RNA–Protein interactions for RNA: ENST00000518678.1

TRAM1-202, Transcript of translocation associated membrane protein 1, humanhuman

TSL 4

Gene TRAM1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-202ENST00000518678 Q9H8V8 135 aa12.11□□□□□ -0.47
TRAM1-202ENST00000518678 TRAPPC1Q9Y5R8 145 aa12.11□□□□□ -0.47
TRAM1-202ENST00000518678 DNAH2Q9P225 4427 aa12.11□□□□□ -0.47
TRAM1-202ENST00000518678 IQCJQ1A5X6 159 aa12.1□□□□□ -0.47
TRAM1-202ENST00000518678 TRBV25-1A0A075B6N4 114 aa12.09□□□□□ -0.47
TRAM1-202ENST00000518678 IGHV1-24A0A0C4DH33 117 aa12.09□□□□□ -0.47
TRAM1-202ENST00000518678 COLCA2A8K830 154 aa12.09□□□□□ -0.47
TRAM1-202ENST00000518678 PRSS47A8MTI9 375 aa12.09□□□□□ -0.47
TRAM1-202ENST00000518678 DEFB104AQ8WTQ1 72 aa12.09□□□□□ -0.47
TRAM1-202ENST00000518678 SMIM2Q9BVW6 85 aa12.09□□□□□ -0.47
TRAM1-202ENST00000518678 TSHBP01222 138 aa12.08□□□□□ -0.48
TRAM1-202ENST00000518678 DNAH10OSP0CZ25 163 aa12.08□□□□□ -0.48
TRAM1-202ENST00000518678 ALKBH7Q9BT30 221 aaPredicted RBP12.08□□□□□ -0.48
TRAM1-202ENST00000518678 MAP1LC3AQ9H492 121 aa12.08□□□□□ -0.48
TRAM1-202ENST00000518678 IGLV2-18A0A075B6J9 118 aa12.07□□□□□ -0.48
TRAM1-202ENST00000518678 AMTP48728 403 aa12.07□□□□□ -0.48
TRAM1-202ENST00000518678 KIR2DL4Q99706 377 aa12.07□□□□□ -0.48
TRAM1-202ENST00000518678 LINC01556Q5JQF7 62 aa12.06□□□□□ -0.48
TRAM1-202ENST00000518678 NIT1Q86X76 327 aa12.06□□□□□ -0.48
TRAM1-202ENST00000518678 CHCHD5Q9BSY4 110 aa12.06□□□□□ -0.48
TRAM1-202ENST00000518678 TMEM243Q9BU79 118 aa12.06□□□□□ -0.48
TRAM1-202ENST00000518678 NBDYA0A0U1RRE5 68 aa12.05□□□□□ -0.48
TRAM1-202ENST00000518678 LOC389332A0A1B0GUA5 103 aa12.04□□□□□ -0.48
TRAM1-202ENST00000518678 TCAPO15273 167 aa12.04□□□□□ -0.48
TRAM1-202ENST00000518678 RAB5AP20339 215 aa12.04□□□□□ -0.48
TRAM1-202ENST00000518678 FCER1GP30273 86 aa12.04□□□□□ -0.48
TRAM1-202ENST00000518678 PKIAP61925 76 aa12.04□□□□□ -0.48
TRAM1-202ENST00000518678 CHCHD7Q9BUK0 85 aa12.04□□□□□ -0.48
TRAM1-202ENST00000518678 DNAH17Q9UFH2 4485 aa12.03□□□□□ -0.48
TRAM1-202ENST00000518678 HECTD4Q9Y4D8 3996 aa12.03□□□□□ -0.48
TRAM1-202ENST00000518678 ESDP10768 282 aa12.03□□□□□ -0.48
TRAM1-202ENST00000518678 TTC32Q5I0X7 151 aa12.03□□□□□ -0.48
TRAM1-202ENST00000518678 Q6ZR54 194 aa12.03□□□□□ -0.48
TRAM1-202ENST00000518678 Q8N8P6 123 aa12.03□□□□□ -0.48
TRAM1-202ENST00000518678 FAT2Q9NYQ8 4349 aa12.02□□□□□ -0.48
TRAM1-202ENST00000518678 TRAV9-2A0A087WT02 112 aa12.02□□□□□ -0.49
TRAM1-202ENST00000518678 TMEM262E9PQX1 116 aa12.02□□□□□ -0.49
TRAM1-202ENST00000518678 K7EP13 123 aa12.02□□□□□ -0.49
TRAM1-202ENST00000518678 IGHV3-30P01768 117 aa12.02□□□□□ -0.49
TRAM1-202ENST00000518678 IGHV3-33P01772 117 aa12.02□□□□□ -0.49
TRAM1-202ENST00000518678 IGHV3-30-3P0DP02 117 aa12.02□□□□□ -0.49
TRAM1-202ENST00000518678 IGHV3-30-5P0DP03 117 aa12.02□□□□□ -0.49
TRAM1-202ENST00000518678 GAGE6Q13070 117 aa12.02□□□□□ -0.49
TRAM1-202ENST00000518678 Q8N3U1 123 aa12.02□□□□□ -0.49
TRAM1-202ENST00000518678 A0A087WX48 190 aa12.01□□□□□ -0.49
TRAM1-202ENST00000518678 H7C423 109 aa12.01□□□□□ -0.49
TRAM1-202ENST00000518678 M0R2N4 97 aa12.01□□□□□ -0.49
TRAM1-202ENST00000518678 UBE2L6O14933 153 aa12.01□□□□□ -0.49
TRAM1-202ENST00000518678 KRTAP1-5Q9BYS1 174 aa12.01□□□□□ -0.49
TRAM1-202ENST00000518678 NXT2Q9NPJ8 142 aaKnown RBP12.01□□□□□ -0.49
TRAM1-202ENST00000518678 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12□□□□□ -0.49
TRAM1-202ENST00000518678 IGKV2-29A2NJV5 120 aaPredicted RBP12□□□□□ -0.49
TRAM1-202ENST00000518678 TRGC2P03986 189 aa12□□□□□ -0.49
TRAM1-202ENST00000518678 IFI27P40305 119 aaPredicted RBP12□□□□□ -0.49
TRAM1-202ENST00000518678 MPV17L2Q567V2 206 aa12□□□□□ -0.49
TRAM1-202ENST00000518678 C10orf126Q8N4M7 172 aa12□□□□□ -0.49
TRAM1-202ENST00000518678 K7EMI3 77 aa11.98□□□□□ -0.49
TRAM1-202ENST00000518678 RBX1P62877 108 aa11.98□□□□□ -0.49
TRAM1-202ENST00000518678 PRSS3P2Q8NHM4 247 aa11.98□□□□□ -0.49
TRAM1-202ENST00000518678 C18orf32Q8TCD1 76 aa11.98□□□□□ -0.49
TRAM1-202ENST00000518678 A0A1B0GUV1 79 aa11.97□□□□□ -0.49
TRAM1-202ENST00000518678 IBA57-AS1B1ANH7 110 aa11.97□□□□□ -0.49
TRAM1-202ENST00000518678 Q8N976 141 aa11.97□□□□□ -0.49
TRAM1-202ENST00000518678 C20orf203Q8NBC4 194 aa11.97□□□□□ -0.49
TRAM1-202ENST00000518678 HERC2O95714 4834 aa11.96□□□□□ -0.49
TRAM1-202ENST00000518678 LINC01546A6NGU7 62 aa11.96□□□□□ -0.49
TRAM1-202ENST00000518678 FGF6P10767 208 aa11.96□□□□□ -0.49
TRAM1-202ENST00000518678 LAGE3Q14657 143 aa11.96□□□□□ -0.49
TRAM1-202ENST00000518678 ORMDL2Q53FV1 153 aa11.96□□□□□ -0.49
TRAM1-202ENST00000518678 AMMECR1LQ6DCA0 310 aa11.96□□□□□ -0.49
TRAM1-202ENST00000518678 TMEM18Q96B42 140 aa11.96□□□□□ -0.49
TRAM1-202ENST00000518678 BTF3P20290 206 aaKnown RBP11.95□□□□□ -0.5
TRAM1-202ENST00000518678 MRPL52Q86TS9 123 aaKnown RBP11.95□□□□□ -0.5
TRAM1-202ENST00000518678 KLK12Q9UKR0 248 aa11.95□□□□□ -0.5
TRAM1-202ENST00000518678 IGLV4-60A0A075B6I1 120 aa11.94□□□□□ -0.5
TRAM1-202ENST00000518678 ANGP03950 147 aaKnown RBP11.94□□□□□ -0.5
TRAM1-202ENST00000518678 ZNF25P17030 456 aaPredicted RBP11.94□□□□□ -0.5
TRAM1-202ENST00000518678 RNASEKQ6P5S7 137 aaKnown RBP11.94□□□□□ -0.5
TRAM1-202ENST00000518678 FA2HQ7L5A8 372 aa11.94□□□□□ -0.5
TRAM1-202ENST00000518678 RPL39P62891 51 aaKnown RBP11.93□□□□□ -0.5
TRAM1-202ENST00000518678 SMAGPQ0VAQ4 97 aa11.93□□□□□ -0.5
TRAM1-202ENST00000518678 TIMM21Q9BVV7 248 aa11.93□□□□□ -0.5
TRAM1-202ENST00000518678 UBE2D4Q9Y2X8 147 aa11.93□□□□□ -0.5
TRAM1-202ENST00000518678 RAB5BP61020 215 aa11.92□□□□□ -0.5
TRAM1-202ENST00000518678 C1orf134Q5TEV5 83 aa11.92□□□□□ -0.5
TRAM1-202ENST00000518678 C6orf223Q8N319 242 aa11.92□□□□□ -0.5
TRAM1-202ENST00000518678 URB1-AS1Q96HZ7 61 aa11.92□□□□□ -0.5
TRAM1-202ENST00000518678 TMEM101Q96IK0 257 aa11.92□□□□□ -0.5
TRAM1-202ENST00000518678 PKD1P98161 4303 aa11.91□□□□□ -0.5
TRAM1-202ENST00000518678 DYNC1H1Q14204 4646 aaKnown RBP11.91□□□□□ -0.5
TRAM1-202ENST00000518678 OR5A1Q8NGJ0 315 aa11.91□□□□□ -0.5
TRAM1-202ENST00000518678 PRR34Q9NV39 138 aa11.91□□□□□ -0.5
TRAM1-202ENST00000518678 CSDC2Q9Y534 153 aaKnown RBP11.91□□□□□ -0.5
TRAM1-202ENST00000518678 KIAA1109Q2LD37 5005 aa11.91□□□□□ -0.5
TRAM1-202ENST00000518678 TRAV8-3A0A0A6YYJ7 113 aa11.9□□□□□ -0.5
TRAM1-202ENST00000518678 LINC00614P0C842 121 aa11.9□□□□□ -0.5
TRAM1-202ENST00000518678 G0S2P27469 103 aa11.9□□□□□ -0.5
TRAM1-202ENST00000518678 Q0VG73 95 aa11.9□□□□□ -0.5
TRAM1-202ENST00000518678 ENHOQ6UWT2 76 aa11.9□□□□□ -0.5
TRAM1-202ENST00000518678 C2orf66Q6UXQ4 117 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms