RNA–Protein interactions for RNA: ENST00000520102.1

CHMP7-208, Transcript of charged multivesicular body protein 7, human

TSL 4

Gene CHMP7, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHMP7-208	ENST00000520102	IGKV3OR2-268	A0A0C4DH90	116 aa		4.95	□□□□□ -1.62
CHMP7-208	ENST00000520102	RAB19	A4D1S5	217 aa		4.95	□□□□□ -1.62
CHMP7-208	ENST00000520102	GAGE12H	A6NDE8	117 aa		4.95	□□□□□ -1.62
CHMP7-208	ENST00000520102	UBE2L6	O14933	153 aa		4.95	□□□□□ -1.62
CHMP7-208	ENST00000520102	BCL2L11	O43521	198 aa		4.95	□□□□□ -1.62
CHMP7-208	ENST00000520102	TRGC1	P0CF51	173 aa		4.95	□□□□□ -1.62
CHMP7-208	ENST00000520102	NTF3	P20783	257 aa		4.95	□□□□□ -1.62
CHMP7-208	ENST00000520102	AMT	P48728	403 aa		4.95	□□□□□ -1.62
CHMP7-208	ENST00000520102	SULT1A2	P50226	295 aa		4.95	□□□□□ -1.62
CHMP7-208	ENST00000520102	RPS20	P60866	119 aa	Known RBP	4.95	□□□□□ -1.62
CHMP7-208	ENST00000520102	COTL1	Q14019	142 aa		4.95	□□□□□ -1.62
CHMP7-208	ENST00000520102	HIGD2B	Q4VC39	106 aa		4.95	□□□□□ -1.62
CHMP7-208	ENST00000520102	LYZL1	Q6UWQ5	148 aa		4.95	□□□□□ -1.62
CHMP7-208	ENST00000520102	DPH3P1	Q9H4G8	78 aa		4.95	□□□□□ -1.62
CHMP7-208	ENST00000520102	MANBAL	Q9NQG1	85 aa		4.95	□□□□□ -1.62
CHMP7-208	ENST00000520102	TRBV20OR9-2	A0A075B6H5	130 aa		4.94	□□□□□ -1.62
CHMP7-208	ENST00000520102	IGKV2-24	A0A0C4DH68	120 aa		4.94	□□□□□ -1.62
CHMP7-208	ENST00000520102	KANTR	A0A1W2PQU2	76 aa		4.94	□□□□□ -1.62
CHMP7-208	ENST00000520102	HMSD	A8MTL9	139 aa		4.94	□□□□□ -1.62
CHMP7-208	ENST00000520102		F2Z2F3	143 aa		4.94	□□□□□ -1.62
CHMP7-208	ENST00000520102	NDUFS6	O75380	124 aa	Known RBP	4.94	□□□□□ -1.62
CHMP7-208	ENST00000520102	RPS10	P46783	165 aa	Known RBP	4.94	□□□□□ -1.62
CHMP7-208	ENST00000520102	GNG4	P50150	75 aa		4.94	□□□□□ -1.62
CHMP7-208	ENST00000520102	ODF1	Q14990	250 aa		4.94	□□□□□ -1.62
CHMP7-208	ENST00000520102	RGS21	Q2M5E4	152 aa		4.94	□□□□□ -1.62
CHMP7-208	ENST00000520102	MAJIN	Q3KP22	176 aa		4.94	□□□□□ -1.62
CHMP7-208	ENST00000520102	PRSS3P2	Q8NHM4	247 aa		4.94	□□□□□ -1.62
CHMP7-208	ENST00000520102	C7orf33	Q8WU49	177 aa		4.94	□□□□□ -1.62
CHMP7-208	ENST00000520102	TRAV1-1	A0A0B4J248	108 aa		4.93	□□□□□ -1.62
CHMP7-208	ENST00000520102	TRAV26-2	A0A0B4J265	109 aa		4.93	□□□□□ -1.62
CHMP7-208	ENST00000520102	XKRY2	A2RUG3	117 aa		4.93	□□□□□ -1.62
CHMP7-208	ENST00000520102	IFNA1	P01562	189 aa		4.93	□□□□□ -1.62
CHMP7-208	ENST00000520102	CTRL	P40313	264 aa		4.93	□□□□□ -1.62
CHMP7-208	ENST00000520102	PRR3	P79522	188 aa	Known RBP	4.93	□□□□□ -1.62
CHMP7-208	ENST00000520102	CFAP161	Q6P656	301 aa		4.93	□□□□□ -1.62
CHMP7-208	ENST00000520102		Q6ZNX1	250 aa		4.93	□□□□□ -1.62
CHMP7-208	ENST00000520102	C9orf62	Q8N4C0	152 aa		4.93	□□□□□ -1.62
CHMP7-208	ENST00000520102	STPG4	Q8N801	248 aa		4.93	□□□□□ -1.62
CHMP7-208	ENST00000520102	GATD1	Q8NB37	220 aa		4.93	□□□□□ -1.62
CHMP7-208	ENST00000520102	GTSF1	Q8WW33	167 aa		4.93	□□□□□ -1.62
CHMP7-208	ENST00000520102	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.93	□□□□□ -1.62
CHMP7-208	ENST00000520102	SMIM12	Q96EX1	92 aa		4.93	□□□□□ -1.62
CHMP7-208	ENST00000520102	LINC01600	Q96MT4	127 aa		4.93	□□□□□ -1.62
CHMP7-208	ENST00000520102	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	4.92	□□□□□ -1.62
CHMP7-208	ENST00000520102		A0A096LNI7	61 aa		4.92	□□□□□ -1.62
CHMP7-208	ENST00000520102	GVQW2	A0A096LPI5	108 aa	Predicted RBP	4.92	□□□□□ -1.62
CHMP7-208	ENST00000520102	IGKV2-29	A2NJV5	120 aa	Predicted RBP	4.92	□□□□□ -1.62
CHMP7-208	ENST00000520102	EIF5A	P63241	154 aa	Known RBP	4.92	□□□□□ -1.62
CHMP7-208	ENST00000520102	MEF2B	Q02080	365 aa	Predicted RBP	4.92	□□□□□ -1.62
CHMP7-208	ENST00000520102	TWIST1	Q15672	202 aa		4.92	□□□□□ -1.62
CHMP7-208	ENST00000520102	NUDT10	Q8NFP7	164 aa		4.92	□□□□□ -1.62
CHMP7-208	ENST00000520102	LYPD6B	Q8NI32	183 aa		4.92	□□□□□ -1.62
CHMP7-208	ENST00000520102	RPL39L	Q96EH5	51 aa	Known RBP	4.92	□□□□□ -1.62
CHMP7-208	ENST00000520102	NUDT11	Q96G61	164 aa		4.92	□□□□□ -1.62
CHMP7-208	ENST00000520102	CNFN	Q9BYD5	112 aa		4.92	□□□□□ -1.62
CHMP7-208	ENST00000520102	PDE6D	O43924	150 aa		4.91	□□□□□ -1.62
CHMP7-208	ENST00000520102	FOXI1	Q12951	378 aa		4.91	□□□□□ -1.62
CHMP7-208	ENST00000520102	AMMECR1L	Q6DCA0	310 aa		4.91	□□□□□ -1.62
CHMP7-208	ENST00000520102	RNASEK	Q6P5S7	137 aa	Known RBP	4.91	□□□□□ -1.62
CHMP7-208	ENST00000520102	MED9	Q9NWA0	146 aa		4.91	□□□□□ -1.62
CHMP7-208	ENST00000520102		A0A0J9YXV3	536 aa		4.9	□□□□□ -1.63
CHMP7-208	ENST00000520102	TEX46	H3BTG2	121 aa		4.9	□□□□□ -1.63
CHMP7-208	ENST00000520102		H7C423	109 aa		4.9	□□□□□ -1.63
CHMP7-208	ENST00000520102		K7EN84	100 aa		4.9	□□□□□ -1.63
CHMP7-208	ENST00000520102	NCR2	O95944	276 aa		4.9	□□□□□ -1.63
CHMP7-208	ENST00000520102	APCS	P02743	223 aa		4.9	□□□□□ -1.63
CHMP7-208	ENST00000520102	FGF6	P10767	208 aa		4.9	□□□□□ -1.63
CHMP7-208	ENST00000520102	FOXA3	P55318	350 aa	Predicted RBP	4.9	□□□□□ -1.63
CHMP7-208	ENST00000520102	LINC00526	Q96FQ7	95 aa		4.9	□□□□□ -1.63
CHMP7-208	ENST00000520102	RNASE7	Q9H1E1	156 aa	Known RBP	4.9	□□□□□ -1.63
CHMP7-208	ENST00000520102	RPP21	Q9H633	154 aa	Known RBP	4.9	□□□□□ -1.63
CHMP7-208	ENST00000520102	BIN3	Q9NQY0	253 aa		4.9	□□□□□ -1.63
CHMP7-208	ENST00000520102	SDHAF1	A6NFY7	115 aa		4.89	□□□□□ -1.63
CHMP7-208	ENST00000520102	BCL2	P10415	239 aa		4.89	□□□□□ -1.63
CHMP7-208	ENST00000520102	XCL1	P47992	114 aa		4.89	□□□□□ -1.63
CHMP7-208	ENST00000520102	KRTAP10-8	P60410	259 aa		4.89	□□□□□ -1.63
CHMP7-208	ENST00000520102	OR5A1	Q8NGJ0	315 aa		4.89	□□□□□ -1.63
CHMP7-208	ENST00000520102	LINC00959	A0A1B0GUT2	108 aa		4.88	□□□□□ -1.63
CHMP7-208	ENST00000520102	FAM231B	A6NCW3	169 aa		4.88	□□□□□ -1.63
CHMP7-208	ENST00000520102	CCL25	O15444	150 aa		4.88	□□□□□ -1.63
CHMP7-208	ENST00000520102	GAS8-AS1	O95177	125 aa		4.88	□□□□□ -1.63
CHMP7-208	ENST00000520102	ZNF25	P17030	456 aa	Predicted RBP	4.88	□□□□□ -1.63
CHMP7-208	ENST00000520102	EIF5AL1	Q6IS14	154 aa	Known RBP	4.88	□□□□□ -1.63
CHMP7-208	ENST00000520102	SPINK6	Q6UWN8	80 aa		4.88	□□□□□ -1.63
CHMP7-208	ENST00000520102	OCC1	Q8TAD7	63 aa		4.88	□□□□□ -1.63
CHMP7-208	ENST00000520102	CARD19	Q96LW7	228 aa		4.88	□□□□□ -1.63
CHMP7-208	ENST00000520102	LINC00474	Q9P2X8	69 aa		4.88	□□□□□ -1.63
CHMP7-208	ENST00000520102	LPA	P08519	4548 aa		4.87	□□□□□ -1.63
CHMP7-208	ENST00000520102	IGHV1-58	A0A0C4DH39	117 aa		4.87	□□□□□ -1.63
CHMP7-208	ENST00000520102		I3L3M4	83 aa		4.87	□□□□□ -1.63
CHMP7-208	ENST00000520102	ESD	P10768	282 aa		4.87	□□□□□ -1.63
CHMP7-208	ENST00000520102	PMCH	P20382	165 aa		4.87	□□□□□ -1.63
CHMP7-208	ENST00000520102	SRSF9	Q13242	221 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
CHMP7-208	ENST00000520102	REG3G	Q6UW15	175 aa		4.87	□□□□□ -1.63
CHMP7-208	ENST00000520102	TEX261	Q6UWH6	196 aa		4.87	□□□□□ -1.63
CHMP7-208	ENST00000520102	SMIM15	Q7Z3B0	74 aa		4.87	□□□□□ -1.63
CHMP7-208	ENST00000520102	BTF3L4	Q96K17	158 aa		4.87	□□□□□ -1.63
CHMP7-208	ENST00000520102	TRBV6-5	A0A0K0K1A5	114 aa		4.86	□□□□□ -1.63
CHMP7-208	ENST00000520102	ZNF561-AS1	K7EIQ3	104 aa		4.86	□□□□□ -1.63
CHMP7-208	ENST00000520102	TSHB	P01222	138 aa		4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms