RNA–Protein interactions for RNA: ENST00000521049.5

TRAM1-204, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 872 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-204ENST00000521049 ODF1Q14990 250 aa10.29□□□□□ -0.76
TRAM1-204ENST00000521049 EIF5AL1Q6IS14 154 aaKnown RBP10.29□□□□□ -0.76
TRAM1-204ENST00000521049 BAGE2Q86Y30 109 aa10.29□□□□□ -0.76
TRAM1-204ENST00000521049 C9orf62Q8N4C0 152 aa10.29□□□□□ -0.76
TRAM1-204ENST00000521049 SFT2D1Q8WV19 159 aa10.29□□□□□ -0.76
TRAM1-204ENST00000521049 MBD3L1Q8WWY6 194 aa10.29□□□□□ -0.76
TRAM1-204ENST00000521049 AP1S3Q96PC3 154 aa10.29□□□□□ -0.76
TRAM1-204ENST00000521049 TMEM243Q9BU79 118 aa10.29□□□□□ -0.76
TRAM1-204ENST00000521049 GFRA4Q9GZZ7 299 aa10.29□□□□□ -0.76
TRAM1-204ENST00000521049 MAJINQ3KP22 176 aa10.28□□□□□ -0.76
TRAM1-204ENST00000521049 SPINK6Q6UWN8 80 aa10.28□□□□□ -0.76
TRAM1-204ENST00000521049 SLC51BQ86UW2 128 aa10.28□□□□□ -0.76
TRAM1-204ENST00000521049 A0A1B0GV50 99 aa10.27□□□□□ -0.77
TRAM1-204ENST00000521049 PAGE4O60829 102 aa10.27□□□□□ -0.77
TRAM1-204ENST00000521049 H2AFB1P0C5Y9 115 aa10.27□□□□□ -0.77
TRAM1-204ENST00000521049 C15orf56Q8N910 161 aa10.27□□□□□ -0.77
TRAM1-204ENST00000521049 PRSS3P2Q8NHM4 247 aa10.27□□□□□ -0.77
TRAM1-204ENST00000521049 REG3GQ6UW15 175 aa10.26□□□□□ -0.77
TRAM1-204ENST00000521049 STPG4Q8N801 248 aa10.26□□□□□ -0.77
TRAM1-204ENST00000521049 PGLYRP4Q96LB8 373 aa10.26□□□□□ -0.77
TRAM1-204ENST00000521049 GAGE12HA6NDE8 117 aa10.25□□□□□ -0.77
TRAM1-204ENST00000521049 SULT1A2P50226 295 aa10.25□□□□□ -0.77
TRAM1-204ENST00000521049 NKX2-5P52952 324 aaPredicted RBP10.25□□□□□ -0.77
TRAM1-204ENST00000521049 SUMO4Q6EEV6 95 aa10.25□□□□□ -0.77
TRAM1-204ENST00000521049 IGKV2-24A0A0C4DH68 120 aa10.24□□□□□ -0.77
TRAM1-204ENST00000521049 MGPP08493 103 aa10.24□□□□□ -0.77
TRAM1-204ENST00000521049 SRSF9Q13242 221 aaKnown RBP eCLIP10.24□□□□□ -0.77
TRAM1-204ENST00000521049 LYPD6BQ8NI32 183 aa10.24□□□□□ -0.77
TRAM1-204ENST00000521049 SCO2A0A1W2PP80 73 aa10.23□□□□□ -0.77
TRAM1-204ENST00000521049 UBE2L6O14933 153 aa10.23□□□□□ -0.77
TRAM1-204ENST00000521049 GAS8-AS1O95177 125 aa10.23□□□□□ -0.77
TRAM1-204ENST00000521049 RASL11AQ6T310 242 aa10.23□□□□□ -0.77
TRAM1-204ENST00000521049 NIT2Q9NQR4 276 aa10.23□□□□□ -0.77
TRAM1-204ENST00000521049 TRAV1-1A0A0B4J248 108 aa10.22□□□□□ -0.77
TRAM1-204ENST00000521049 HIGD2BQ4VC39 106 aa10.22□□□□□ -0.77
TRAM1-204ENST00000521049 LINC00474Q9P2X8 69 aa10.22□□□□□ -0.77
TRAM1-204ENST00000521049 TEX46H3BTG2 121 aa10.21□□□□□ -0.77
TRAM1-204ENST00000521049 IGLC6P0CF74 106 aa10.21□□□□□ -0.77
TRAM1-204ENST00000521049 CACNG7P62955 275 aa10.21□□□□□ -0.77
TRAM1-204ENST00000521049 GVQW2A0A096LPI5 108 aaPredicted RBP10.2□□□□□ -0.78
TRAM1-204ENST00000521049 AMTP48728 403 aa10.2□□□□□ -0.78
TRAM1-204ENST00000521049 RPS20P60866 119 aaKnown RBP10.2□□□□□ -0.78
TRAM1-204ENST00000521049 CCL20P78556 96 aa10.2□□□□□ -0.78
TRAM1-204ENST00000521049 COTL1Q14019 142 aa10.2□□□□□ -0.78
TRAM1-204ENST00000521049 FER1L6-AS1Q8NA97 138 aa10.2□□□□□ -0.78
TRAM1-204ENST00000521049 TPPP3Q9BW30 176 aa10.2□□□□□ -0.78
TRAM1-204ENST00000521049 A0A096LNI7 61 aa10.19□□□□□ -0.78
TRAM1-204ENST00000521049 Q6ZRP5 223 aa10.19□□□□□ -0.78
TRAM1-204ENST00000521049 CHCHD10Q8WYQ3 142 aaPredicted RBP10.19□□□□□ -0.78
TRAM1-204ENST00000521049 MANBALQ9NQG1 85 aa10.19□□□□□ -0.78
TRAM1-204ENST00000521049 GNG13Q9P2W3 67 aa10.19□□□□□ -0.78
TRAM1-204ENST00000521049 PKIGQ9Y2B9 76 aa10.19□□□□□ -0.78
TRAM1-204ENST00000521049 IGKV3OR2-268A0A0C4DH90 116 aa10.18□□□□□ -0.78
TRAM1-204ENST00000521049 F2Z2F3 143 aa10.18□□□□□ -0.78
TRAM1-204ENST00000521049 ALKAL2Q6UX46 152 aa10.18□□□□□ -0.78
TRAM1-204ENST00000521049 TRGC1P0CF51 173 aa10.17□□□□□ -0.78
TRAM1-204ENST00000521049 LORP23490 312 aaPredicted RBP10.17□□□□□ -0.78
TRAM1-204ENST00000521049 RPL35P42766 123 aaKnown RBP10.17□□□□□ -0.78
TRAM1-204ENST00000521049 OR2D3Q8NGH3 330 aa10.17□□□□□ -0.78
TRAM1-204ENST00000521049 C19orf71A6NCJ1 209 aa10.15□□□□□ -0.78
TRAM1-204ENST00000521049 IFNA1P01562 189 aa10.15□□□□□ -0.78
TRAM1-204ENST00000521049 XKRY2A2RUG3 117 aa10.14□□□□□ -0.79
TRAM1-204ENST00000521049 H7C423 109 aa10.14□□□□□ -0.79
TRAM1-204ENST00000521049 NTF3P20783 257 aa10.14□□□□□ -0.79
TRAM1-204ENST00000521049 BLOC1S1P78537 153 aa10.14□□□□□ -0.79
TRAM1-204ENST00000521049 FOXI1Q12951 378 aa10.14□□□□□ -0.79
TRAM1-204ENST00000521049 AMMECR1LQ6DCA0 310 aa10.14□□□□□ -0.79
TRAM1-204ENST00000521049 LYZL1Q6UWQ5 148 aa10.14□□□□□ -0.79
TRAM1-204ENST00000521049 NCR2O95944 276 aa10.13□□□□□ -0.79
TRAM1-204ENST00000521049 BCL2P10415 239 aa10.13□□□□□ -0.79
TRAM1-204ENST00000521049 MEF2BQ02080 365 aaPredicted RBP10.13□□□□□ -0.79
TRAM1-204ENST00000521049 C11orf52Q96A22 123 aa10.13□□□□□ -0.79
TRAM1-204ENST00000521049 IGHV1-58A0A0C4DH39 117 aa10.11□□□□□ -0.79
TRAM1-204ENST00000521049 FAM231BA6NCW3 169 aa10.11□□□□□ -0.79
TRAM1-204ENST00000521049 PDE6DO43924 150 aa10.11□□□□□ -0.79
TRAM1-204ENST00000521049 TAGLN2P37802 199 aaKnown RBP10.11□□□□□ -0.79
TRAM1-204ENST00000521049 CENPWQ5EE01 88 aa10.11□□□□□ -0.79
TRAM1-204ENST00000521049 RNASEKQ6P5S7 137 aaKnown RBP10.11□□□□□ -0.79
TRAM1-204ENST00000521049 GATD1Q8NB37 220 aa10.11□□□□□ -0.79
TRAM1-204ENST00000521049 OR5A1Q8NGJ0 315 aa10.11□□□□□ -0.79
TRAM1-204ENST00000521049 SMIM12Q96EX1 92 aa10.11□□□□□ -0.79
TRAM1-204ENST00000521049 CARD19Q96LW7 228 aa10.11□□□□□ -0.79
TRAM1-204ENST00000521049 LPAP08519 4548 aa10.1□□□□□ -0.79
TRAM1-204ENST00000521049 FGF6P10767 208 aa10.1□□□□□ -0.79
TRAM1-204ENST00000521049 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.09□□□□□ -0.79
TRAM1-204ENST00000521049 IGKV2-29A2NJV5 120 aaPredicted RBP10.09□□□□□ -0.79
TRAM1-204ENST00000521049 ZNF25P17030 456 aaPredicted RBP10.09□□□□□ -0.79
TRAM1-204ENST00000521049 XCL1P47992 114 aa10.09□□□□□ -0.79
TRAM1-204ENST00000521049 LINC00526Q96FQ7 95 aa10.09□□□□□ -0.79
TRAM1-204ENST00000521049 MED9Q9NWA0 146 aa10.09□□□□□ -0.79
TRAM1-204ENST00000521049 LINC00959A0A1B0GUT2 108 aa10.08□□□□□ -0.8
TRAM1-204ENST00000521049 APCSP02743 223 aa10.08□□□□□ -0.8
TRAM1-204ENST00000521049 PTTG1IPP53801 180 aa10.08□□□□□ -0.8
TRAM1-204ENST00000521049 SYCNQ0VAF6 134 aa10.08□□□□□ -0.8
TRAM1-204ENST00000521049 TWIST1Q15672 202 aa10.08□□□□□ -0.8
TRAM1-204ENST00000521049 CNFNQ9BYD5 112 aa10.08□□□□□ -0.8
TRAM1-204ENST00000521049 BIN3Q9NQY0 253 aa10.08□□□□□ -0.8
TRAM1-204ENST00000521049 TRAV26-2A0A0B4J265 109 aa10.07□□□□□ -0.8
TRAM1-204ENST00000521049 RAB19A4D1S5 217 aa10.07□□□□□ -0.8
TRAM1-204ENST00000521049 ZNF561-AS1K7EIQ3 104 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms