RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 DYNC2H1Q8NCM8 4307 aaKnown RBP12.19□□□□□ -0.46
SDC2-205ENST00000520233 PRSS3P2Q8NHM4 247 aa12.19□□□□□ -0.46
SDC2-205ENST00000520233 K7EMI3 77 aa12.18□□□□□ -0.46
SDC2-205ENST00000520233 LINC00476Q8WZB0 136 aa12.18□□□□□ -0.46
SDC2-205ENST00000520233 TMEM243Q9BU79 118 aa12.18□□□□□ -0.46
SDC2-205ENST00000520233 CHCHD7Q9BUK0 85 aa12.18□□□□□ -0.46
SDC2-205ENST00000520233 ESDP10768 282 aa12.17□□□□□ -0.46
SDC2-205ENST00000520233 WFDC10BQ8IUB3 73 aa12.17□□□□□ -0.46
SDC2-205ENST00000520233 LINC01546A6NGU7 62 aa12.16□□□□□ -0.46
SDC2-205ENST00000520233 CHCHD5Q9BSY4 110 aa12.16□□□□□ -0.46
SDC2-205ENST00000520233 H7C423 109 aa12.15□□□□□ -0.46
SDC2-205ENST00000520233 SIVA1O15304 175 aa12.15□□□□□ -0.46
SDC2-205ENST00000520233 LY6G6CO95867 125 aa12.15□□□□□ -0.46
SDC2-205ENST00000520233 PKIAP61925 76 aa12.15□□□□□ -0.46
SDC2-205ENST00000520233 Q0VG73 95 aa12.15□□□□□ -0.46
SDC2-205ENST00000520233 FA2HQ7L5A8 372 aa12.15□□□□□ -0.46
SDC2-205ENST00000520233 NIT1Q86X76 327 aa12.15□□□□□ -0.46
SDC2-205ENST00000520233 Q9H8V8 135 aa12.15□□□□□ -0.46
SDC2-205ENST00000520233 RAB5BP61020 215 aa12.14□□□□□ -0.47
SDC2-205ENST00000520233 LAGE3Q14657 143 aa12.14□□□□□ -0.47
SDC2-205ENST00000520233 ORMDL2Q53FV1 153 aa12.14□□□□□ -0.47
SDC2-205ENST00000520233 C1orf196B1AJZ1 125 aa12.13□□□□□ -0.47
SDC2-205ENST00000520233 UBE2L6O14933 153 aa12.13□□□□□ -0.47
SDC2-205ENST00000520233 HIST1H2BKO60814 126 aa12.13□□□□□ -0.47
SDC2-205ENST00000520233 HIST1H2BJP06899 126 aa12.13□□□□□ -0.47
SDC2-205ENST00000520233 LINC00614P0C842 121 aa12.13□□□□□ -0.47
SDC2-205ENST00000520233 DNAH10OSP0CZ25 163 aa12.13□□□□□ -0.47
SDC2-205ENST00000520233 HIST1H2BOP23527 126 aa12.13□□□□□ -0.47
SDC2-205ENST00000520233 HIST1H2BBP33778 126 aa12.13□□□□□ -0.47
SDC2-205ENST00000520233 HIST1H2BDP58876 126 aa12.13□□□□□ -0.47
SDC2-205ENST00000520233 HIST1H2BCP62807 126 aa12.13□□□□□ -0.47
SDC2-205ENST00000520233 GAGE6Q13070 117 aa12.13□□□□□ -0.47
SDC2-205ENST00000520233 HIST2H2BEQ16778 126 aa12.13□□□□□ -0.47
SDC2-205ENST00000520233 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.13□□□□□ -0.47
SDC2-205ENST00000520233 C20orf203Q8NBC4 194 aa12.13□□□□□ -0.47
SDC2-205ENST00000520233 HIST1H2BHQ93079 126 aa12.13□□□□□ -0.47
SDC2-205ENST00000520233 TMEM18Q96B42 140 aa12.13□□□□□ -0.47
SDC2-205ENST00000520233 URB1-AS1Q96HZ7 61 aa12.13□□□□□ -0.47
SDC2-205ENST00000520233 HIST1H2BNQ99877 126 aa12.13□□□□□ -0.47
SDC2-205ENST00000520233 HIST1H2BMQ99879 126 aa12.13□□□□□ -0.47
SDC2-205ENST00000520233 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.12□□□□□ -0.47
SDC2-205ENST00000520233 IGKV2-29A2NJV5 120 aaPredicted RBP12.12□□□□□ -0.47
SDC2-205ENST00000520233 TMEM262E9PQX1 116 aa12.12□□□□□ -0.47
SDC2-205ENST00000520233 LINC01556Q5JQF7 62 aa12.12□□□□□ -0.47
SDC2-205ENST00000520233 BAGE3Q86Y29 109 aa12.12□□□□□ -0.47
SDC2-205ENST00000520233 AP5S1Q9NUS5 200 aa12.12□□□□□ -0.47
SDC2-205ENST00000520233 A0A087WX48 190 aa12.1□□□□□ -0.47
SDC2-205ENST00000520233 LCE6AA0A183 80 aa12.1□□□□□ -0.47
SDC2-205ENST00000520233 G0S2P27469 103 aa12.1□□□□□ -0.47
SDC2-205ENST00000520233 RNASEKQ6P5S7 137 aaKnown RBP12.1□□□□□ -0.47
SDC2-205ENST00000520233 CHCHD1Q96BP2 118 aaKnown RBP12.1□□□□□ -0.47
SDC2-205ENST00000520233 A0A1B0GUV1 79 aa12.09□□□□□ -0.47
SDC2-205ENST00000520233 K7EP13 123 aa12.09□□□□□ -0.47
SDC2-205ENST00000520233 IGHV3-30P01768 117 aa12.09□□□□□ -0.47
SDC2-205ENST00000520233 IGHV3-33P01772 117 aa12.09□□□□□ -0.47
SDC2-205ENST00000520233 IGHV3-30-3P0DP02 117 aa12.09□□□□□ -0.47
SDC2-205ENST00000520233 IGHV3-30-5P0DP03 117 aa12.09□□□□□ -0.47
SDC2-205ENST00000520233 FGF6P10767 208 aa12.09□□□□□ -0.47
SDC2-205ENST00000520233 SMAGPQ0VAQ4 97 aa12.09□□□□□ -0.47
SDC2-205ENST00000520233 MPV17L2Q567V2 206 aa12.09□□□□□ -0.47
SDC2-205ENST00000520233 MRPL52Q86TS9 123 aaKnown RBP12.09□□□□□ -0.47
SDC2-205ENST00000520233 ZNF25P17030 456 aaPredicted RBP12.08□□□□□ -0.48
SDC2-205ENST00000520233 RBX1P62877 108 aa12.08□□□□□ -0.48
SDC2-205ENST00000520233 AMMECR1LQ6DCA0 310 aa12.08□□□□□ -0.48
SDC2-205ENST00000520233 C2orf66Q6UXQ4 117 aa12.08□□□□□ -0.48
SDC2-205ENST00000520233 Q8N3U1 123 aa12.08□□□□□ -0.48
SDC2-205ENST00000520233 CYSLTR1Q9Y271 337 aa12.08□□□□□ -0.48
SDC2-205ENST00000520233 PLECQ15149 4684 aaKnown RBP12.08□□□□□ -0.48
SDC2-205ENST00000520233 TRAV9-2A0A087WT02 112 aa12.07□□□□□ -0.48
SDC2-205ENST00000520233 BTF3P20290 206 aaKnown RBP12.07□□□□□ -0.48
SDC2-205ENST00000520233 RPL39P62891 51 aaKnown RBP12.07□□□□□ -0.48
SDC2-205ENST00000520233 TIMM21Q9BVV7 248 aa12.07□□□□□ -0.48
SDC2-205ENST00000520233 UBE2D4Q9Y2X8 147 aa12.07□□□□□ -0.48
SDC2-205ENST00000520233 NBDYA0A0U1RRE5 68 aa12.06□□□□□ -0.48
SDC2-205ENST00000520233 LINC01549A6NIU2 74 aa12.06□□□□□ -0.48
SDC2-205ENST00000520233 SERF1AO75920 110 aa12.06□□□□□ -0.48
SDC2-205ENST00000520233 LINC00310P59036 64 aa12.06□□□□□ -0.48
SDC2-205ENST00000520233 C10orf126Q8N4M7 172 aa12.06□□□□□ -0.48
SDC2-205ENST00000520233 Q8N976 141 aa12.06□□□□□ -0.48
SDC2-205ENST00000520233 TOMM6Q96B49 74 aa12.06□□□□□ -0.48
SDC2-205ENST00000520233 TMEM101Q96IK0 257 aa12.06□□□□□ -0.48
SDC2-205ENST00000520233 SPANXA1Q9NS26 97 aa12.06□□□□□ -0.48
SDC2-205ENST00000520233 CSDC2Q9Y534 153 aaKnown RBP12.06□□□□□ -0.48
SDC2-205ENST00000520233 TENM2Q9NT68 2774 aa12.05□□□□□ -0.48
SDC2-205ENST00000520233 IGLV4-60A0A075B6I1 120 aa12.05□□□□□ -0.48
SDC2-205ENST00000520233 TTC32Q5I0X7 151 aa12.05□□□□□ -0.48
SDC2-205ENST00000520233 A0A096LNJ9 63 aa12.04□□□□□ -0.48
SDC2-205ENST00000520233 HSBP1O75506 76 aa12.04□□□□□ -0.48
SDC2-205ENST00000520233 DGAT2L7PQ6IED9 249 aa12.04□□□□□ -0.48
SDC2-205ENST00000520233 OR5A1Q8NGJ0 315 aa12.04□□□□□ -0.48
SDC2-205ENST00000520233 PYGO1Q9Y3Y4 419 aa12.04□□□□□ -0.48
SDC2-205ENST00000520233 HBDP02042 147 aa12.03□□□□□ -0.48
SDC2-205ENST00000520233 ANGP03950 147 aaKnown RBP12.03□□□□□ -0.48
SDC2-205ENST00000520233 PMCHL1Q16048 86 aa12.03□□□□□ -0.48
SDC2-205ENST00000520233 COA6Q5JTJ3 125 aaKnown RBP12.03□□□□□ -0.48
SDC2-205ENST00000520233 KLK12Q9UKR0 248 aa12.03□□□□□ -0.48
SDC2-205ENST00000520233 IBA57-AS1B1ANH7 110 aa12.02□□□□□ -0.49
SDC2-205ENST00000520233 NUPR1O60356 82 aa12.02□□□□□ -0.49
SDC2-205ENST00000520233 NDUFA6P56556 154 aa12.02□□□□□ -0.49
SDC2-205ENST00000520233 KRTAP1-5Q9BYS1 174 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms