RNA–Protein interactions for RNA: ENST00000518271.1

MRPS28-202, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-202ENST00000518271 C9JQL5 133 aa7.97□□□□□ -1.13
MRPS28-202ENST00000518271 CRPP02741 224 aa7.97□□□□□ -1.13
MRPS28-202ENST00000518271 MIAQ16674 131 aa7.97□□□□□ -1.13
MRPS28-202ENST00000518271 LINC00269Q8N2A0 174 aa7.97□□□□□ -1.13
MRPS28-202ENST00000518271 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.97□□□□□ -1.13
MRPS28-202ENST00000518271 RPL39LQ96EH5 51 aaKnown RBP7.97□□□□□ -1.13
MRPS28-202ENST00000518271 EIF5A2Q9GZV4 153 aaKnown RBP7.97□□□□□ -1.13
MRPS28-202ENST00000518271 A8MWL6 223 aa7.96□□□□□ -1.14
MRPS28-202ENST00000518271 GAS8-AS1O95177 125 aa7.96□□□□□ -1.14
MRPS28-202ENST00000518271 TMEM243Q9BU79 118 aa7.96□□□□□ -1.14
MRPS28-202ENST00000518271 FAT3Q8TDW7 4589 aa7.95□□□□□ -1.14
MRPS28-202ENST00000518271 ZNF727A8MUV8 499 aa7.95□□□□□ -1.14
MRPS28-202ENST00000518271 USP17L23D6RBM5 183 aa7.95□□□□□ -1.14
MRPS28-202ENST00000518271 HLA-DQA1P01909 254 aa7.95□□□□□ -1.14
MRPS28-202ENST00000518271 SRSF3P84103 164 aaKnown RBP7.95□□□□□ -1.14
MRPS28-202ENST00000518271 FRZBQ92765 325 aa7.95□□□□□ -1.14
MRPS28-202ENST00000518271 OSTCQ9NRP0 149 aa7.95□□□□□ -1.14
MRPS28-202ENST00000518271 LRP1Q07954 4544 aaKnown RBP7.95□□□□□ -1.14
MRPS28-202ENST00000518271 A0A1B0GUV1 79 aa7.94□□□□□ -1.14
MRPS28-202ENST00000518271 HIGD1CA8MV81 97 aa7.94□□□□□ -1.14
MRPS28-202ENST00000518271 TSKUQ8WUA8 353 aa7.94□□□□□ -1.14
MRPS28-202ENST00000518271 ISOC2Q96AB3 205 aa7.94□□□□□ -1.14
MRPS28-202ENST00000518271 V9GYV3 84 aa7.94□□□□□ -1.14
MRPS28-202ENST00000518271 PRSS1P07477 247 aa7.93□□□□□ -1.14
MRPS28-202ENST00000518271 AMTP48728 403 aa7.93□□□□□ -1.14
MRPS28-202ENST00000518271 RPL23P62829 140 aaKnown RBP7.93□□□□□ -1.14
MRPS28-202ENST00000518271 REG3AQ06141 175 aa7.93□□□□□ -1.14
MRPS28-202ENST00000518271 COTL1Q14019 142 aa7.93□□□□□ -1.14
MRPS28-202ENST00000518271 TEX261Q6UWH6 196 aa7.93□□□□□ -1.14
MRPS28-202ENST00000518271 SCXQ7RTU7 201 aa7.93□□□□□ -1.14
MRPS28-202ENST00000518271 RNF185Q96GF1 192 aa7.93□□□□□ -1.14
MRPS28-202ENST00000518271 IGLV10-54A0A075B6I4 117 aa7.92□□□□□ -1.14
MRPS28-202ENST00000518271 TRBV6-5A0A0K0K1A5 114 aa7.92□□□□□ -1.14
MRPS28-202ENST00000518271 A0A1B0GUT8 65 aa7.92□□□□□ -1.14
MRPS28-202ENST00000518271 FAM231BA6NCW3 169 aa7.92□□□□□ -1.14
MRPS28-202ENST00000518271 TMEM191AQ9H0A3 160 aa7.92□□□□□ -1.14
MRPS28-202ENST00000518271 SDHAF1A6NFY7 115 aa7.91□□□□□ -1.14
MRPS28-202ENST00000518271 INAFM2P0DMQ5 153 aa7.91□□□□□ -1.14
MRPS28-202ENST00000518271 RPS10P46783 165 aaKnown RBP7.91□□□□□ -1.14
MRPS28-202ENST00000518271 C14orf177Q52M58 125 aa7.91□□□□□ -1.14
MRPS28-202ENST00000518271 NUP35Q8NFH5 326 aa7.91□□□□□ -1.14
MRPS28-202ENST00000518271 NCR2O95944 276 aa7.9□□□□□ -1.14
MRPS28-202ENST00000518271 KRTAP10-4P60372 401 aaPredicted RBP7.9□□□□□ -1.14
MRPS28-202ENST00000518271 SMIM15Q7Z3B0 74 aa7.9□□□□□ -1.14
MRPS28-202ENST00000518271 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.89□□□□□ -1.15
MRPS28-202ENST00000518271 TRAV8-4A0A0B4J246 113 aa7.89□□□□□ -1.15
MRPS28-202ENST00000518271 IGKV2-29A2NJV5 120 aaPredicted RBP7.89□□□□□ -1.15
MRPS28-202ENST00000518271 TSHBP01222 138 aa7.89□□□□□ -1.15
MRPS28-202ENST00000518271 APCSP02743 223 aa7.89□□□□□ -1.15
MRPS28-202ENST00000518271 RAB4AP20338 218 aa7.89□□□□□ -1.15
MRPS28-202ENST00000518271 TMEM241Q24JQ0 296 aa7.89□□□□□ -1.15
MRPS28-202ENST00000518271 FAM74A3Q4VXF1 159 aa7.89□□□□□ -1.15
MRPS28-202ENST00000518271 AMN1Q8IY45 258 aa7.89□□□□□ -1.15
MRPS28-202ENST00000518271 LINC00528Q8N1L1 170 aa7.89□□□□□ -1.15
MRPS28-202ENST00000518271 CHAC1Q9BUX1 264 aa7.89□□□□□ -1.15
MRPS28-202ENST00000518271 SMKR1H3BMG3 65 aa7.88□□□□□ -1.15
MRPS28-202ENST00000518271 FAM229AH3BQW9 127 aa7.88□□□□□ -1.15
MRPS28-202ENST00000518271 UBE2L6O14933 153 aa7.88□□□□□ -1.15
MRPS28-202ENST00000518271 SLPIP03973 132 aa7.88□□□□□ -1.15
MRPS28-202ENST00000518271 ESDP10768 282 aa7.88□□□□□ -1.15
MRPS28-202ENST00000518271 POLR2KP53803 58 aaKnown RBP7.88□□□□□ -1.15
MRPS28-202ENST00000518271 ADIRFQ15847 76 aa7.88□□□□□ -1.15
MRPS28-202ENST00000518271 C9orf163Q8N9P6 203 aa7.88□□□□□ -1.15
MRPS28-202ENST00000518271 CIRBP-AS1Q8TBR5 109 aa7.88□□□□□ -1.15
MRPS28-202ENST00000518271 BORCS7Q96B45 105 aa7.88□□□□□ -1.15
MRPS28-202ENST00000518271 TMEM242Q9NWH2 141 aa7.88□□□□□ -1.15
MRPS28-202ENST00000518271 NAT8Q9UHE5 227 aa7.88□□□□□ -1.15
MRPS28-202ENST00000518271 SMIM27A0A1W2PRY6 76 aa7.87□□□□□ -1.15
MRPS28-202ENST00000518271 PANO1I0J062 215 aa7.87□□□□□ -1.15
MRPS28-202ENST00000518271 FGF6P10767 208 aa7.87□□□□□ -1.15
MRPS28-202ENST00000518271 C15orf56Q8N910 161 aa7.87□□□□□ -1.15
MRPS28-202ENST00000518271 NRACQ8N912 160 aa7.87□□□□□ -1.15
MRPS28-202ENST00000518271 MRAP2Q96G30 205 aa7.87□□□□□ -1.15
MRPS28-202ENST00000518271 TRBV27A0A0K0K1C4 114 aa7.86□□□□□ -1.15
MRPS28-202ENST00000518271 I3L3M4 83 aa7.86□□□□□ -1.15
MRPS28-202ENST00000518271 CNBPP62633 177 aaKnown RBP7.86□□□□□ -1.15
MRPS28-202ENST00000518271 DGAT2L7PQ6IED9 249 aa7.86□□□□□ -1.15
MRPS28-202ENST00000518271 SMDT1Q9H4I9 107 aa7.86□□□□□ -1.15
MRPS28-202ENST00000518271 ST20Q9HBF5 79 aa7.86□□□□□ -1.15
MRPS28-202ENST00000518271 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.86□□□□□ -1.15
MRPS28-202ENST00000518271 H7C423 109 aa7.85□□□□□ -1.15
MRPS28-202ENST00000518271 RIGQ13278 110 aa7.85□□□□□ -1.15
MRPS28-202ENST00000518271 PEA15Q15121 130 aa7.85□□□□□ -1.15
MRPS28-202ENST00000518271 NAT8BQ9UHF3 227 aa7.85□□□□□ -1.15
MRPS28-202ENST00000518271 IGKV3OR2-268A0A0C4DH90 116 aa7.84□□□□□ -1.15
MRPS28-202ENST00000518271 GAGE12HA6NDE8 117 aa7.84□□□□□ -1.15
MRPS28-202ENST00000518271 PMCHP20382 165 aa7.84□□□□□ -1.15
MRPS28-202ENST00000518271 MRPL51Q4U2R6 128 aaKnown RBP7.84□□□□□ -1.15
MRPS28-202ENST00000518271 FAM104BQ5XKR9 115 aa7.84□□□□□ -1.15
MRPS28-202ENST00000518271 RNASEKQ6P5S7 137 aaKnown RBP7.84□□□□□ -1.15
MRPS28-202ENST00000518271 SDIM1Q6ZPB5 146 aa7.84□□□□□ -1.15
MRPS28-202ENST00000518271 CLRN3Q8NCR9 226 aa7.84□□□□□ -1.15
MRPS28-202ENST00000518271 A0A1B0GXF2 115 aa7.83□□□□□ -1.16
MRPS28-202ENST00000518271 hDV102S1A0JD36 115 aa7.83□□□□□ -1.16
MRPS28-202ENST00000518271 ZNF25P17030 456 aaPredicted RBP7.83□□□□□ -1.16
MRPS28-202ENST00000518271 AMMECR1LQ6DCA0 310 aa7.83□□□□□ -1.16
MRPS28-202ENST00000518271 MRPL52Q86TS9 123 aaKnown RBP7.83□□□□□ -1.16
MRPS28-202ENST00000518271 CHCHD10Q8WYQ3 142 aaPredicted RBP7.83□□□□□ -1.16
MRPS28-202ENST00000518271 FOXI1Q12951 378 aa7.82□□□□□ -1.16
MRPS28-202ENST00000518271 CIRBPQ14011 172 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms