RNA–Protein interactions for RNA: ENST00000521401.1

HOXA3-204, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 598 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-204ENST00000521401 IGLV4-60A0A075B6I1 120 aa14.04□□□□□ -0.16
HOXA3-204ENST00000521401 A0A1B0GUV1 79 aa14.04□□□□□ -0.16
HOXA3-204ENST00000521401 INAFM2P0DMQ5 153 aa14.04□□□□□ -0.16
HOXA3-204ENST00000521401 RPL39LQ96EH5 51 aaKnown RBP14.04□□□□□ -0.16
HOXA3-204ENST00000521401 GFRA4Q9GZZ7 299 aa14.04□□□□□ -0.16
HOXA3-204ENST00000521401 ZNF727A8MUV8 499 aa14.03□□□□□ -0.16
HOXA3-204ENST00000521401 USP17L23D6RBM5 183 aa14.03□□□□□ -0.16
HOXA3-204ENST00000521401 COTL1Q14019 142 aa14.03□□□□□ -0.16
HOXA3-204ENST00000521401 HLA-DQA1P01909 254 aa14.02□□□□□ -0.17
HOXA3-204ENST00000521401 REG3AQ06141 175 aa14.02□□□□□ -0.17
HOXA3-204ENST00000521401 C14orf177Q52M58 125 aa14.02□□□□□ -0.17
HOXA3-204ENST00000521401 SMIM15Q7Z3B0 74 aa14.02□□□□□ -0.17
HOXA3-204ENST00000521401 OSTCQ9NRP0 149 aa14.02□□□□□ -0.17
HOXA3-204ENST00000521401 FAM229AH3BQW9 127 aa14.01□□□□□ -0.17
HOXA3-204ENST00000521401 AMTP48728 403 aa14.01□□□□□ -0.17
HOXA3-204ENST00000521401 TSKUQ8WUA8 353 aa14.01□□□□□ -0.17
HOXA3-204ENST00000521401 MYCBP2O75592 4640 aa14□□□□□ -0.17
HOXA3-204ENST00000521401 HIGD1CA8MV81 97 aa13.99□□□□□ -0.17
HOXA3-204ENST00000521401 C9JQL5 133 aa13.99□□□□□ -0.17
HOXA3-204ENST00000521401 PRSS1P07477 247 aa13.99□□□□□ -0.17
HOXA3-204ENST00000521401 HERC1Q15751 4861 aa13.98□□□□□ -0.17
HOXA3-204ENST00000521401 IGLV10-54A0A075B6I4 117 aa13.98□□□□□ -0.17
HOXA3-204ENST00000521401 GAS8-AS1O95177 125 aa13.98□□□□□ -0.17
HOXA3-204ENST00000521401 TEX261Q6UWH6 196 aa13.98□□□□□ -0.17
HOXA3-204ENST00000521401 SCXQ7RTU7 201 aa13.98□□□□□ -0.17
HOXA3-204ENST00000521401 V9GYV3 84 aa13.98□□□□□ -0.17
HOXA3-204ENST00000521401 FAM231BA6NCW3 169 aa13.97□□□□□ -0.17
HOXA3-204ENST00000521401 UBE2L6O14933 153 aa13.97□□□□□ -0.17
HOXA3-204ENST00000521401 ISOC2Q96AB3 205 aa13.97□□□□□ -0.17
HOXA3-204ENST00000521401 TRAV8-4A0A0B4J246 113 aa13.96□□□□□ -0.17
HOXA3-204ENST00000521401 TRBV6-5A0A0K0K1A5 114 aa13.96□□□□□ -0.17
HOXA3-204ENST00000521401 A0A1B0GUT8 65 aa13.96□□□□□ -0.17
HOXA3-204ENST00000521401 SDHAF1A6NFY7 115 aa13.96□□□□□ -0.17
HOXA3-204ENST00000521401 NCR2O95944 276 aa13.96□□□□□ -0.17
HOXA3-204ENST00000521401 SRSF3P84103 164 aaKnown RBP13.96□□□□□ -0.17
HOXA3-204ENST00000521401 RNF185Q96GF1 192 aa13.96□□□□□ -0.17
HOXA3-204ENST00000521401 RPL23P62829 140 aaKnown RBP13.95□□□□□ -0.18
HOXA3-204ENST00000521401 TMEM241Q24JQ0 296 aa13.95□□□□□ -0.18
HOXA3-204ENST00000521401 BORCS7Q96B45 105 aa13.95□□□□□ -0.18
HOXA3-204ENST00000521401 CHAC1Q9BUX1 264 aa13.95□□□□□ -0.18
HOXA3-204ENST00000521401 TMEM191AQ9H0A3 160 aa13.95□□□□□ -0.18
HOXA3-204ENST00000521401 FAM74A3Q4VXF1 159 aa13.94□□□□□ -0.18
HOXA3-204ENST00000521401 RAB4AP20338 218 aa13.93□□□□□ -0.18
HOXA3-204ENST00000521401 DGAT2L7PQ6IED9 249 aa13.93□□□□□ -0.18
HOXA3-204ENST00000521401 LINC00528Q8N1L1 170 aa13.93□□□□□ -0.18
HOXA3-204ENST00000521401 NUP35Q8NFH5 326 aa13.93□□□□□ -0.18
HOXA3-204ENST00000521401 CIRBP-AS1Q8TBR5 109 aa13.93□□□□□ -0.18
HOXA3-204ENST00000521401 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.92□□□□□ -0.18
HOXA3-204ENST00000521401 IGKV2-29A2NJV5 120 aaPredicted RBP13.92□□□□□ -0.18
HOXA3-204ENST00000521401 APCSP02743 223 aa13.92□□□□□ -0.18
HOXA3-204ENST00000521401 C9orf163Q8N9P6 203 aa13.92□□□□□ -0.18
HOXA3-204ENST00000521401 H7C423 109 aa13.91□□□□□ -0.18
HOXA3-204ENST00000521401 I3L3M4 83 aa13.91□□□□□ -0.18
HOXA3-204ENST00000521401 RPS10P46783 165 aaKnown RBP13.91□□□□□ -0.18
HOXA3-204ENST00000521401 AMN1Q8IY45 258 aa13.91□□□□□ -0.18
HOXA3-204ENST00000521401 CLRN3Q8NCR9 226 aa13.91□□□□□ -0.18
HOXA3-204ENST00000521401 PMCHP20382 165 aa13.9□□□□□ -0.18
HOXA3-204ENST00000521401 NAT8Q9UHE5 227 aa13.9□□□□□ -0.18
HOXA3-204ENST00000521401 TSHBP01222 138 aa13.89□□□□□ -0.19
HOXA3-204ENST00000521401 FGF6P10767 208 aa13.89□□□□□ -0.19
HOXA3-204ENST00000521401 ESDP10768 282 aa13.89□□□□□ -0.19
HOXA3-204ENST00000521401 POLR2KP53803 58 aaKnown RBP13.89□□□□□ -0.19
HOXA3-204ENST00000521401 RIGQ13278 110 aa13.89□□□□□ -0.19
HOXA3-204ENST00000521401 PEA15Q15121 130 aa13.89□□□□□ -0.19
HOXA3-204ENST00000521401 ADIRFQ15847 76 aa13.89□□□□□ -0.19
HOXA3-204ENST00000521401 MRAP2Q96G30 205 aa13.89□□□□□ -0.19
HOXA3-204ENST00000521401 ST20Q9HBF5 79 aa13.89□□□□□ -0.19
HOXA3-204ENST00000521401 SRRM2Q9UQ35 2752 aaKnown RBP13.88□□□□□ -0.19
HOXA3-204ENST00000521401 SMDT1Q9H4I9 107 aa13.88□□□□□ -0.19
HOXA3-204ENST00000521401 SLPIP03973 132 aa13.87□□□□□ -0.19
HOXA3-204ENST00000521401 PLA2G1BP04054 148 aaKnown RBP13.87□□□□□ -0.19
HOXA3-204ENST00000521401 CNBPP62633 177 aaKnown RBP13.87□□□□□ -0.19
HOXA3-204ENST00000521401 AMMECR1LQ6DCA0 310 aa13.87□□□□□ -0.19
HOXA3-204ENST00000521401 RNASEKQ6P5S7 137 aaKnown RBP13.87□□□□□ -0.19
HOXA3-204ENST00000521401 TMEM242Q9NWH2 141 aa13.87□□□□□ -0.19
HOXA3-204ENST00000521401 NAT8BQ9UHF3 227 aa13.87□□□□□ -0.19
HOXA3-204ENST00000521401 IGKV3OR2-268A0A0C4DH90 116 aa13.86□□□□□ -0.19
HOXA3-204ENST00000521401 SMIM27A0A1W2PRY6 76 aa13.86□□□□□ -0.19
HOXA3-204ENST00000521401 GAGE12HA6NDE8 117 aa13.86□□□□□ -0.19
HOXA3-204ENST00000521401 SMKR1H3BMG3 65 aa13.86□□□□□ -0.19
HOXA3-204ENST00000521401 KRTAP10-4P60372 401 aaPredicted RBP13.86□□□□□ -0.19
HOXA3-204ENST00000521401 SDIM1Q6ZPB5 146 aa13.86□□□□□ -0.19
HOXA3-204ENST00000521401 FLG2Q5D862 2391 aaPredicted RBP13.86□□□□□ -0.19
HOXA3-204ENST00000521401 TRBV27A0A0K0K1C4 114 aa13.85□□□□□ -0.19
HOXA3-204ENST00000521401 hDV102S1A0JD36 115 aa13.85□□□□□ -0.19
HOXA3-204ENST00000521401 NRACQ8N912 160 aa13.85□□□□□ -0.19
HOXA3-204ENST00000521401 PANO1I0J062 215 aa13.84□□□□□ -0.19
HOXA3-204ENST00000521401 ZNF25P17030 456 aaPredicted RBP13.84□□□□□ -0.19
HOXA3-204ENST00000521401 C15orf56Q8N910 161 aa13.84□□□□□ -0.19
HOXA3-204ENST00000521401 CHCHD10Q8WYQ3 142 aaPredicted RBP13.84□□□□□ -0.19
HOXA3-204ENST00000521401 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.84□□□□□ -0.19
HOXA3-204ENST00000521401 FAM104BQ5XKR9 115 aa13.82□□□□□ -0.2
HOXA3-204ENST00000521401 OR5A1Q8NGJ0 315 aa13.82□□□□□ -0.2
HOXA3-204ENST00000521401 FAT3Q8TDW7 4589 aa13.8□□□□□ -0.2
HOXA3-204ENST00000521401 VCYO14598 125 aa13.8□□□□□ -0.2
HOXA3-204ENST00000521401 FOXI1Q12951 378 aa13.8□□□□□ -0.2
HOXA3-204ENST00000521401 MRPL51Q4U2R6 128 aaKnown RBP13.8□□□□□ -0.2
HOXA3-204ENST00000521401 MRPL52Q86TS9 123 aaKnown RBP13.8□□□□□ -0.2
HOXA3-204ENST00000521401 AP5S1Q9NUS5 200 aa13.8□□□□□ -0.2
HOXA3-204ENST00000521401 CAMPP49913 170 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 156.2 ms