RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 ZNF492Q9P255 531 aa1.94□□□□□ -2.1
SKP1-204ENST00000517691 PYGO1Q9Y3Y4 419 aa1.94□□□□□ -2.1
SKP1-204ENST00000517691 STAB2Q8WWQ8 2551 aa1.94□□□□□ -2.1
SKP1-204ENST00000517691 TRAV9-2A0A087WT02 112 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 TRAV26-2A0A0B4J265 109 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 LOC389332A0A1B0GUA5 103 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 KLLNB2CW77 178 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 C11orf94C9JXX5 98 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 PEX7O00628 323 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 PSPHP1O15172 72 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 NMBP08949 121 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 CRISP2P16562 243 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 ATP5G3P48201 142 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 PSMB2P49721 201 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 LINC01547P58512 204 aaPredicted RBP1.93□□□□□ -2.1
SKP1-204ENST00000517691 DAD1P61803 113 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 UBE2G1P62253 170 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 DAZ2Q13117 558 aaKnown RBP1.93□□□□□ -2.1
SKP1-204ENST00000517691 Q6ZQT7 251 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 Q6ZRU5 148 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 DAZ4Q86SG3 579 aaKnown RBP1.93□□□□□ -2.1
SKP1-204ENST00000517691 ZFAND2AQ8N6M9 145 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 CYB561D1Q8N8Q1 229 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 NKAPP1Q8N9T2 125 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 TMEM75Q8N9X5 138 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 HIST1H2BAQ96A08 127 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 C18orf15Q96N68 181 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 OCR1Q9BZK8 76 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 NOP10Q9NPE3 64 aaKnown RBP1.93□□□□□ -2.1
SKP1-204ENST00000517691 MANBALQ9NQG1 85 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 DAZ3Q9NR90 486 aaKnown RBP1.93□□□□□ -2.1
SKP1-204ENST00000517691 DHRS4-AS1Q9P1J3 65 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 HSPB8Q9UJY1 196 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 CELA1Q9UNI1 258 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 TIMM8BQ9Y5J9 83 aaPredicted RBP1.93□□□□□ -2.1
SKP1-204ENST00000517691 TRAV1-1A0A0B4J248 108 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 TRAV21A0A0B4J279 112 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 IGHV3-16A0A0C4DH30 117 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 IGLL5B9A064 214 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 GNRH2O43555 120 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 ZNF324O75467 553 aaPredicted RBP1.93□□□□□ -2.1
SKP1-204ENST00000517691 RHEBQ15382 184 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 TMEM183BQ1AE95 376 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 CASC10Q5T4H9 136 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 PRR9Q5T870 116 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 CEMP1Q6PRD7 247 aaPredicted RBP1.93□□□□□ -2.1
SKP1-204ENST00000517691 ZNF493Q6ZR52 646 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 Q6ZTC4 211 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 TMEM183AQ8IXX5 376 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 TVP23CQ96ET8 276 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 C16orf74Q96GX8 76 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 PYGO2Q9BRQ0 406 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 TCEAL7Q9BRU2 100 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 MED9Q9NWA0 146 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 TP53TG3Q9ULZ0 132 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 KLK5Q9Y337 293 aaPredicted RBP1.93□□□□□ -2.1
SKP1-204ENST00000517691 LENEPQ9Y5L5 61 aa1.93□□□□□ -2.1
SKP1-204ENST00000517691 ZNF706Q9Y5V0 76 aaPredicted RBP1.93□□□□□ -2.1
SKP1-204ENST00000517691 DNAH7Q8WXX0 4024 aa1.92□□□□□ -2.1
SKP1-204ENST00000517691 TRGV2A0A075B6R0 118 aa1.92□□□□□ -2.1
SKP1-204ENST00000517691 DEFB131BA0A096LNP1 70 aa1.92□□□□□ -2.1
SKP1-204ENST00000517691 TRGV1A0A0A0MS02 117 aa1.92□□□□□ -2.1
SKP1-204ENST00000517691 IGHV6-1A0A0B4J1U7 121 aa1.92□□□□□ -2.1
SKP1-204ENST00000517691 TRAV10A0A0B4J240 114 aa1.92□□□□□ -2.1
SKP1-204ENST00000517691 NUPR2A6NF83 97 aa1.92□□□□□ -2.1
SKP1-204ENST00000517691 FABP5P3A8MUU1 101 aa1.92□□□□□ -2.1
SKP1-204ENST00000517691 IGLV2-11P01706 119 aa1.92□□□□□ -2.1
SKP1-204ENST00000517691 CHTF8P0CG12 524 aa1.92□□□□□ -2.1
SKP1-204ENST00000517691 BCL2P10415 239 aa1.92□□□□□ -2.1
SKP1-204ENST00000517691 ZNF80P51504 273 aaPredicted RBP1.92□□□□□ -2.1
SKP1-204ENST00000517691 C12orf74Q32Q52 190 aa1.92□□□□□ -2.1
SKP1-204ENST00000517691 Q6AWC8 147 aa1.92□□□□□ -2.1
SKP1-204ENST00000517691 TEX261Q6UWH6 196 aa1.92□□□□□ -2.1
SKP1-204ENST00000517691 FA2HQ7L5A8 372 aa1.92□□□□□ -2.1
SKP1-204ENST00000517691 NOTCH2NLQ7Z3S9 236 aa1.92□□□□□ -2.1
SKP1-204ENST00000517691 Q86TA4 180 aa1.92□□□□□ -2.1
SKP1-204ENST00000517691 BAGE2Q86Y30 109 aa1.92□□□□□ -2.1
SKP1-204ENST00000517691 ANKRD29Q8N6D5 301 aa1.92□□□□□ -2.1
SKP1-204ENST00000517691 TMEM263Q8WUH6 116 aaKnown RBP1.92□□□□□ -2.1
SKP1-204ENST00000517691 KCNS1Q96KK3 526 aa1.92□□□□□ -2.1
SKP1-204ENST00000517691 SAMD10Q9BYL1 202 aa1.92□□□□□ -2.1
SKP1-204ENST00000517691 EIF5A2Q9GZV4 153 aaKnown RBP1.92□□□□□ -2.1
SKP1-204ENST00000517691 SDF2L1Q9HCN8 221 aa1.92□□□□□ -2.1
SKP1-204ENST00000517691 MDFICQ9P1T7 246 aa1.92□□□□□ -2.1
SKP1-204ENST00000517691 ZFP30Q9Y2G7 519 aa1.92□□□□□ -2.1
SKP1-204ENST00000517691 ARL2-SNX15V9GYD0 113 aa1.92□□□□□ -2.1
SKP1-204ENST00000517691 IGLV4-3A0A075B6K6 122 aa1.91□□□□□ -2.1
SKP1-204ENST00000517691 TMSB15BA0A087X1C1 80 aa1.91□□□□□ -2.1
SKP1-204ENST00000517691 B4DEV8 164 aa1.91□□□□□ -2.1
SKP1-204ENST00000517691 C9JCJ5 164 aa1.91□□□□□ -2.1
SKP1-204ENST00000517691 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.91□□□□□ -2.1
SKP1-204ENST00000517691 J3KT08 172 aa1.91□□□□□ -2.1
SKP1-204ENST00000517691 SH2D1AO60880 128 aa1.91□□□□□ -2.1
SKP1-204ENST00000517691 MGST1P10620 155 aaKnown RBP1.91□□□□□ -2.1
SKP1-204ENST00000517691 S100A4P26447 101 aaKnown RBP1.91□□□□□ -2.1
SKP1-204ENST00000517691 RPL35P42766 123 aaKnown RBP1.91□□□□□ -2.1
SKP1-204ENST00000517691 GNG4P50150 75 aa1.91□□□□□ -2.1
SKP1-204ENST00000517691 MP68P56378 58 aa1.91□□□□□ -2.1
SKP1-204ENST00000517691 RPL23P62829 140 aaKnown RBP1.91□□□□□ -2.1
SKP1-204ENST00000517691 MEF2BQ02080 365 aaPredicted RBP1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms