RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 HHLA3Q9XRX5 114 aa4.1□□□□□ -1.75
CTNNA1-220ENST00000520260 TRGV2A0A075B6R0 118 aa4.09□□□□□ -1.75
CTNNA1-220ENST00000520260 IGHV1OR15-1A0A075B7D0 117 aa4.09□□□□□ -1.75
CTNNA1-220ENST00000520260 IGKV2-40A0A087WW87 121 aaPredicted RBP4.09□□□□□ -1.75
CTNNA1-220ENST00000520260 TRAV8-1A0A0A6YYK1 113 aa4.09□□□□□ -1.75
CTNNA1-220ENST00000520260 TRAV12-3A0A0B4J271 114 aa4.09□□□□□ -1.75
CTNNA1-220ENST00000520260 PRSS47A8MTI9 375 aa4.09□□□□□ -1.75
CTNNA1-220ENST00000520260 FABP5P3A8MUU1 101 aa4.09□□□□□ -1.75
CTNNA1-220ENST00000520260 KLLNB2CW77 178 aa4.09□□□□□ -1.75
CTNNA1-220ENST00000520260 M0R3E3 92 aa4.09□□□□□ -1.75
CTNNA1-220ENST00000520260 DPM2O94777 84 aa4.09□□□□□ -1.75
CTNNA1-220ENST00000520260 IGKV2D-40P01614 121 aaPredicted RBP4.09□□□□□ -1.75
CTNNA1-220ENST00000520260 IGKCP01834 107 aa4.09□□□□□ -1.75
CTNNA1-220ENST00000520260 ATP5G1P05496 136 aa4.09□□□□□ -1.75
CTNNA1-220ENST00000520260 NMUP48645 174 aa4.09□□□□□ -1.75
CTNNA1-220ENST00000520260 CRIP1P50238 77 aa4.09□□□□□ -1.75
CTNNA1-220ENST00000520260 EMP1P54849 157 aa4.09□□□□□ -1.75
CTNNA1-220ENST00000520260 FXYD7P58549 80 aa4.09□□□□□ -1.75
CTNNA1-220ENST00000520260 CKS1BP61024 79 aa4.09□□□□□ -1.75
CTNNA1-220ENST00000520260 ANXA2RQ3ZCQ2 193 aa4.09□□□□□ -1.75
CTNNA1-220ENST00000520260 IGFL4Q6B9Z1 124 aa4.09□□□□□ -1.75
CTNNA1-220ENST00000520260 LYZL1Q6UWQ5 148 aa4.09□□□□□ -1.75
CTNNA1-220ENST00000520260 AMTNQ6UX39 209 aa4.09□□□□□ -1.75
CTNNA1-220ENST00000520260 C15orf53Q8NAA6 179 aa4.09□□□□□ -1.75
CTNNA1-220ENST00000520260 ZNF479Q96JC4 524 aa4.09□□□□□ -1.75
CTNNA1-220ENST00000520260 C17orf77Q96MU5 243 aa4.09□□□□□ -1.75
CTNNA1-220ENST00000520260 C18orf15Q96N68 181 aa4.09□□□□□ -1.75
CTNNA1-220ENST00000520260 CNFNQ9BYD5 112 aa4.09□□□□□ -1.75
CTNNA1-220ENST00000520260 KRTAP9-3Q9BYQ3 159 aa4.09□□□□□ -1.75
CTNNA1-220ENST00000520260 MAP1LC3AQ9H492 121 aa4.09□□□□□ -1.75
CTNNA1-220ENST00000520260 NXT2Q9NPJ8 142 aaKnown RBP4.09□□□□□ -1.75
CTNNA1-220ENST00000520260 DKK2Q9UBU2 259 aa4.09□□□□□ -1.75
CTNNA1-220ENST00000520260 TRBV25-1A0A075B6N4 114 aa4.08□□□□□ -1.76
CTNNA1-220ENST00000520260 TRAV12-2A0A075B6T6 113 aa4.08□□□□□ -1.76
CTNNA1-220ENST00000520260 IGKV2D-26A0A0A0MRZ7 120 aa4.08□□□□□ -1.76
CTNNA1-220ENST00000520260 LOC389332A0A1B0GUA5 103 aa4.08□□□□□ -1.76
CTNNA1-220ENST00000520260 J3KRW8 73 aa4.08□□□□□ -1.76
CTNNA1-220ENST00000520260 NPYP01303 97 aa4.08□□□□□ -1.76
CTNNA1-220ENST00000520260 IGLC6P0CF74 106 aa4.08□□□□□ -1.76
CTNNA1-220ENST00000520260 CKS2P33552 79 aa4.08□□□□□ -1.76
CTNNA1-220ENST00000520260 ASIPP42127 132 aa4.08□□□□□ -1.76
CTNNA1-220ENST00000520260 DAZ2Q13117 558 aaKnown RBP4.08□□□□□ -1.76
CTNNA1-220ENST00000520260 WFDC2Q14508 124 aa4.08□□□□□ -1.76
CTNNA1-220ENST00000520260 TWIST1Q15672 202 aa4.08□□□□□ -1.76
CTNNA1-220ENST00000520260 C12orf74Q32Q52 190 aa4.08□□□□□ -1.76
CTNNA1-220ENST00000520260 GAGE13Q4V321 117 aa4.08□□□□□ -1.76
CTNNA1-220ENST00000520260 SH2D6Q7Z4S9 175 aa4.08□□□□□ -1.76
CTNNA1-220ENST00000520260 AMN1Q8IY45 258 aa4.08□□□□□ -1.76
CTNNA1-220ENST00000520260 Q8NAQ8 132 aa4.08□□□□□ -1.76
CTNNA1-220ENST00000520260 CSNK1G2-AS1Q8NCQ2 148 aa4.08□□□□□ -1.76
CTNNA1-220ENST00000520260 RNF185Q96GF1 192 aa4.08□□□□□ -1.76
CTNNA1-220ENST00000520260 AGPAT4-IT1Q9H0P7 198 aa4.08□□□□□ -1.76
CTNNA1-220ENST00000520260 VCX2Q9H322 139 aa4.08□□□□□ -1.76
CTNNA1-220ENST00000520260 EDA2RQ9HAV5 297 aa4.08□□□□□ -1.76
CTNNA1-220ENST00000520260 RETNQ9HD89 108 aa4.08□□□□□ -1.76
CTNNA1-220ENST00000520260 MRPL16Q9NX20 251 aaKnown RBP4.08□□□□□ -1.76
CTNNA1-220ENST00000520260 TRBV7-3A0A075B6L6 115 aa4.07□□□□□ -1.76
CTNNA1-220ENST00000520260 DEFB131BA0A096LNP1 70 aa4.07□□□□□ -1.76
CTNNA1-220ENST00000520260 H3BMG7 143 aa4.07□□□□□ -1.76
CTNNA1-220ENST00000520260 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.07□□□□□ -1.76
CTNNA1-220ENST00000520260 K7ERJ3 54 aa4.07□□□□□ -1.76
CTNNA1-220ENST00000520260 SH2D1AO60880 128 aa4.07□□□□□ -1.76
CTNNA1-220ENST00000520260 HLA-DMBP28068 263 aa4.07□□□□□ -1.76
CTNNA1-220ENST00000520260 ERCC8Q13216 396 aa4.07□□□□□ -1.76
CTNNA1-220ENST00000520260 FAM222AQ5U5X8 452 aa4.07□□□□□ -1.76
CTNNA1-220ENST00000520260 CEMP1Q6PRD7 247 aaPredicted RBP4.07□□□□□ -1.76
CTNNA1-220ENST00000520260 Q8N8P6 123 aa4.07□□□□□ -1.76
CTNNA1-220ENST00000520260 Q8TAT8 98 aa4.07□□□□□ -1.76
CTNNA1-220ENST00000520260 NHP2Q9NX24 153 aaKnown RBP4.07□□□□□ -1.76
CTNNA1-220ENST00000520260 CYSLTR1Q9Y271 337 aa4.07□□□□□ -1.76
CTNNA1-220ENST00000520260 IGLV2-18A0A075B6J9 118 aa4.06□□□□□ -1.76
CTNNA1-220ENST00000520260 TRAV26-1A0A087WT03 109 aa4.06□□□□□ -1.76
CTNNA1-220ENST00000520260 TRAV12-1A0A0B4J245 112 aa4.06□□□□□ -1.76
CTNNA1-220ENST00000520260 PRAC2D3DTV9 90 aa4.06□□□□□ -1.76
CTNNA1-220ENST00000520260 RHODO00212 210 aa4.06□□□□□ -1.76
CTNNA1-220ENST00000520260 TSPAN13O95857 204 aa4.06□□□□□ -1.76
CTNNA1-220ENST00000520260 ORM1P02763 201 aa4.06□□□□□ -1.76
CTNNA1-220ENST00000520260 P0DMU3 169 aa4.06□□□□□ -1.76
CTNNA1-220ENST00000520260 FAM231AP0DMU4 169 aa4.06□□□□□ -1.76
CTNNA1-220ENST00000520260 FAM231CP0DMU5 169 aa4.06□□□□□ -1.76
CTNNA1-220ENST00000520260 DEFB130BP0DP73 79 aa4.06□□□□□ -1.76
CTNNA1-220ENST00000520260 DEFB130AP0DP74 79 aa4.06□□□□□ -1.76
CTNNA1-220ENST00000520260 CRYBA4P53673 196 aa4.06□□□□□ -1.76
CTNNA1-220ENST00000520260 PIK3CD-AS1Q5SR53 167 aa4.06□□□□□ -1.76
CTNNA1-220ENST00000520260 ZC2HC1BQ5TFG8 222 aa4.06□□□□□ -1.76
CTNNA1-220ENST00000520260 C1orf158Q8N1D5 194 aa4.06□□□□□ -1.76
CTNNA1-220ENST00000520260 FAM19A4Q96LR4 140 aa4.06□□□□□ -1.76
CTNNA1-220ENST00000520260 C8orf49Q96NF6 230 aa4.06□□□□□ -1.76
CTNNA1-220ENST00000520260 GEMIN7Q9H840 131 aaKnown RBP4.06□□□□□ -1.76
CTNNA1-220ENST00000520260 X6R8D5 127 aa4.06□□□□□ -1.76
CTNNA1-220ENST00000520260 A0A087WX48 190 aa4.05□□□□□ -1.76
CTNNA1-220ENST00000520260 TRGV1A0A0A0MS02 117 aa4.05□□□□□ -1.76
CTNNA1-220ENST00000520260 TRGV4A0A0C4DH28 118 aa4.05□□□□□ -1.76
CTNNA1-220ENST00000520260 A8MWV9 139 aa4.05□□□□□ -1.76
CTNNA1-220ENST00000520260 SMKR1H3BMG3 65 aa4.05□□□□□ -1.76
CTNNA1-220ENST00000520260 H3BNG1 76 aa4.05□□□□□ -1.76
CTNNA1-220ENST00000520260 M0QXV9 152 aa4.05□□□□□ -1.76
CTNNA1-220ENST00000520260 M0R2P5 195 aa4.05□□□□□ -1.76
CTNNA1-220ENST00000520260 TNFRSF6BO95407 300 aa4.05□□□□□ -1.76
CTNNA1-220ENST00000520260 PRSS1P07477 247 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms