RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 Q8N976 141 aa14.69□□□□□ -0.06
VEGFA-217ENST00000518538 UBE2WQ96B02 151 aa14.69□□□□□ -0.06
VEGFA-217ENST00000518538 TMEM70Q9BUB7 260 aa14.69□□□□□ -0.06
VEGFA-217ENST00000518538 A0A087WTM6 91 aa14.68□□□□□ -0.06
VEGFA-217ENST00000518538 I3L3M4 83 aa14.68□□□□□ -0.06
VEGFA-217ENST00000518538 EREGO14944 169 aa14.68□□□□□ -0.06
VEGFA-217ENST00000518538 ANGP03950 147 aaKnown RBP14.68□□□□□ -0.06
VEGFA-217ENST00000518538 Q0VG73 95 aa14.68□□□□□ -0.06
VEGFA-217ENST00000518538 C10orf91Q5T1B1 145 aa14.68□□□□□ -0.06
VEGFA-217ENST00000518538 RMI2Q96E14 147 aa14.68□□□□□ -0.06
VEGFA-217ENST00000518538 CTDSP1Q9GZU7 261 aa14.68□□□□□ -0.06
VEGFA-217ENST00000518538 PMCHP20382 165 aa14.67□□□□□ -0.06
VEGFA-217ENST00000518538 POLR2KP53803 58 aaKnown RBP14.67□□□□□ -0.06
VEGFA-217ENST00000518538 SPATA12Q7Z6I5 190 aa14.67□□□□□ -0.06
VEGFA-217ENST00000518538 NRACQ8N912 160 aa14.67□□□□□ -0.06
VEGFA-217ENST00000518538 IMMP2LQ96T52 175 aa14.67□□□□□ -0.06
VEGFA-217ENST00000518538 UBE2L6O14933 153 aa14.66□□□□□ -0.06
VEGFA-217ENST00000518538 APCSP02743 223 aa14.66□□□□□ -0.06
VEGFA-217ENST00000518538 CARHSP1Q9Y2V2 147 aaKnown RBP14.66□□□□□ -0.06
VEGFA-217ENST00000518538 COX11Q9Y6N1 276 aa14.66□□□□□ -0.06
VEGFA-217ENST00000518538 TRBV27A0A0K0K1C4 114 aa14.65□□□□□ -0.06
VEGFA-217ENST00000518538 A0A1B0GUV1 79 aa14.65□□□□□ -0.06
VEGFA-217ENST00000518538 CRPP02741 224 aa14.65□□□□□ -0.06
VEGFA-217ENST00000518538 CKS2P33552 79 aa14.65□□□□□ -0.06
VEGFA-217ENST00000518538 ENHOQ6UWT2 76 aa14.65□□□□□ -0.06
VEGFA-217ENST00000518538 BTF3L4Q96K17 158 aa14.65□□□□□ -0.06
VEGFA-217ENST00000518538 PKD1P98161 4303 aa14.65□□□□□ -0.06
VEGFA-217ENST00000518538 LRCOL1A6NCL2 159 aa14.64□□□□□ -0.07
VEGFA-217ENST00000518538 KRTAP10-2P60368 255 aa14.64□□□□□ -0.07
VEGFA-217ENST00000518538 SUMO2P61956 95 aaKnown RBP14.64□□□□□ -0.07
VEGFA-217ENST00000518538 IGKV2D-24A0A075B6R9 120 aa14.63□□□□□ -0.07
VEGFA-217ENST00000518538 TSHBP01222 138 aa14.63□□□□□ -0.07
VEGFA-217ENST00000518538 PRR34Q9NV39 138 aa14.63□□□□□ -0.07
VEGFA-217ENST00000518538 TMEM242Q9NWH2 141 aa14.63□□□□□ -0.07
VEGFA-217ENST00000518538 TRBV24-1A0A075B6N3 115 aa14.62□□□□□ -0.07
VEGFA-217ENST00000518538 C16orf90A8MZG2 172 aa14.62□□□□□ -0.07
VEGFA-217ENST00000518538 D6R8Y8 96 aa14.62□□□□□ -0.07
VEGFA-217ENST00000518538 H7C423 109 aa14.62□□□□□ -0.07
VEGFA-217ENST00000518538 VCYO14598 125 aa14.62□□□□□ -0.07
VEGFA-217ENST00000518538 PPBPP02775 128 aa14.62□□□□□ -0.07
VEGFA-217ENST00000518538 LINC00269Q8N2A0 174 aa14.62□□□□□ -0.07
VEGFA-217ENST00000518538 C20orf203Q8NBC4 194 aa14.62□□□□□ -0.07
VEGFA-217ENST00000518538 IGLV4-60A0A075B6I1 120 aa14.61□□□□□ -0.07
VEGFA-217ENST00000518538 MIAQ16674 131 aa14.61□□□□□ -0.07
VEGFA-217ENST00000518538 C20orf78Q9BR46 151 aa14.61□□□□□ -0.07
VEGFA-217ENST00000518538 TNFRSF6BO95407 300 aa14.6□□□□□ -0.07
VEGFA-217ENST00000518538 C1orf43Q9BWL3 253 aa14.6□□□□□ -0.07
VEGFA-217ENST00000518538 PGPEP1Q9NXJ5 209 aa14.6□□□□□ -0.07
VEGFA-217ENST00000518538 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.59□□□□□ -0.07
VEGFA-217ENST00000518538 TRAV9-1A0A075B6T8 112 aa14.59□□□□□ -0.07
VEGFA-217ENST00000518538 IGKV2-29A2NJV5 120 aaPredicted RBP14.59□□□□□ -0.07
VEGFA-217ENST00000518538 C7orf77A4D0Y5 90 aa14.59□□□□□ -0.07
VEGFA-217ENST00000518538 PHOX2AO14813 284 aa14.59□□□□□ -0.07
VEGFA-217ENST00000518538 ESDP10768 282 aa14.59□□□□□ -0.07
VEGFA-217ENST00000518538 RPL32P62910 135 aaKnown RBP14.59□□□□□ -0.07
VEGFA-217ENST00000518538 RHEBQ15382 184 aa14.59□□□□□ -0.07
VEGFA-217ENST00000518538 CLPSL2Q6UWE3 100 aa14.59□□□□□ -0.07
VEGFA-217ENST00000518538 MAPKAPK5-AS1Q8N8E1 139 aa14.59□□□□□ -0.07
VEGFA-217ENST00000518538 CLRN3Q8NCR9 226 aa14.59□□□□□ -0.07
VEGFA-217ENST00000518538 REG3AQ06141 175 aa14.58□□□□□ -0.08
VEGFA-217ENST00000518538 AMMECR1LQ6DCA0 310 aa14.58□□□□□ -0.08
VEGFA-217ENST00000518538 CDPF1Q6NVV7 123 aa14.58□□□□□ -0.08
VEGFA-217ENST00000518538 ORMDL3Q8N138 153 aa14.58□□□□□ -0.08
VEGFA-217ENST00000518538 KIR2DL4Q99706 377 aa14.58□□□□□ -0.08
VEGFA-217ENST00000518538 NPYP01303 97 aa14.57□□□□□ -0.08
VEGFA-217ENST00000518538 S100PP25815 95 aa14.57□□□□□ -0.08
VEGFA-217ENST00000518538 FCER1GP30273 86 aa14.57□□□□□ -0.08
VEGFA-217ENST00000518538 DNAH11Q96DT5 4516 aa14.56□□□□□ -0.08
VEGFA-217ENST00000518538 PKHD1P08F94 4074 aa14.56□□□□□ -0.08
VEGFA-217ENST00000518538 FGF6P10767 208 aa14.56□□□□□ -0.08
VEGFA-217ENST00000518538 RNASEKQ6P5S7 137 aaKnown RBP14.56□□□□□ -0.08
VEGFA-217ENST00000518538 TMEM136Q6ZRR5 245 aa14.56□□□□□ -0.08
VEGFA-217ENST00000518538 Q8N814 137 aa14.56□□□□□ -0.08
VEGFA-217ENST00000518538 ZNF25P17030 456 aaPredicted RBP14.55□□□□□ -0.08
VEGFA-217ENST00000518538 WFDC2Q14508 124 aa14.55□□□□□ -0.08
VEGFA-217ENST00000518538 BAALCQ8WXS3 180 aa14.55□□□□□ -0.08
VEGFA-217ENST00000518538 PRELID3AQ96N28 172 aa14.55□□□□□ -0.08
VEGFA-217ENST00000518538 SMIM2Q9BVW6 85 aa14.55□□□□□ -0.08
VEGFA-217ENST00000518538 RPS10P5Q9NQ39 176 aa14.55□□□□□ -0.08
VEGFA-217ENST00000518538 NDUFA5Q16718 116 aa14.54□□□□□ -0.08
VEGFA-217ENST00000518538 TRAV8-4A0A0B4J246 113 aa14.53□□□□□ -0.08
VEGFA-217ENST00000518538 LECT2O14960 151 aa14.53□□□□□ -0.08
VEGFA-217ENST00000518538 TCAPO15273 167 aa14.53□□□□□ -0.08
VEGFA-217ENST00000518538 FUSP35637 526 aaKnown RBP eCLIP14.53□□□□□ -0.085e-16■□□□□ 9.4
VEGFA-217ENST00000518538 NTN5Q8WTR8 489 aaPredicted RBP14.53□□□□□ -0.08
VEGFA-217ENST00000518538 LAMTOR2Q9Y2Q5 125 aa14.53□□□□□ -0.08
VEGFA-217ENST00000518538 APOC3P02656 99 aa14.52□□□□□ -0.09
VEGFA-217ENST00000518538 MRPL52Q86TS9 123 aaKnown RBP14.52□□□□□ -0.09
VEGFA-217ENST00000518538 DYNC1H1Q14204 4646 aaKnown RBP14.51□□□□□ -0.09
VEGFA-217ENST00000518538 KRTAP26-1Q6PEX3 210 aa14.51□□□□□ -0.09
VEGFA-217ENST00000518538 SVBPQ8N300 66 aa14.51□□□□□ -0.09
VEGFA-217ENST00000518538 TMEM101Q96IK0 257 aa14.51□□□□□ -0.09
VEGFA-217ENST00000518538 SNAPINO95295 136 aa14.5□□□□□ -0.09
VEGFA-217ENST00000518538 HLA-DQA1P01909 254 aa14.5□□□□□ -0.09
VEGFA-217ENST00000518538 OR5A1Q8NGJ0 315 aa14.5□□□□□ -0.09
VEGFA-217ENST00000518538 IGLV10-54A0A075B6I4 117 aa14.49□□□□□ -0.09
VEGFA-217ENST00000518538 PRSS47A8MTI9 375 aa14.49□□□□□ -0.09
VEGFA-217ENST00000518538 IGLV5-52A0A0A0MRZ9 124 aa14.48□□□□□ -0.09
VEGFA-217ENST00000518538 SMAGPQ0VAQ4 97 aa14.48□□□□□ -0.09
VEGFA-217ENST00000518538 TMEM18Q96B42 140 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 419.6 ms