RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 LINC00269Q8N2A0 174 aa8.75□□□□□ -1.01
VEGFA-219ENST00000518824 TMEM243Q9BU79 118 aa8.75□□□□□ -1.01
VEGFA-219ENST00000518824 FAM231BA6NCW3 169 aa8.74□□□□□ -1.01
VEGFA-219ENST00000518824 SMKR1H3BMG3 65 aa8.74□□□□□ -1.01
VEGFA-219ENST00000518824 RAB4AP20338 218 aa8.74□□□□□ -1.01
VEGFA-219ENST00000518824 SMIM15Q7Z3B0 74 aa8.74□□□□□ -1.01
VEGFA-219ENST00000518824 TMEM191AQ9H0A3 160 aa8.74□□□□□ -1.01
VEGFA-219ENST00000518824 PRR34Q9NV39 138 aa8.74□□□□□ -1.01
VEGFA-219ENST00000518824 FAM30AQ9NZY2 134 aa8.74□□□□□ -1.01
VEGFA-219ENST00000518824 SMIM27A0A1W2PRY6 76 aa8.73□□□□□ -1.01
VEGFA-219ENST00000518824 SDHAF1A6NFY7 115 aa8.73□□□□□ -1.01
VEGFA-219ENST00000518824 NCR2O95944 276 aa8.73□□□□□ -1.01
VEGFA-219ENST00000518824 AMTP48728 403 aa8.73□□□□□ -1.01
VEGFA-219ENST00000518824 COTL1Q14019 142 aa8.73□□□□□ -1.01
VEGFA-219ENST00000518824 BORCS7Q96B45 105 aa8.73□□□□□ -1.01
VEGFA-219ENST00000518824 RMI2Q96E14 147 aa8.73□□□□□ -1.01
VEGFA-219ENST00000518824 SMDT1Q9H4I9 107 aa8.73□□□□□ -1.01
VEGFA-219ENST00000518824 IGLV10-54A0A075B6I4 117 aa8.72□□□□□ -1.01
VEGFA-219ENST00000518824 CRPP02741 224 aa8.72□□□□□ -1.01
VEGFA-219ENST00000518824 Q0VG73 95 aa8.72□□□□□ -1.01
VEGFA-219ENST00000518824 RIGQ13278 110 aa8.72□□□□□ -1.01
VEGFA-219ENST00000518824 NTN5Q8WTR8 489 aaPredicted RBP8.72□□□□□ -1.01
VEGFA-219ENST00000518824 FRZBQ92765 325 aa8.72□□□□□ -1.01
VEGFA-219ENST00000518824 C1orf43Q9BWL3 253 aa8.72□□□□□ -1.01
VEGFA-219ENST00000518824 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.71□□□□□ -1.02
VEGFA-219ENST00000518824 TRBV6-5A0A0K0K1A5 114 aa8.71□□□□□ -1.02
VEGFA-219ENST00000518824 IGKV2-29A2NJV5 120 aaPredicted RBP8.71□□□□□ -1.02
VEGFA-219ENST00000518824 HLA-DQA1P01909 254 aa8.71□□□□□ -1.02
VEGFA-219ENST00000518824 Q8N1X5 172 aa8.71□□□□□ -1.02
VEGFA-219ENST00000518824 NAT8BQ9UHF3 227 aa8.71□□□□□ -1.02
VEGFA-219ENST00000518824 COX11Q9Y6N1 276 aa8.71□□□□□ -1.02
VEGFA-219ENST00000518824 DNAH8Q96JB1 4490 aa8.71□□□□□ -1.02
VEGFA-219ENST00000518824 A0A1B0GUV1 79 aa8.7□□□□□ -1.02
VEGFA-219ENST00000518824 PKIAP61925 76 aa8.7□□□□□ -1.02
VEGFA-219ENST00000518824 REG3AQ06141 175 aa8.7□□□□□ -1.02
VEGFA-219ENST00000518824 MIAQ16674 131 aa8.7□□□□□ -1.02
VEGFA-219ENST00000518824 TMEM70Q9BUB7 260 aa8.7□□□□□ -1.02
VEGFA-219ENST00000518824 TMEM242Q9NWH2 141 aa8.7□□□□□ -1.02
VEGFA-219ENST00000518824 TSHBP01222 138 aa8.69□□□□□ -1.02
VEGFA-219ENST00000518824 SMR3BP02814 79 aaPredicted RBP8.69□□□□□ -1.02
VEGFA-219ENST00000518824 CAMPP49913 170 aa8.69□□□□□ -1.02
VEGFA-219ENST00000518824 POLR2KP53803 58 aaKnown RBP8.69□□□□□ -1.02
VEGFA-219ENST00000518824 MRPL51Q4U2R6 128 aaKnown RBP8.69□□□□□ -1.02
VEGFA-219ENST00000518824 CLLU1Q5K131 121 aa8.69□□□□□ -1.02
VEGFA-219ENST00000518824 MRPL54Q6P161 138 aaKnown RBP8.69□□□□□ -1.02
VEGFA-219ENST00000518824 NRACQ8N912 160 aa8.69□□□□□ -1.02
VEGFA-219ENST00000518824 USP17L23D6RBM5 183 aa8.68□□□□□ -1.02
VEGFA-219ENST00000518824 I3L3M4 83 aa8.68□□□□□ -1.02
VEGFA-219ENST00000518824 UBE2L6O14933 153 aa8.68□□□□□ -1.02
VEGFA-219ENST00000518824 PMCHP20382 165 aa8.68□□□□□ -1.02
VEGFA-219ENST00000518824 RAB14P61106 215 aa8.68□□□□□ -1.02
VEGFA-219ENST00000518824 FAM104BQ5XKR9 115 aa8.68□□□□□ -1.02
VEGFA-219ENST00000518824 MRAP2Q96G30 205 aa8.68□□□□□ -1.02
VEGFA-219ENST00000518824 ST20Q9HBF5 79 aa8.68□□□□□ -1.02
VEGFA-219ENST00000518824 IGKV3OR2-268A0A0C4DH90 116 aa8.67□□□□□ -1.02
VEGFA-219ENST00000518824 A0A1B0GXF2 115 aa8.67□□□□□ -1.02
VEGFA-219ENST00000518824 APCSP02743 223 aa8.67□□□□□ -1.02
VEGFA-219ENST00000518824 PRSS1P07477 247 aa8.67□□□□□ -1.02
VEGFA-219ENST00000518824 ESDP10768 282 aa8.67□□□□□ -1.02
VEGFA-219ENST00000518824 FGF6P10767 208 aa8.66□□□□□ -1.02
VEGFA-219ENST00000518824 RNASEKQ6P5S7 137 aaKnown RBP8.66□□□□□ -1.02
VEGFA-219ENST00000518824 ABCA13Q86UQ4 5058 aa8.65□□□□□ -1.02
VEGFA-219ENST00000518824 ADCYAP1P18509 176 aa8.65□□□□□ -1.02
VEGFA-219ENST00000518824 Q6ZSA8 131 aa8.65□□□□□ -1.02
VEGFA-219ENST00000518824 FAT1Q14517 4588 aa8.64□□□□□ -1.03
VEGFA-219ENST00000518824 TRBV27A0A0K0K1C4 114 aa8.64□□□□□ -1.03
VEGFA-219ENST00000518824 PCLOQ9Y6V0 5065 aa8.64□□□□□ -1.03
VEGFA-219ENST00000518824 SUMO2P61956 95 aaKnown RBP8.63□□□□□ -1.03
VEGFA-219ENST00000518824 HBBP68871 147 aa8.63□□□□□ -1.03
VEGFA-219ENST00000518824 AMMECR1LQ6DCA0 310 aa8.63□□□□□ -1.03
VEGFA-219ENST00000518824 TRAV8-4A0A0B4J246 113 aa8.62□□□□□ -1.03
VEGFA-219ENST00000518824 GAGE12HA6NDE8 117 aa8.62□□□□□ -1.03
VEGFA-219ENST00000518824 D6R8Y8 96 aa8.62□□□□□ -1.03
VEGFA-219ENST00000518824 H7C423 109 aa8.62□□□□□ -1.03
VEGFA-219ENST00000518824 NPYP01303 97 aa8.62□□□□□ -1.03
VEGFA-219ENST00000518824 SLPIP03973 132 aa8.62□□□□□ -1.03
VEGFA-219ENST00000518824 Q5VSD8 79 aa8.62□□□□□ -1.03
VEGFA-219ENST00000518824 A0A1B0GW15 77 aa8.61□□□□□ -1.03
VEGFA-219ENST00000518824 EPM2AB3EWF7 344 aa8.61□□□□□ -1.03
VEGFA-219ENST00000518824 VCYO14598 125 aa8.61□□□□□ -1.03
VEGFA-219ENST00000518824 TNFRSF6BO95407 300 aa8.61□□□□□ -1.03
VEGFA-219ENST00000518824 CKS2P33552 79 aa8.61□□□□□ -1.03
VEGFA-219ENST00000518824 PNRC1Q12796 327 aaPredicted RBP8.61□□□□□ -1.03
VEGFA-219ENST00000518824 C7orf77A4D0Y5 90 aa8.6□□□□□ -1.03
VEGFA-219ENST00000518824 PPP1R2P9O14990 202 aa8.6□□□□□ -1.03
VEGFA-219ENST00000518824 C14orf177Q52M58 125 aa8.6□□□□□ -1.03
VEGFA-219ENST00000518824 RNASE13Q5GAN3 156 aaKnown RBP8.6□□□□□ -1.03
VEGFA-219ENST00000518824 SCXQ7RTU7 201 aa8.6□□□□□ -1.03
VEGFA-219ENST00000518824 C15orf56Q8N910 161 aa8.6□□□□□ -1.03
VEGFA-219ENST00000518824 CHCHD10Q8WYQ3 142 aaPredicted RBP8.6□□□□□ -1.03
VEGFA-219ENST00000518824 TRBV24-1A0A075B6N3 115 aa8.59□□□□□ -1.03
VEGFA-219ENST00000518824 TMEM218A2RU14 115 aa8.59□□□□□ -1.03
VEGFA-219ENST00000518824 LINC00862A6NCI5 91 aa8.59□□□□□ -1.03
VEGFA-219ENST00000518824 PANO1I0J062 215 aa8.59□□□□□ -1.03
VEGFA-219ENST00000518824 MRPL52Q86TS9 123 aaKnown RBP8.59□□□□□ -1.03
VEGFA-219ENST00000518824 OR5A1Q8NGJ0 315 aa8.59□□□□□ -1.03
VEGFA-219ENST00000518824 ANAPC16Q96DE5 110 aa8.59□□□□□ -1.03
VEGFA-219ENST00000518824 CDC42SE2Q9NRR3 84 aa8.59□□□□□ -1.03
VEGFA-219ENST00000518824 VPS13BQ7Z7G8 4022 aa8.59□□□□□ -1.03
VEGFA-219ENST00000518824 LINC00959A0A1B0GUT2 108 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 188.5 ms