205ENST00000522122 ATOX1O00244 68 aa10.33□□□□□ -0.76
SYNPO-205ENST00000522122 CXCL5P42830 114 aa10.33□□□□□ -0.76
SYNPO-205ENST00000522122 JMJD7-PLA2G4BH0Y9G9 81 aa10.33□□□□□ -0.76
SYNPO-205ENST00000522122 CDKN2A-AS1Q9UH64 79 aa10.33□□□□□ -0.76
SYNPO-205ENST00000522122 PCNTO95613 3336 aa10.32□□□□□ -0.76
SYNPO-205ENST00000522122 M0QY20 66 aa10.32□□□□□ -0.76
SYNPO-205ENST00000522122 DEFB105AQ8NG35 78 aa10.32□□□□□ -0.76
SYNPO-205ENST00000522122 IGHV3-30P01768 117 aa10.32□□□□□ -0.76
SYNPO-205ENST00000522122 IGHV3-33P01772 117 aa10.32□□□□□ -0.76
SYNPO-205ENST00000522122 IGHV3-30-5P0DP03 117 aa10.32□□□□□ -0.76
SYNPO-205ENST00000522122 Q6ZTI0 123 aa10.32□□□□□ -0.76
SYNPO-205ENST00000522122 PRO0255Q9UI72 69 aa10.32□□□□□ -0.76
SYNPO-205ENST00000522122 A0A1B0GX51 115 aa10.32□□□□□ -0.76
SYNPO-205ENST00000522122 hADV29S1A0JD25 119 aa10.32□□□□□ -0.76
SYNPO-205ENST00000522122 DEFB135Q30KP9 77 aa10.31□□□□□ -0.76
SYNPO-205ENST00000522122 TMEM223A0PJW6 202 aa10.31□□□□□ -0.76
SYNPO-205ENST00000522122 TRBV27A0A0K0K1C4 114 aa10.3□□□□□ -0.76
SYNPO-205ENST00000522122 CLPSL1A2RUU4 121 aa10.3□□□□□ -0.76
SYNPO-205ENST00000522122 SPAG11BQ08648 103 aa10.3□□□□□ -0.76
SYNPO-205ENST00000522122 SPATA25Q9BR10 227 aa10.3□□□□□ -0.76
SYNPO-205ENST00000522122 LINC00467Q9BRT7 94 aa10.3□□□□□ -0.76
SYNPO-205ENST00000522122 NDUFA1O15239 70 aa10.3□□□□□ -0.76
SYNPO-205ENST00000522122 ETDCA0A1B0GVM5 59 aa10.3□□□□□ -0.76
SYNPO-205ENST00000522122 DEFB114Q30KQ6 69 aa10.3□□□□□ -0.76
SYNPO-205ENST00000522122 PSMG3-AS1Q96PY0 264 aa10.3□□□□□ -0.76
SYNPO-205ENST00000522122 FUSP35637 526 aaKnown RBP eCLIP10.29□□□□□ -0.76
SYNPO-205ENST00000522122 HIST2H2BDQ6DRA6 164 aa10.29□□□□□ -0.76
SYNPO-205ENST00000522122 SMIM20Q8N5G0 67 aa10.29□□□□□ -0.76
SYNPO-205ENST00000522122 TLN2Q9Y4G6 2542 aa10.29□□□□□ -0.76
SYNPO-205ENST00000522122 F8W735 103 aaPredicted RBP10.29□□□□□ -0.76
SYNPO-205ENST00000522122 Q6YL49 198 aa10.29□□□□□ -0.76
SYNPO-205ENST00000522122 USP9XQ93008 2570 aaPredicted RBP10.29□□□□□ -0.76
SYNPO-205ENST00000522122 TRBV6-5A0A0K0K1A5 114 aa10.29□□□□□ -0.76
SYNPO-205ENST00000522122 DEFB4AO15263 64 aa10.29□□□□□ -0.76
SYNPO-205ENST00000522122 PRR9Q5T870 116 aa10.29□□□□□ -0.76
SYNPO-205ENST00000522122 LINC01546A6NGU7 62 aa10.29□□□□□ -0.76
SYNPO-205ENST00000522122 RNASE3P12724 160 aaKnown RBP10.29□□□□□ -0.76
SYNPO-205ENST00000522122 RBM3P98179 157 aaKnown RBP10.29□□□□□ -0.76
SYNPO-205ENST00000522122 KLK12Q9UKR0 248 aa10.29□□□□□ -0.76
SYNPO-205ENST00000522122 DNAJC9-AS1A6NH13 148 aa10.28□□□□□ -0.76
SYNPO-205ENST00000522122 LINC00643Q86TS7 51 aa10.28□□□□□ -0.76
SYNPO-205ENST00000522122 H3BQ85 93 aa10.28□□□□□ -0.76
SYNPO-205ENST00000522122 TRAV26-1A0A087WT03 109 aa10.27□□□□□ -0.76
SYNPO-205ENST00000522122 NCR3O14931 201 aa10.27□□□□□ -0.76
SYNPO-205ENST00000522122 UBE2BP63146 152 aa10.27□□□□□ -0.76
SYNPO-205ENST00000522122 RPL18AQ02543 176 aaKnown RBP10.27□□□□□ -0.76
SYNPO-205ENST00000522122 TEX49A0A1B0GTD5 131 aa10.26□□□□□ -0.77
SYNPO-205ENST00000522122 C10orf99Q6UWK7 81 aa10.26□□□□□ -0.77
SYNPO-205ENST00000522122 TMEM256-PLSCR3K7ERE1 68 aa10.26□□□□□ -0.77
SYNPO-205ENST00000522122 PRORYQ9H606 182 aa10.26□□□□□ -0.77
SYNPO-205ENST00000522122 MT-ATP8P03928 68 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms