RNA–Protein interactions for RNA: ENST00000521399.5

SNHG6-205, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2

Gene SNHG6, Length 302 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-205ENST00000521399 RAB5CP51148 216 aa12.9□□□□□ -0.34
SNHG6-205ENST00000521399 CENPWQ5EE01 88 aa12.9□□□□□ -0.34
SNHG6-205ENST00000521399 PGLYRP4Q96LB8 373 aa12.9□□□□□ -0.34
SNHG6-205ENST00000521399 MANBALQ9NQG1 85 aa12.9□□□□□ -0.34
SNHG6-205ENST00000521399 LINC00862A6NCI5 91 aa12.89□□□□□ -0.35
SNHG6-205ENST00000521399 C19orf71A6NCJ1 209 aa12.89□□□□□ -0.35
SNHG6-205ENST00000521399 CHTF8P0CG12 524 aa12.89□□□□□ -0.35
SNHG6-205ENST00000521399 CCL20P78556 96 aa12.89□□□□□ -0.35
SNHG6-205ENST00000521399 SPACA4Q8TDM5 124 aa12.89□□□□□ -0.35
SNHG6-205ENST00000521399 F2Z2F3 143 aa12.88□□□□□ -0.35
SNHG6-205ENST00000521399 EIF5AL1Q6IS14 154 aaKnown RBP12.88□□□□□ -0.35
SNHG6-205ENST00000521399 NIT2Q9NQR4 276 aa12.88□□□□□ -0.35
SNHG6-205ENST00000521399 GNG13Q9P2W3 67 aa12.88□□□□□ -0.35
SNHG6-205ENST00000521399 UBE2L6O14933 153 aa12.87□□□□□ -0.35
SNHG6-205ENST00000521399 DPH3P1Q9H4G8 78 aa12.87□□□□□ -0.35
SNHG6-205ENST00000521399 MED9Q9NWA0 146 aa12.87□□□□□ -0.35
SNHG6-205ENST00000521399 TNXBP22105 4242 aa12.86□□□□□ -0.35
SNHG6-205ENST00000521399 XKRY2A2RUG3 117 aa12.86□□□□□ -0.35
SNHG6-205ENST00000521399 TRGC1P0CF51 173 aa12.86□□□□□ -0.35
SNHG6-205ENST00000521399 WDR73Q6P4I2 378 aa12.86□□□□□ -0.35
SNHG6-205ENST00000521399 SMIM12Q96EX1 92 aa12.86□□□□□ -0.35
SNHG6-205ENST00000521399 TRAV1-1A0A0B4J248 108 aa12.85□□□□□ -0.35
SNHG6-205ENST00000521399 RAB19A4D1S5 217 aa12.85□□□□□ -0.35
SNHG6-205ENST00000521399 NTF3P20783 257 aa12.85□□□□□ -0.35
SNHG6-205ENST00000521399 AMTP48728 403 aa12.85□□□□□ -0.35
SNHG6-205ENST00000521399 GNG4P50150 75 aa12.85□□□□□ -0.35
SNHG6-205ENST00000521399 SULT1A2P50226 295 aa12.85□□□□□ -0.35
SNHG6-205ENST00000521399 RAB14P61106 215 aa12.85□□□□□ -0.35
SNHG6-205ENST00000521399 COTL1Q14019 142 aa12.85□□□□□ -0.35
SNHG6-205ENST00000521399 LYZL1Q6UWQ5 148 aa12.85□□□□□ -0.35
SNHG6-205ENST00000521399 PLAC8Q9NZF1 115 aa12.85□□□□□ -0.35
SNHG6-205ENST00000521399 ATP6V1G1O75348 118 aa12.84□□□□□ -0.35
SNHG6-205ENST00000521399 C15orf56Q8N910 161 aa12.84□□□□□ -0.35
SNHG6-205ENST00000521399 PHOX2AO14813 284 aa12.83□□□□□ -0.36
SNHG6-205ENST00000521399 IFNA1P01562 189 aa12.83□□□□□ -0.36
SNHG6-205ENST00000521399 CFAP161Q6P656 301 aa12.83□□□□□ -0.36
SNHG6-205ENST00000521399 LRP2P98164 4655 aa12.83□□□□□ -0.36
SNHG6-205ENST00000521399 GAGE12HA6NDE8 117 aa12.82□□□□□ -0.36
SNHG6-205ENST00000521399 COX6A2Q02221 97 aa12.82□□□□□ -0.36
SNHG6-205ENST00000521399 SLC7A5P1Q8MH63 180 aa12.82□□□□□ -0.36
SNHG6-205ENST00000521399 C7orf33Q8WU49 177 aa12.82□□□□□ -0.36
SNHG6-205ENST00000521399 RPS10P46783 165 aaKnown RBP12.81□□□□□ -0.36
SNHG6-205ENST00000521399 TRBV20OR9-2A0A075B6H5 130 aa12.8□□□□□ -0.36
SNHG6-205ENST00000521399 IGKV3OR2-268A0A0C4DH90 116 aa12.8□□□□□ -0.36
SNHG6-205ENST00000521399 PDE6DO43924 150 aa12.8□□□□□ -0.36
SNHG6-205ENST00000521399 CTRLP40313 264 aa12.8□□□□□ -0.36
SNHG6-205ENST00000521399 MEF2BQ02080 365 aaPredicted RBP12.8□□□□□ -0.36
SNHG6-205ENST00000521399 BIN3Q9NQY0 253 aa12.8□□□□□ -0.36
SNHG6-205ENST00000521399 NDUFS6O75380 124 aaKnown RBP12.79□□□□□ -0.36
SNHG6-205ENST00000521399 HIGD2BQ4VC39 106 aa12.79□□□□□ -0.36
SNHG6-205ENST00000521399 LYPD6BQ8NI32 183 aa12.79□□□□□ -0.36
SNHG6-205ENST00000521399 CNFNQ9BYD5 112 aa12.79□□□□□ -0.36
SNHG6-205ENST00000521399 TEX46H3BTG2 121 aa12.78□□□□□ -0.36
SNHG6-205ENST00000521399 GATD1Q8NB37 220 aa12.78□□□□□ -0.36
SNHG6-205ENST00000521399 NUDT10Q8NFP7 164 aa12.78□□□□□ -0.36
SNHG6-205ENST00000521399 PRSS3P2Q8NHM4 247 aa12.78□□□□□ -0.36
SNHG6-205ENST00000521399 NUDT11Q96G61 164 aa12.78□□□□□ -0.36
SNHG6-205ENST00000521399 TWIST1Q15672 202 aa12.77□□□□□ -0.37
SNHG6-205ENST00000521399 MAJINQ3KP22 176 aa12.77□□□□□ -0.37
SNHG6-205ENST00000521399 CHCHD10Q8WYQ3 142 aaPredicted RBP12.77□□□□□ -0.37
SNHG6-205ENST00000521399 TRAV26-2A0A0B4J265 109 aa12.76□□□□□ -0.37
SNHG6-205ENST00000521399 IGKV2-24A0A0C4DH68 120 aa12.76□□□□□ -0.37
SNHG6-205ENST00000521399 BLOC1S1P78537 153 aa12.76□□□□□ -0.37
SNHG6-205ENST00000521399 AMMECR1LQ6DCA0 310 aa12.76□□□□□ -0.37
SNHG6-205ENST00000521399 COMMD7Q86VX2 200 aa12.76□□□□□ -0.37
SNHG6-205ENST00000521399 GTSF1Q8WW33 167 aa12.76□□□□□ -0.37
SNHG6-205ENST00000521399 GVQW2A0A096LPI5 108 aaPredicted RBP12.75□□□□□ -0.37
SNHG6-205ENST00000521399 NCR2O95944 276 aa12.75□□□□□ -0.37
SNHG6-205ENST00000521399 PRR3P79522 188 aaKnown RBP12.74□□□□□ -0.37
SNHG6-205ENST00000521399 RNASEKQ6P5S7 137 aaKnown RBP12.74□□□□□ -0.37
SNHG6-205ENST00000521399 STPG4Q8N801 248 aa12.74□□□□□ -0.37
SNHG6-205ENST00000521399 LINC01600Q96MT4 127 aa12.74□□□□□ -0.37
SNHG6-205ENST00000521399 RNF213Q63HN8 5207 aa12.73□□□□□ -0.37
SNHG6-205ENST00000521399 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.73□□□□□ -0.37
SNHG6-205ENST00000521399 IGKV2-29A2NJV5 120 aaPredicted RBP12.73□□□□□ -0.37
SNHG6-205ENST00000521399 H7C423 109 aa12.73□□□□□ -0.37
SNHG6-205ENST00000521399 BCL2P10415 239 aa12.73□□□□□ -0.37
SNHG6-205ENST00000521399 S100A1P23297 94 aa12.73□□□□□ -0.37
SNHG6-205ENST00000521399 RPL39LQ96EH5 51 aaKnown RBP12.73□□□□□ -0.37
SNHG6-205ENST00000521399 RPP21Q9H633 154 aaKnown RBP12.73□□□□□ -0.37
SNHG6-205ENST00000521399 APCSP02743 223 aa12.72□□□□□ -0.37
SNHG6-205ENST00000521399 FGF6P10767 208 aa12.72□□□□□ -0.37
SNHG6-205ENST00000521399 A0A096LNI7 61 aa12.71□□□□□ -0.37
SNHG6-205ENST00000521399 FOXI1Q12951 378 aa12.71□□□□□ -0.37
SNHG6-205ENST00000521399 RNASE7Q9H1E1 156 aaKnown RBP12.71□□□□□ -0.37
SNHG6-205ENST00000521399 SDHAF1A6NFY7 115 aa12.7□□□□□ -0.38
SNHG6-205ENST00000521399 K7EN84 100 aa12.7□□□□□ -0.38
SNHG6-205ENST00000521399 FOXA3P55318 350 aaPredicted RBP12.7□□□□□ -0.38
SNHG6-205ENST00000521399 ZNF25P17030 456 aaPredicted RBP12.69□□□□□ -0.38
SNHG6-205ENST00000521399 UQCC3Q6UW78 93 aa12.69□□□□□ -0.38
SNHG6-205ENST00000521399 SMIM15Q7Z3B0 74 aa12.69□□□□□ -0.38
SNHG6-205ENST00000521399 OR5A1Q8NGJ0 315 aa12.69□□□□□ -0.38
SNHG6-205ENST00000521399 OCC1Q8TAD7 63 aa12.69□□□□□ -0.38
SNHG6-205ENST00000521399 LINC00474Q9P2X8 69 aa12.68□□□□□ -0.38
SNHG6-205ENST00000521399 TAGLN2P37802 199 aaKnown RBP12.67□□□□□ -0.38
SNHG6-205ENST00000521399 XCL1P47992 114 aa12.67□□□□□ -0.38
SNHG6-205ENST00000521399 A0A0J9YXV3 536 aa12.66□□□□□ -0.38
SNHG6-205ENST00000521399 LINC00959A0A1B0GUT2 108 aa12.66□□□□□ -0.38
SNHG6-205ENST00000521399 FAM231BA6NCW3 169 aa12.66□□□□□ -0.38
SNHG6-205ENST00000521399 I3L3M4 83 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms