RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 ENHOQ6UWT2 76 aa9.39□□□□□ -0.91
VEGFA-221ENST00000520265 NAT8BQ9UHF3 227 aa9.39□□□□□ -0.91
VEGFA-221ENST00000520265 IGLV10-54A0A075B6I4 117 aa9.38□□□□□ -0.91
VEGFA-221ENST00000520265 IGKV3OR2-268A0A0C4DH90 116 aa9.38□□□□□ -0.91
VEGFA-221ENST00000520265 PMCHP20382 165 aa9.38□□□□□ -0.91
VEGFA-221ENST00000520265 HAMPP81172 84 aa9.38□□□□□ -0.91
VEGFA-221ENST00000520265 MIAQ16674 131 aa9.38□□□□□ -0.91
VEGFA-221ENST00000520265 NUP35Q8NFH5 326 aa9.38□□□□□ -0.91
VEGFA-221ENST00000520265 FRZBQ92765 325 aa9.38□□□□□ -0.91
VEGFA-221ENST00000520265 SMDT1Q9H4I9 107 aa9.38□□□□□ -0.91
VEGFA-221ENST00000520265 FAM231BA6NCW3 169 aa9.37□□□□□ -0.91
VEGFA-221ENST00000520265 SDHAF1A6NFY7 115 aa9.37□□□□□ -0.91
VEGFA-221ENST00000520265 CAMPP49913 170 aa9.37□□□□□ -0.91
VEGFA-221ENST00000520265 REG3AQ06141 175 aa9.37□□□□□ -0.91
VEGFA-221ENST00000520265 RNASEKQ6P5S7 137 aaKnown RBP9.37□□□□□ -0.91
VEGFA-221ENST00000520265 AMN1Q8IY45 258 aa9.37□□□□□ -0.91
VEGFA-221ENST00000520265 TMEM191AQ9H0A3 160 aa9.37□□□□□ -0.91
VEGFA-221ENST00000520265 ST20Q9HBF5 79 aa9.37□□□□□ -0.91
VEGFA-221ENST00000520265 SMKR1H3BMG3 65 aa9.36□□□□□ -0.91
VEGFA-221ENST00000520265 NCR2O95944 276 aa9.36□□□□□ -0.91
VEGFA-221ENST00000520265 IGLV4-60A0A075B6I1 120 aa9.35□□□□□ -0.91
VEGFA-221ENST00000520265 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.35□□□□□ -0.91
VEGFA-221ENST00000520265 IGKV2-29A2NJV5 120 aaPredicted RBP9.35□□□□□ -0.91
VEGFA-221ENST00000520265 C14orf177Q52M58 125 aa9.35□□□□□ -0.91
VEGFA-221ENST00000520265 MRAP2Q96G30 205 aa9.35□□□□□ -0.91
VEGFA-221ENST00000520265 USP17L23D6RBM5 183 aa9.34□□□□□ -0.91
VEGFA-221ENST00000520265 I3L3M4 83 aa9.34□□□□□ -0.91
VEGFA-221ENST00000520265 GAS8-AS1O95177 125 aa9.34□□□□□ -0.91
VEGFA-221ENST00000520265 RAB4AP20338 218 aa9.34□□□□□ -0.91
VEGFA-221ENST00000520265 LINC01620Q4KN68 170 aa9.34□□□□□ -0.91
VEGFA-221ENST00000520265 MRPL54Q6P161 138 aaKnown RBP9.34□□□□□ -0.91
VEGFA-221ENST00000520265 C20orf203Q8NBC4 194 aa9.34□□□□□ -0.91
VEGFA-221ENST00000520265 TMEM242Q9NWH2 141 aa9.34□□□□□ -0.91
VEGFA-221ENST00000520265 RYR1P21817 5038 aa9.33□□□□□ -0.92
VEGFA-221ENST00000520265 RPS10P46783 165 aaKnown RBP9.33□□□□□ -0.92
VEGFA-221ENST00000520265 Q8N1X5 172 aa9.33□□□□□ -0.92
VEGFA-221ENST00000520265 RNF185Q96GF1 192 aa9.33□□□□□ -0.92
VEGFA-221ENST00000520265 LRP1BQ9NZR2 4599 aa9.33□□□□□ -0.92
VEGFA-221ENST00000520265 SMIM27A0A1W2PRY6 76 aa9.32□□□□□ -0.92
VEGFA-221ENST00000520265 FCER1GP30273 86 aa9.32□□□□□ -0.92
VEGFA-221ENST00000520265 BTF3L4Q96K17 158 aa9.32□□□□□ -0.92
VEGFA-221ENST00000520265 TMEM70Q9BUB7 260 aa9.32□□□□□ -0.92
VEGFA-221ENST00000520265 KRTAP4-5Q9BYR2 181 aa9.32□□□□□ -0.92
VEGFA-221ENST00000520265 PRR34Q9NV39 138 aa9.32□□□□□ -0.92
VEGFA-221ENST00000520265 A0A1B0GUV1 79 aa9.31□□□□□ -0.92
VEGFA-221ENST00000520265 SMR3BP02814 79 aaPredicted RBP9.31□□□□□ -0.92
VEGFA-221ENST00000520265 S100A8P05109 93 aa9.31□□□□□ -0.92
VEGFA-221ENST00000520265 TMEM101Q96IK0 257 aa9.31□□□□□ -0.92
VEGFA-221ENST00000520265 TRBV6-5A0A0K0K1A5 114 aa9.3□□□□□ -0.92
VEGFA-221ENST00000520265 EPM2AB3EWF7 344 aa9.3□□□□□ -0.92
VEGFA-221ENST00000520265 F8W036 122 aa9.3□□□□□ -0.92
VEGFA-221ENST00000520265 FGF6P10767 208 aa9.3□□□□□ -0.92
VEGFA-221ENST00000520265 XGP55808 180 aa9.3□□□□□ -0.92
VEGFA-221ENST00000520265 HBBP68871 147 aa9.3□□□□□ -0.92
VEGFA-221ENST00000520265 DNAH5Q8TE73 4624 aa9.29□□□□□ -0.92
VEGFA-221ENST00000520265 TRAV8-4A0A0B4J246 113 aa9.29□□□□□ -0.92
VEGFA-221ENST00000520265 A0A1B0GW15 77 aa9.29□□□□□ -0.92
VEGFA-221ENST00000520265 PPP1R2P9O14990 202 aa9.29□□□□□ -0.92
VEGFA-221ENST00000520265 PPP1R17O96001 155 aa9.29□□□□□ -0.92
VEGFA-221ENST00000520265 TSHBP01222 138 aa9.29□□□□□ -0.92
VEGFA-221ENST00000520265 CKS2P33552 79 aa9.29□□□□□ -0.92
VEGFA-221ENST00000520265 MRPL51Q4U2R6 128 aaKnown RBP9.29□□□□□ -0.92
VEGFA-221ENST00000520265 FAM104BQ5XKR9 115 aa9.29□□□□□ -0.92
VEGFA-221ENST00000520265 OR5A1Q8NGJ0 315 aa9.29□□□□□ -0.92
VEGFA-221ENST00000520265 HSPG2P98160 4391 aa9.28□□□□□ -0.92
VEGFA-221ENST00000520265 hDV102S1A0JD36 115 aa9.28□□□□□ -0.92
VEGFA-221ENST00000520265 C7orf77A4D0Y5 90 aa9.28□□□□□ -0.92
VEGFA-221ENST00000520265 SUMO2P61956 95 aaKnown RBP9.28□□□□□ -0.92
VEGFA-221ENST00000520265 CLLU1Q5K131 121 aa9.28□□□□□ -0.92
VEGFA-221ENST00000520265 KIR2DL4Q99706 377 aa9.28□□□□□ -0.92
VEGFA-221ENST00000520265 KRTAP17-1Q9BYP8 105 aa9.28□□□□□ -0.92
VEGFA-221ENST00000520265 FAM30AQ9NZY2 134 aa9.28□□□□□ -0.92
VEGFA-221ENST00000520265 GAGE12HA6NDE8 117 aa9.27□□□□□ -0.93
VEGFA-221ENST00000520265 H7C423 109 aa9.27□□□□□ -0.93
VEGFA-221ENST00000520265 VCYO14598 125 aa9.27□□□□□ -0.93
VEGFA-221ENST00000520265 MT-ND4LP03901 98 aa9.27□□□□□ -0.93
VEGFA-221ENST00000520265 PNRC1Q12796 327 aaPredicted RBP9.27□□□□□ -0.93
VEGFA-221ENST00000520265 Q5VSD8 79 aa9.27□□□□□ -0.93
VEGFA-221ENST00000520265 DGAT2L7PQ6IED9 249 aa9.27□□□□□ -0.93
VEGFA-221ENST00000520265 PCLOQ9Y6V0 5065 aa9.27□□□□□ -0.93
VEGFA-221ENST00000520265 D6R8Y8 96 aa9.26□□□□□ -0.93
VEGFA-221ENST00000520265 PRSS1P07477 247 aa9.26□□□□□ -0.93
VEGFA-221ENST00000520265 ZNF25P17030 456 aaPredicted RBP9.26□□□□□ -0.93
VEGFA-221ENST00000520265 NRACQ8N912 160 aa9.26□□□□□ -0.93
VEGFA-221ENST00000520265 AP5S1Q9NUS5 200 aa9.26□□□□□ -0.93
VEGFA-221ENST00000520265 TRBV27A0A0K0K1C4 114 aa9.25□□□□□ -0.93
VEGFA-221ENST00000520265 FAM229AH3BQW9 127 aa9.25□□□□□ -0.93
VEGFA-221ENST00000520265 POLR2KP53803 58 aaKnown RBP9.25□□□□□ -0.93
VEGFA-221ENST00000520265 CHCHD10Q8WYQ3 142 aaPredicted RBP9.25□□□□□ -0.93
VEGFA-221ENST00000520265 APOBP04114 4563 aaKnown RBP9.24□□□□□ -0.93
VEGFA-221ENST00000520265 LINC00862A6NCI5 91 aa9.24□□□□□ -0.93
VEGFA-221ENST00000520265 XCL1P47992 114 aa9.24□□□□□ -0.93
VEGFA-221ENST00000520265 SMAGPQ0VAQ4 97 aa9.24□□□□□ -0.93
VEGFA-221ENST00000520265 KRTAP26-1Q6PEX3 210 aa9.24□□□□□ -0.93
VEGFA-221ENST00000520265 ANAPC16Q96DE5 110 aa9.24□□□□□ -0.93
VEGFA-221ENST00000520265 A0A1B0GXF2 115 aa9.23□□□□□ -0.93
VEGFA-221ENST00000520265 TNFRSF6BO95407 300 aa9.23□□□□□ -0.93
VEGFA-221ENST00000520265 ESDP10768 282 aa9.23□□□□□ -0.93
VEGFA-221ENST00000520265 HIGD2BQ4VC39 106 aa9.23□□□□□ -0.93
VEGFA-221ENST00000520265 CFAP161Q6P656 301 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms