RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 VPS13DQ5THJ4 4388 aa-1.31□□□□□ -2.62
PCM1-208ENST00000518877 I3L2K1 104 aa-1.31□□□□□ -2.62
PCM1-208ENST00000518877 TNFP01375 233 aa-1.31□□□□□ -2.62
PCM1-208ENST00000518877 MIC13Q5XKP0 118 aa-1.31□□□□□ -2.62
PCM1-208ENST00000518877 FXYD6Q9H0Q3 95 aa-1.31□□□□□ -2.62
PCM1-208ENST00000518877 NPVFQ9HCQ7 196 aa-1.31□□□□□ -2.62
PCM1-208ENST00000518877 ITPR3Q14573 2671 aa-1.31□□□□□ -2.62
PCM1-208ENST00000518877 TACC2O95359 2948 aa-1.31□□□□□ -2.62
PCM1-208ENST00000518877 LRP6O75581 1613 aa-1.32□□□□□ -2.62
PCM1-208ENST00000518877 DOPEY1Q5JWR5 2465 aa-1.32□□□□□ -2.62
PCM1-208ENST00000518877 TRAV36DV7A0A075B6V5 113 aa-1.32□□□□□ -2.62
PCM1-208ENST00000518877 TRBV6-1A0A0K0K1D8 114 aa-1.32□□□□□ -2.62
PCM1-208ENST00000518877 M0R129 80 aa-1.32□□□□□ -2.62
PCM1-208ENST00000518877 COX6B1P14854 86 aa-1.32□□□□□ -2.62
PCM1-208ENST00000518877 UBE2G1P62253 170 aa-1.32□□□□□ -2.62
PCM1-208ENST00000518877 TFAMQ00059 246 aaKnown RBP-1.32□□□□□ -2.62
PCM1-208ENST00000518877 PIGYQ3MUY2 71 aa-1.32□□□□□ -2.62
PCM1-208ENST00000518877 C9orf116Q5BN46 136 aaPredicted RBP-1.32□□□□□ -2.62
PCM1-208ENST00000518877 HIGD1AQ9Y241 93 aa-1.32□□□□□ -2.62
PCM1-208ENST00000518877 HECTD1Q9ULT8 2610 aa-1.32□□□□□ -2.62
PCM1-208ENST00000518877 ZNF609O15014 1411 aa-1.32□□□□□ -2.62
PCM1-208ENST00000518877 PBRM1Q86U86 1689 aa-1.32□□□□□ -2.62
PCM1-208ENST00000518877 FAM92AA1XBS5 289 aa-1.33□□□□□ -2.62
PCM1-208ENST00000518877 PIRTP0C851 137 aa-1.33□□□□□ -2.62
PCM1-208ENST00000518877 WDR7Q9Y4E6 1490 aa-1.33□□□□□ -2.62
PCM1-208ENST00000518877 DNAJC13O75165 2243 aa-1.34□□□□□ -2.62
PCM1-208ENST00000518877 ERCC6L2Q5T890 1561 aa-1.34□□□□□ -2.62
PCM1-208ENST00000518877 AKAP9Q99996 3911 aa-1.34□□□□□ -2.62
PCM1-208ENST00000518877 A0A1B0GV72 72 aa-1.34□□□□□ -2.62
PCM1-208ENST00000518877 PITX3O75364 302 aa-1.34□□□□□ -2.62
PCM1-208ENST00000518877 FABP1P07148 127 aa-1.34□□□□□ -2.62
PCM1-208ENST00000518877 SCTP09683 121 aa-1.34□□□□□ -2.62
PCM1-208ENST00000518877 S100GP29377 79 aa-1.34□□□□□ -2.62
PCM1-208ENST00000518877 CMPK1P30085 196 aa-1.34□□□□□ -2.62
PCM1-208ENST00000518877 BAGE3Q86Y29 109 aa-1.34□□□□□ -2.62
PCM1-208ENST00000518877 SDF2Q99470 211 aa-1.34□□□□□ -2.62
PCM1-208ENST00000518877 RPRMQ9NS64 109 aa-1.34□□□□□ -2.62
PCM1-208ENST00000518877 GOLGA4Q13439 2230 aaKnown RBP-1.34□□□□□ -2.62
PCM1-208ENST00000518877 TRBV20-1A0A075B6N2 111 aa-1.35□□□□□ -2.63
PCM1-208ENST00000518877 YPEL1O60688 119 aa-1.35□□□□□ -2.63
PCM1-208ENST00000518877 TCTE3Q8IZS6 198 aa-1.35□□□□□ -2.63
PCM1-208ENST00000518877 SPRR2FQ96RM1 72 aa-1.35□□□□□ -2.63
PCM1-208ENST00000518877 AGPAT4-IT1Q9H0P7 198 aa-1.35□□□□□ -2.63
PCM1-208ENST00000518877 LAMA2P24043 3122 aaKnown RBP-1.35□□□□□ -2.63
PCM1-208ENST00000518877 HTTP42858 3142 aa-1.35□□□□□ -2.63
PCM1-208ENST00000518877 PAPPAQ13219 1627 aa-1.36□□□□□ -2.63
PCM1-208ENST00000518877 A0A1B0GX51 115 aa-1.36□□□□□ -2.63
PCM1-208ENST00000518877 SMIM6P0DI80 62 aa-1.36□□□□□ -2.63
PCM1-208ENST00000518877 DEFB135Q30KP9 77 aa-1.36□□□□□ -2.63
PCM1-208ENST00000518877 VSTM2AQ8TAG5 236 aa-1.36□□□□□ -2.63
PCM1-208ENST00000518877 DNAH2Q9P225 4427 aa-1.36□□□□□ -2.63
PCM1-208ENST00000518877 SPTBN4Q9H254 2564 aa-1.37□□□□□ -2.63
PCM1-208ENST00000518877 FASNP49327 2511 aaKnown RBP-1.37□□□□□ -2.63
PCM1-208ENST00000518877 ZNF236Q9UL36 1845 aa-1.37□□□□□ -2.63
PCM1-208ENST00000518877 FAM236AA0A1B0GUQ0 79 aa-1.37□□□□□ -2.63
PCM1-208ENST00000518877 FAM236BA0A1B0GV22 79 aa-1.37□□□□□ -2.63
PCM1-208ENST00000518877 SPANXN1Q5VSR9 72 aa-1.37□□□□□ -2.63
PCM1-208ENST00000518877 SPTSSBQ8NFR3 76 aa-1.37□□□□□ -2.63
PCM1-208ENST00000518877 LINC00472Q9H8W2 130 aa-1.37□□□□□ -2.63
PCM1-208ENST00000518877 CDK5RAP2Q96SN8 1893 aa-1.37□□□□□ -2.63
PCM1-208ENST00000518877 DNAH9Q9NYC9 4486 aa-1.38□□□□□ -2.63
PCM1-208ENST00000518877 LAMA1P25391 3075 aa-1.38□□□□□ -2.63
PCM1-208ENST00000518877 ANKHD1Q8IWZ3 2542 aaKnown RBP-1.38□□□□□ -2.63
PCM1-208ENST00000518877 DEFB105AQ8NG35 78 aa-1.38□□□□□ -2.63
PCM1-208ENST00000518877 CENPHQ9H3R5 247 aa-1.38□□□□□ -2.63
PCM1-208ENST00000518877 LINC00312Q9Y6C7 94 aa-1.38□□□□□ -2.63
PCM1-208ENST00000518877 ARHGEF10O15013 1369 aa-1.38□□□□□ -2.63
PCM1-208ENST00000518877 SONP18583 2426 aaKnown RBP-1.39□□□□□ -2.63
PCM1-208ENST00000518877 CCL18P55774 89 aa-1.39□□□□□ -2.63
PCM1-208ENST00000518877 MYH6P13533 1939 aa-1.39□□□□□ -2.63
PCM1-208ENST00000518877 CUBNO60494 3623 aa-1.39□□□□□ -2.63
PCM1-208ENST00000518877 MYO18BQ8IUG5 2567 aa-1.4□□□□□ -2.63
PCM1-208ENST00000518877 H0YJX3 145 aa-1.4□□□□□ -2.63
PCM1-208ENST00000518877 DEFB112Q30KQ8 113 aa-1.4□□□□□ -2.63
PCM1-208ENST00000518877 S100A7L2Q5SY68 101 aa-1.4□□□□□ -2.63
PCM1-208ENST00000518877 RPL7L1Q6DKI1 246 aaKnown RBP-1.4□□□□□ -2.63
PCM1-208ENST00000518877 MAGOHBQ96A72 148 aaKnown RBP-1.4□□□□□ -2.63
PCM1-208ENST00000518877 DDA1Q9BW61 102 aa-1.4□□□□□ -2.63
PCM1-208ENST00000518877 GINS2Q9Y248 185 aa-1.4□□□□□ -2.63
PCM1-208ENST00000518877 TNRC18O15417 2968 aaPredicted RBP-1.4□□□□□ -2.63
PCM1-208ENST00000518877 RNF213Q63HN8 5207 aa-1.41□□□□□ -2.63
PCM1-208ENST00000518877 A6NIN4 97 aa-1.41□□□□□ -2.64
PCM1-208ENST00000518877 SKA2Q8WVK7 121 aaPredicted RBP-1.41□□□□□ -2.64
PCM1-208ENST00000518877 PRDM2Q13029 1718 aa-1.41□□□□□ -2.64
PCM1-208ENST00000518877 VPS13BQ7Z7G8 4022 aa-1.42□□□□□ -2.64
PCM1-208ENST00000518877 M0R135 149 aa-1.42□□□□□ -2.64
PCM1-208ENST00000518877 IGLC6P0CF74 106 aa-1.42□□□□□ -2.64
PCM1-208ENST00000518877 NCS1P62166 190 aa-1.42□□□□□ -2.64
PCM1-208ENST00000518877 ZNF818PQ6ZRF7 136 aa-1.42□□□□□ -2.64
PCM1-208ENST00000518877 MAFIPQ8WZ33 124 aa-1.42□□□□□ -2.64
PCM1-208ENST00000518877 KDM5AP29375 1690 aaKnown RBP-1.42□□□□□ -2.64
PCM1-208ENST00000518877 MYH8P13535 1937 aa-1.42□□□□□ -2.64
PCM1-208ENST00000518877 RYR2Q92736 4967 aa-1.42□□□□□ -2.64
PCM1-208ENST00000518877 LRRC37A2A6NM11 1700 aa-1.43□□□□□ -2.64
PCM1-208ENST00000518877 LRRC37A3O60309 1634 aa-1.43□□□□□ -2.64
PCM1-208ENST00000518877 DOCK1Q14185 1865 aa-1.43□□□□□ -2.64
PCM1-208ENST00000518877 PPP1R17O96001 155 aa-1.43□□□□□ -2.64
PCM1-208ENST00000518877 IFNA17P01571 189 aa-1.43□□□□□ -2.64
PCM1-208ENST00000518877 MT1AP04731 61 aa-1.43□□□□□ -2.64
PCM1-208ENST00000518877 RRAS2P62070 204 aaPredicted RBP-1.43□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms