RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 BTF3P20290 206 aaKnown RBP11.85□□□□□ -0.51
TRAM1-203ENST00000520700 PKIAP61925 76 aa11.85□□□□□ -0.51
TRAM1-203ENST00000520700 RYR3Q15413 4870 aa11.85□□□□□ -0.51
TRAM1-203ENST00000520700 TRAV9-2A0A087WT02 112 aa11.84□□□□□ -0.51
TRAM1-203ENST00000520700 TCAPO15273 167 aa11.84□□□□□ -0.51
TRAM1-203ENST00000520700 TTC32Q5I0X7 151 aa11.84□□□□□ -0.51
TRAM1-203ENST00000520700 NIT1Q86X76 327 aa11.84□□□□□ -0.51
TRAM1-203ENST00000520700 MRPL18Q9H0U6 180 aaKnown RBP11.84□□□□□ -0.51
TRAM1-203ENST00000520700 KMT2AQ03164 3969 aa11.84□□□□□ -0.51
TRAM1-203ENST00000520700 TSHBP01222 138 aa11.83□□□□□ -0.52
TRAM1-203ENST00000520700 SMIM2Q9BVW6 85 aa11.83□□□□□ -0.52
TRAM1-203ENST00000520700 TRAPPC1Q9Y5R8 145 aa11.83□□□□□ -0.52
TRAM1-203ENST00000520700 H7C423 109 aa11.82□□□□□ -0.52
TRAM1-203ENST00000520700 FABP9Q0Z7S8 132 aa11.82□□□□□ -0.52
TRAM1-203ENST00000520700 C10orf126Q8N4M7 172 aa11.82□□□□□ -0.52
TRAM1-203ENST00000520700 KIR2DL4Q99706 377 aa11.82□□□□□ -0.52
TRAM1-203ENST00000520700 ALKBH7Q9BT30 221 aaPredicted RBP11.82□□□□□ -0.52
TRAM1-203ENST00000520700 TMEM243Q9BU79 118 aa11.82□□□□□ -0.52
TRAM1-203ENST00000520700 IGLV2-18A0A075B6J9 118 aa11.81□□□□□ -0.52
TRAM1-203ENST00000520700 COLCA2A8K830 154 aa11.81□□□□□ -0.52
TRAM1-203ENST00000520700 ATP6V1G1O75348 118 aa11.81□□□□□ -0.52
TRAM1-203ENST00000520700 ESDP10768 282 aa11.81□□□□□ -0.52
TRAM1-203ENST00000520700 AMTP48728 403 aa11.81□□□□□ -0.52
TRAM1-203ENST00000520700 KIAA1644Q3SXP7 199 aa11.81□□□□□ -0.52
TRAM1-203ENST00000520700 MAP1LC3AQ9H492 121 aa11.81□□□□□ -0.52
TRAM1-203ENST00000520700 CHCHD5Q9BSY4 110 aa11.8□□□□□ -0.52
TRAM1-203ENST00000520700 A0A1B0GUV1 79 aa11.79□□□□□ -0.52
TRAM1-203ENST00000520700 K7EMI3 77 aa11.79□□□□□ -0.52
TRAM1-203ENST00000520700 A0A087WX48 190 aa11.78□□□□□ -0.52
TRAM1-203ENST00000520700 IBA57-AS1B1ANH7 110 aa11.78□□□□□ -0.52
TRAM1-203ENST00000520700 Q8N8P6 123 aa11.78□□□□□ -0.52
TRAM1-203ENST00000520700 KRTAP1-5Q9BYS1 174 aa11.78□□□□□ -0.52
TRAM1-203ENST00000520700 NXT2Q9NPJ8 142 aaKnown RBP11.78□□□□□ -0.52
TRAM1-203ENST00000520700 TMEM262E9PQX1 116 aa11.77□□□□□ -0.53
TRAM1-203ENST00000520700 FCER1GP30273 86 aa11.77□□□□□ -0.53
TRAM1-203ENST00000520700 M0R2N4 97 aa11.76□□□□□ -0.53
TRAM1-203ENST00000520700 IGHV3-30P01768 117 aa11.76□□□□□ -0.53
TRAM1-203ENST00000520700 IGHV3-33P01772 117 aa11.76□□□□□ -0.53
TRAM1-203ENST00000520700 IGHV3-30-3P0DP02 117 aa11.76□□□□□ -0.53
TRAM1-203ENST00000520700 IGHV3-30-5P0DP03 117 aa11.76□□□□□ -0.53
TRAM1-203ENST00000520700 LAGE3Q14657 143 aa11.76□□□□□ -0.53
TRAM1-203ENST00000520700 DEFB104AQ8WTQ1 72 aa11.76□□□□□ -0.53
TRAM1-203ENST00000520700 DNAH2Q9P225 4427 aa11.76□□□□□ -0.53
TRAM1-203ENST00000520700 UBE2L6O14933 153 aa11.75□□□□□ -0.53
TRAM1-203ENST00000520700 SCO1O75880 301 aa11.75□□□□□ -0.53
TRAM1-203ENST00000520700 RAB5AP20339 215 aa11.75□□□□□ -0.53
TRAM1-203ENST00000520700 RBX1P62877 108 aa11.75□□□□□ -0.53
TRAM1-203ENST00000520700 GAGE6Q13070 117 aa11.75□□□□□ -0.53
TRAM1-203ENST00000520700 MPV17L2Q567V2 206 aa11.75□□□□□ -0.53
TRAM1-203ENST00000520700 MRPL52Q86TS9 123 aaKnown RBP11.75□□□□□ -0.53
TRAM1-203ENST00000520700 DNAH10Q8IVF4 4471 aa11.74□□□□□ -0.53
TRAM1-203ENST00000520700 LOC389332A0A1B0GUA5 103 aa11.74□□□□□ -0.53
TRAM1-203ENST00000520700 LINC01546A6NGU7 62 aa11.74□□□□□ -0.53
TRAM1-203ENST00000520700 ZNF25P17030 456 aaPredicted RBP11.74□□□□□ -0.53
TRAM1-203ENST00000520700 Q8N3U1 123 aa11.74□□□□□ -0.53
TRAM1-203ENST00000520700 C20orf203Q8NBC4 194 aa11.74□□□□□ -0.53
TRAM1-203ENST00000520700 IFI27P40305 119 aaPredicted RBP11.73□□□□□ -0.53
TRAM1-203ENST00000520700 SMAGPQ0VAQ4 97 aa11.73□□□□□ -0.53
TRAM1-203ENST00000520700 C1orf134Q5TEV5 83 aa11.73□□□□□ -0.53
TRAM1-203ENST00000520700 C6orf223Q8N319 242 aa11.73□□□□□ -0.53
TRAM1-203ENST00000520700 TMEM18Q96B42 140 aa11.73□□□□□ -0.53
TRAM1-203ENST00000520700 TIMM21Q9BVV7 248 aa11.73□□□□□ -0.53
TRAM1-203ENST00000520700 CSDC2Q9Y534 153 aaKnown RBP11.73□□□□□ -0.53
TRAM1-203ENST00000520700 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.72□□□□□ -0.53
TRAM1-203ENST00000520700 IGKV2-29A2NJV5 120 aaPredicted RBP11.72□□□□□ -0.53
TRAM1-203ENST00000520700 FGF6P10767 208 aa11.72□□□□□ -0.53
TRAM1-203ENST00000520700 ORMDL2Q53FV1 153 aa11.72□□□□□ -0.53
TRAM1-203ENST00000520700 NFE4Q86UQ8 179 aa11.72□□□□□ -0.53
TRAM1-203ENST00000520700 PRSS3P2Q8NHM4 247 aa11.72□□□□□ -0.53
TRAM1-203ENST00000520700 PRR34Q9NV39 138 aa11.72□□□□□ -0.53
TRAM1-203ENST00000520700 DNAH17Q9UFH2 4485 aa11.72□□□□□ -0.53
TRAM1-203ENST00000520700 TRAV8-3A0A0A6YYJ7 113 aa11.71□□□□□ -0.53
TRAM1-203ENST00000520700 Q8N976 141 aa11.71□□□□□ -0.53
TRAM1-203ENST00000520700 C18orf32Q8TCD1 76 aa11.71□□□□□ -0.53
TRAM1-203ENST00000520700 KLK12Q9UKR0 248 aa11.71□□□□□ -0.53
TRAM1-203ENST00000520700 IGLV4-60A0A075B6I1 120 aa11.7□□□□□ -0.54
TRAM1-203ENST00000520700 TRGC2P03986 189 aa11.7□□□□□ -0.54
TRAM1-203ENST00000520700 G0S2P27469 103 aa11.7□□□□□ -0.54
TRAM1-203ENST00000520700 Q0VG73 95 aa11.7□□□□□ -0.54
TRAM1-203ENST00000520700 AMMECR1LQ6DCA0 310 aa11.7□□□□□ -0.54
TRAM1-203ENST00000520700 ANGP03950 147 aaKnown RBP11.69□□□□□ -0.54
TRAM1-203ENST00000520700 UBE2D4Q9Y2X8 147 aa11.69□□□□□ -0.54
TRAM1-203ENST00000520700 ENHOQ6UWT2 76 aa11.68□□□□□ -0.54
TRAM1-203ENST00000520700 Q6ZRN7 208 aaPredicted RBP11.68□□□□□ -0.54
TRAM1-203ENST00000520700 TMEM101Q96IK0 257 aa11.68□□□□□ -0.54
TRAM1-203ENST00000520700 PYGO1Q9Y3Y4 419 aa11.68□□□□□ -0.54
TRAM1-203ENST00000520700 LINC01549A6NIU2 74 aa11.67□□□□□ -0.54
TRAM1-203ENST00000520700 RTL8CO15255 209 aa11.67□□□□□ -0.54
TRAM1-203ENST00000520700 RAB5BP61020 215 aa11.67□□□□□ -0.54
TRAM1-203ENST00000520700 RNASEKQ6P5S7 137 aaKnown RBP11.67□□□□□ -0.54
TRAM1-203ENST00000520700 LINC00269Q8N2A0 174 aa11.67□□□□□ -0.54
TRAM1-203ENST00000520700 OR5A1Q8NGJ0 315 aa11.67□□□□□ -0.54
TRAM1-203ENST00000520700 CDC42SE2Q9NRR3 84 aa11.67□□□□□ -0.54
TRAM1-203ENST00000520700 SPANXA1Q9NS26 97 aa11.67□□□□□ -0.54
TRAM1-203ENST00000520700 NPSP0C0P6 89 aa11.66□□□□□ -0.54
TRAM1-203ENST00000520700 LINC00614P0C842 121 aa11.66□□□□□ -0.54
TRAM1-203ENST00000520700 MIAQ16674 131 aa11.66□□□□□ -0.54
TRAM1-203ENST00000520700 LINC00336Q6ZUF6 198 aa11.66□□□□□ -0.54
TRAM1-203ENST00000520700 FA2HQ7L5A8 372 aa11.66□□□□□ -0.54
TRAM1-203ENST00000520700 UBE2WQ96B02 151 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 157.5 ms