RNA–Protein interactions for RNA: ENST00000519835.5

CPEB4-207, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 2,257 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-207ENST00000519835 GAGE5Q13069 117 aa8.74□□□□□ -1.01
CPEB4-207ENST00000519835 GAGE6Q13070 117 aa8.74□□□□□ -1.01
CPEB4-207ENST00000519835 TMEM61Q8N0U2 210 aa8.74□□□□□ -1.01
CPEB4-207ENST00000519835 CHCHD7Q9BUK0 85 aa8.74□□□□□ -1.01
CPEB4-207ENST00000519835 IGHV3-73A0A0B4J1V6 119 aa8.74□□□□□ -1.01
CPEB4-207ENST00000519835 RBMY1A1P0DJD3 496 aaKnown RBP8.74□□□□□ -1.01
CPEB4-207ENST00000519835 RBMY1CP0DJD4 496 aa8.74□□□□□ -1.01
CPEB4-207ENST00000519835 RBMY1FQ15415 496 aaKnown RBP8.74□□□□□ -1.01
CPEB4-207ENST00000519835 ADAMTSL4-AS1Q5T5F5 129 aa8.74□□□□□ -1.01
CPEB4-207ENST00000519835 IGF2RP11717 2491 aa8.74□□□□□ -1.01
CPEB4-207ENST00000519835 TRAV4A0A0B4J268 109 aa8.73□□□□□ -1.01
CPEB4-207ENST00000519835 FAM240AA0A1B0GVK7 77 aa8.73□□□□□ -1.01
CPEB4-207ENST00000519835 H7C423 109 aa8.73□□□□□ -1.01
CPEB4-207ENST00000519835 LST1O00453 97 aa8.73□□□□□ -1.01
CPEB4-207ENST00000519835 NDUFV3P56181 108 aaKnown RBP8.73□□□□□ -1.01
CPEB4-207ENST00000519835 LY6DQ14210 128 aa8.73□□□□□ -1.01
CPEB4-207ENST00000519835 CEMP1Q6PRD7 247 aaPredicted RBP8.73□□□□□ -1.01
CPEB4-207ENST00000519835 C10orf99Q6UWK7 81 aa8.73□□□□□ -1.01
CPEB4-207ENST00000519835 DNAJC30Q96LL9 226 aa8.73□□□□□ -1.01
CPEB4-207ENST00000519835 IGHV4-59P01825 116 aa8.73□□□□□ -1.01
CPEB4-207ENST00000519835 HOXD3P31249 432 aaPredicted RBP8.73□□□□□ -1.01
CPEB4-207ENST00000519835 DUX3Q96PT4 197 aa8.73□□□□□ -1.01
CPEB4-207ENST00000519835 AVPP01185 164 aa8.72□□□□□ -1.01
CPEB4-207ENST00000519835 GNLYP22749 145 aa8.72□□□□□ -1.01
CPEB4-207ENST00000519835 RNASE13Q5GAN3 156 aaKnown RBP8.72□□□□□ -1.01
CPEB4-207ENST00000519835 TTC32Q5I0X7 151 aa8.72□□□□□ -1.01
CPEB4-207ENST00000519835 SVEP1Q4LDE5 3571 aa8.72□□□□□ -1.01
CPEB4-207ENST00000519835 NDUFA1O15239 70 aa8.71□□□□□ -1.01
CPEB4-207ENST00000519835 PROK1P58294 105 aa8.71□□□□□ -1.01
CPEB4-207ENST00000519835 TIRAPP58753 221 aa8.71□□□□□ -1.01
CPEB4-207ENST00000519835 DEFB112Q30KQ8 113 aa8.71□□□□□ -1.01
CPEB4-207ENST00000519835 C15orf53Q8NAA6 179 aa8.71□□□□□ -1.01
CPEB4-207ENST00000519835 DUX5Q96PT3 197 aa8.71□□□□□ -1.01
CPEB4-207ENST00000519835 IGLV5-45A0A087WSX0 123 aa8.71□□□□□ -1.02
CPEB4-207ENST00000519835 CRLF1O75462 422 aa8.71□□□□□ -1.02
CPEB4-207ENST00000519835 NHLRC4P0CG21 123 aaPredicted RBP8.71□□□□□ -1.02
CPEB4-207ENST00000519835 HTN1P15515 57 aa8.71□□□□□ -1.02
CPEB4-207ENST00000519835 DEFB121Q5J5C9 76 aa8.71□□□□□ -1.02
CPEB4-207ENST00000519835 UBE2E2Q96LR5 201 aa8.71□□□□□ -1.02
CPEB4-207ENST00000519835 ASH1LQ9NR48 2969 aaKnown RBP8.71□□□□□ -1.02
CPEB4-207ENST00000519835 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.7□□□□□ -1.02
CPEB4-207ENST00000519835 IGKV2-29A2NJV5 120 aaPredicted RBP8.7□□□□□ -1.02
CPEB4-207ENST00000519835 KNCNA6PVL3 124 aa8.7□□□□□ -1.02
CPEB4-207ENST00000519835 CIRBPQ14011 172 aaKnown RBP8.7□□□□□ -1.02
CPEB4-207ENST00000519835 COPS9Q8WXC6 57 aa8.7□□□□□ -1.02
CPEB4-207ENST00000519835 LINC00467Q9BRT7 94 aa8.7□□□□□ -1.02
CPEB4-207ENST00000519835 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.7□□□□□ -1.023e-8■■■■□ 23.4
CPEB4-207ENST00000519835 IGHV3-53P01767 116 aa8.7□□□□□ -1.02
CPEB4-207ENST00000519835 DEFB131AP59861 70 aa8.7□□□□□ -1.02
CPEB4-207ENST00000519835 CLEC2BQ92478 149 aa8.7□□□□□ -1.02
CPEB4-207ENST00000519835 ZFHX3Q15911 3703 aa8.69□□□□□ -1.02
CPEB4-207ENST00000519835 DSCR9P59020 149 aa8.69□□□□□ -1.02
CPEB4-207ENST00000519835 NPC2P61916 151 aa8.69□□□□□ -1.02
CPEB4-207ENST00000519835 A8MZ25 164 aa8.68□□□□□ -1.02
CPEB4-207ENST00000519835 PRORYQ9H606 182 aa8.68□□□□□ -1.02
CPEB4-207ENST00000519835 VPREB3Q9UKI3 123 aa8.68□□□□□ -1.02
CPEB4-207ENST00000519835 RBMY1BA6NDE4 496 aaKnown RBP8.68□□□□□ -1.02
CPEB4-207ENST00000519835 RBMY1EA6NEQ0 496 aaKnown RBP8.68□□□□□ -1.02
CPEB4-207ENST00000519835 GAGE12JA6NER3 117 aa8.68□□□□□ -1.02
CPEB4-207ENST00000519835 J3QLI3 93 aa8.68□□□□□ -1.02
CPEB4-207ENST00000519835 GAGE7O76087 117 aa8.68□□□□□ -1.02
CPEB4-207ENST00000519835 RBMY1DP0C7P1 496 aaKnown RBP8.68□□□□□ -1.02
CPEB4-207ENST00000519835 GAGE12FP0CL80 117 aa8.68□□□□□ -1.02
CPEB4-207ENST00000519835 GAGE12GP0CL81 117 aa8.68□□□□□ -1.02
CPEB4-207ENST00000519835 GAGE12IP0CL82 117 aa8.68□□□□□ -1.02
CPEB4-207ENST00000519835 GAGE4Q13068 117 aa8.68□□□□□ -1.02
CPEB4-207ENST00000519835 Q6ZSN1 163 aa8.68□□□□□ -1.02
CPEB4-207ENST00000519835 CDKN2A-AS1Q9UH64 79 aa8.68□□□□□ -1.02
CPEB4-207ENST00000519835 HERVK_113P63121 156 aa8.67□□□□□ -1.02
CPEB4-207ENST00000519835 BEAN1Q3B7T3 259 aa8.67□□□□□ -1.02
CPEB4-207ENST00000519835 Q6ZSV7 163 aa8.67□□□□□ -1.02
CPEB4-207ENST00000519835 LINC01356Q8N9X3 169 aa8.67□□□□□ -1.02
CPEB4-207ENST00000519835 TMEM101Q96IK0 257 aa8.67□□□□□ -1.02
CPEB4-207ENST00000519835 SS18L2Q9UHA2 77 aa8.67□□□□□ -1.02
CPEB4-207ENST00000519835 RS1O15537 224 aa8.66□□□□□ -1.02
CPEB4-207ENST00000519835 DGAT2L7PQ6IED9 249 aa8.66□□□□□ -1.02
CPEB4-207ENST00000519835 C11orf72Q8NBR9 251 aa8.66□□□□□ -1.02
CPEB4-207ENST00000519835 IGLV5-39A0A0G2JS06 123 aa8.66□□□□□ -1.02
CPEB4-207ENST00000519835 B5MCH6 92 aa8.66□□□□□ -1.02
CPEB4-207ENST00000519835 INSP01308 110 aa8.66□□□□□ -1.02
CPEB4-207ENST00000519835 ZNF702PQ9H963 129 aa8.66□□□□□ -1.02
CPEB4-207ENST00000519835 LINC00308Q8TCZ7 52 aa8.65□□□□□ -1.02
CPEB4-207ENST00000519835 PEMTQ9UBM1 199 aa8.65□□□□□ -1.02
CPEB4-207ENST00000519835 Q9UF83 564 aa8.65□□□□□ -1.02
CPEB4-207ENST00000519835 SORL1Q92673 2214 aa8.65□□□□□ -1.02
CPEB4-207ENST00000519835 IGHV3-38A0A0C4DH36 116 aa8.65□□□□□ -1.03
CPEB4-207ENST00000519835 COX7A2LO14548 114 aa8.65□□□□□ -1.03
CPEB4-207ENST00000519835 ACYP1P07311 99 aa8.65□□□□□ -1.03
CPEB4-207ENST00000519835 FAM19A3Q7Z5A8 133 aa8.65□□□□□ -1.03
CPEB4-207ENST00000519835 LINC01587Q99440 93 aa8.65□□□□□ -1.03
CPEB4-207ENST00000519835 TRBV7-7A0A0K0K1E9 115 aa8.64□□□□□ -1.03
CPEB4-207ENST00000519835 SLURP1P55000 103 aa8.64□□□□□ -1.03
CPEB4-207ENST00000519835 DAND5Q8N907 189 aa8.64□□□□□ -1.03
CPEB4-207ENST00000519835 CITED2Q99967 270 aaPredicted RBP8.64□□□□□ -1.03
CPEB4-207ENST00000519835 Q9H8V8 135 aa8.64□□□□□ -1.03
CPEB4-207ENST00000519835 PPDPFQ9H3Y8 114 aa8.64□□□□□ -1.03
CPEB4-207ENST00000519835 MAP6D1Q9H9H5 199 aa8.64□□□□□ -1.03
CPEB4-207ENST00000519835 IGHV3OR16-12A0A075B7B8 117 aa8.63□□□□□ -1.03
CPEB4-207ENST00000519835 CCDC179H3BU77 68 aa8.63□□□□□ -1.03
CPEB4-207ENST00000519835 PRM2P04554 102 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms