RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 COTL1Q14019 142 aa16.19■□□□□ 0.18
PVT1-204ENST00000517525 TRAV26-2A0A0B4J265 109 aa16.18■□□□□ 0.18
PVT1-204ENST00000517525 LECT2O14960 151 aa16.18■□□□□ 0.18
PVT1-204ENST00000517525 RPL23P62829 140 aaKnown RBP16.18■□□□□ 0.18
PVT1-204ENST00000517525 TMEM191AQ9H0A3 160 aa16.18■□□□□ 0.18
PVT1-204ENST00000517525 NAT8Q9UHE5 227 aa16.18■□□□□ 0.18
PVT1-204ENST00000517525 TRBV6-5A0A0K0K1A5 114 aa16.17■□□□□ 0.18
PVT1-204ENST00000517525 NCR2O95944 276 aa16.17■□□□□ 0.18
PVT1-204ENST00000517525 SRSF3P84103 164 aaKnown RBP16.17■□□□□ 0.18
PVT1-204ENST00000517525 C14orf177Q52M58 125 aa16.16■□□□□ 0.18
PVT1-204ENST00000517525 LINC00269Q8N2A0 174 aa16.16■□□□□ 0.18
PVT1-204ENST00000517525 C20orf203Q8NBC4 194 aa16.16■□□□□ 0.18
PVT1-204ENST00000517525 KRTAP26-1Q6PEX3 210 aa16.15■□□□□ 0.18
PVT1-204ENST00000517525 RPL39LQ96EH5 51 aaKnown RBP16.15■□□□□ 0.18
PVT1-204ENST00000517525 AMTP48728 403 aa16.14■□□□□ 0.17
PVT1-204ENST00000517525 Q6ZSA8 131 aa16.14■□□□□ 0.17
PVT1-204ENST00000517525 NUP35Q8NFH5 326 aa16.13■□□□□ 0.17
PVT1-204ENST00000517525 TRAV8-4A0A0B4J246 113 aa16.12■□□□□ 0.17
PVT1-204ENST00000517525 SDHAF1A6NFY7 115 aa16.12■□□□□ 0.17
PVT1-204ENST00000517525 H7C423 109 aa16.12■□□□□ 0.17
PVT1-204ENST00000517525 REG3AQ06141 175 aa16.12■□□□□ 0.17
PVT1-204ENST00000517525 RIGQ13278 110 aa16.12■□□□□ 0.17
PVT1-204ENST00000517525 RNF185Q96GF1 192 aa16.12■□□□□ 0.17
PVT1-204ENST00000517525 NAT8BQ9UHF3 227 aa16.12■□□□□ 0.17
PVT1-204ENST00000517525 DNAH8Q96JB1 4490 aa16.11■□□□□ 0.17
PVT1-204ENST00000517525 IGLV4-60A0A075B6I1 120 aa16.11■□□□□ 0.17
PVT1-204ENST00000517525 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.11■□□□□ 0.17
PVT1-204ENST00000517525 ADIRFQ15847 76 aa16.11■□□□□ 0.17
PVT1-204ENST00000517525 MRAP2Q96G30 205 aa16.11■□□□□ 0.17
PVT1-204ENST00000517525 EPM2AB3EWF7 344 aa16.1■□□□□ 0.17
PVT1-204ENST00000517525 UBE2L6O14933 153 aa16.1■□□□□ 0.17
PVT1-204ENST00000517525 RAB4AP20338 218 aa16.1■□□□□ 0.17
PVT1-204ENST00000517525 FAM30AQ9NZY2 134 aa16.1■□□□□ 0.17
PVT1-204ENST00000517525 SMIM27A0A1W2PRY6 76 aa16.09■□□□□ 0.17
PVT1-204ENST00000517525 I3L3M4 83 aa16.09■□□□□ 0.17
PVT1-204ENST00000517525 USP17L23D6RBM5 183 aa16.07■□□□□ 0.16
PVT1-204ENST00000517525 POLR2KP53803 58 aaKnown RBP16.07■□□□□ 0.16
PVT1-204ENST00000517525 CLPSL2Q6UWE3 100 aa16.07■□□□□ 0.16
PVT1-204ENST00000517525 GAS8-AS1O95177 125 aa16.06■□□□□ 0.16
PVT1-204ENST00000517525 APCSP02743 223 aa16.06■□□□□ 0.16
PVT1-204ENST00000517525 AMN1Q8IY45 258 aa16.06■□□□□ 0.16
PVT1-204ENST00000517525 DEFB104AQ8WTQ1 72 aa16.06■□□□□ 0.16
PVT1-204ENST00000517525 ST20Q9HBF5 79 aa16.06■□□□□ 0.16
PVT1-204ENST00000517525 A0A1B0GW15 77 aa16.05■□□□□ 0.16
PVT1-204ENST00000517525 PPP1R17O96001 155 aa16.05■□□□□ 0.16
PVT1-204ENST00000517525 TRBV27A0A0K0K1C4 114 aa16.04■□□□□ 0.16
PVT1-204ENST00000517525 HLA-DQA1P01909 254 aa16.04■□□□□ 0.16
PVT1-204ENST00000517525 ESDP10768 282 aa16.04■□□□□ 0.16
PVT1-204ENST00000517525 PMCHP20382 165 aa16.04■□□□□ 0.16
PVT1-204ENST00000517525 DGAT2L7PQ6IED9 249 aa16.04■□□□□ 0.16
PVT1-204ENST00000517525 FAT1Q14517 4588 aa16.04■□□□□ 0.16
PVT1-204ENST00000517525 RPS10P46783 165 aaKnown RBP16.03■□□□□ 0.16
PVT1-204ENST00000517525 CLRN3Q8NCR9 226 aa16.03■□□□□ 0.16
PVT1-204ENST00000517525 TSHBP01222 138 aa16.02■□□□□ 0.16
PVT1-204ENST00000517525 PRSS1P07477 247 aa16.02■□□□□ 0.16
PVT1-204ENST00000517525 ZNF25P17030 456 aaPredicted RBP16.02■□□□□ 0.16
PVT1-204ENST00000517525 FAM104BQ5XKR9 115 aa16.02■□□□□ 0.16
PVT1-204ENST00000517525 RAB14P61106 215 aa16.01■□□□□ 0.15
PVT1-204ENST00000517525 Q5VSD8 79 aa16.01■□□□□ 0.15
PVT1-204ENST00000517525 IGLV10-54A0A075B6I4 117 aa16■□□□□ 0.15
PVT1-204ENST00000517525 FGF6P10767 208 aa16■□□□□ 0.15
PVT1-204ENST00000517525 AMMECR1LQ6DCA0 310 aa16■□□□□ 0.15
PVT1-204ENST00000517525 NRACQ8N912 160 aa16■□□□□ 0.15
PVT1-204ENST00000517525 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.99■□□□□ 0.15
PVT1-204ENST00000517525 IGKV2-29A2NJV5 120 aaPredicted RBP15.99■□□□□ 0.15
PVT1-204ENST00000517525 LINC00862A6NCI5 91 aa15.99■□□□□ 0.15
PVT1-204ENST00000517525 SMR3BP02814 79 aaPredicted RBP15.99■□□□□ 0.15
PVT1-204ENST00000517525 LINC01620Q4KN68 170 aa15.99■□□□□ 0.15
PVT1-204ENST00000517525 FAM229AH3BQW9 127 aa15.98■□□□□ 0.15
PVT1-204ENST00000517525 VCYO14598 125 aa15.98■□□□□ 0.15
PVT1-204ENST00000517525 HAMPP81172 84 aa15.98■□□□□ 0.15
PVT1-204ENST00000517525 VPS13BQ7Z7G8 4022 aa15.98■□□□□ 0.15
PVT1-204ENST00000517525 S100A8P05109 93 aa15.97■□□□□ 0.15
PVT1-204ENST00000517525 MRPL51Q4U2R6 128 aaKnown RBP15.97■□□□□ 0.15
PVT1-204ENST00000517525 MRPL52Q86TS9 123 aaKnown RBP15.97■□□□□ 0.15
PVT1-204ENST00000517525 C9orf163Q8N9P6 203 aa15.97■□□□□ 0.15
PVT1-204ENST00000517525 TMEM242Q9NWH2 141 aa15.97■□□□□ 0.15
PVT1-204ENST00000517525 A0A1B0GXF2 115 aa15.96■□□□□ 0.15
PVT1-204ENST00000517525 PPP1R2P9O14990 202 aa15.96■□□□□ 0.15
PVT1-204ENST00000517525 SUMO2P61956 95 aaKnown RBP15.96■□□□□ 0.15
PVT1-204ENST00000517525 RNASEKQ6P5S7 137 aaKnown RBP15.96■□□□□ 0.15
PVT1-204ENST00000517525 TRBV24-1A0A075B6N3 115 aa15.95■□□□□ 0.14
PVT1-204ENST00000517525 SMKR1H3BMG3 65 aa15.95■□□□□ 0.14
PVT1-204ENST00000517525 CAMPP49913 170 aa15.95■□□□□ 0.14
PVT1-204ENST00000517525 CNBPP62633 177 aaKnown RBP15.95■□□□□ 0.14
PVT1-204ENST00000517525 RPL32P62910 135 aaKnown RBP15.95■□□□□ 0.14
PVT1-204ENST00000517525 PNRC1Q12796 327 aaPredicted RBP15.95■□□□□ 0.14
PVT1-204ENST00000517525 CLLU1Q5K131 121 aa15.95■□□□□ 0.14
PVT1-204ENST00000517525 C20orf78Q9BR46 151 aa15.95■□□□□ 0.14
PVT1-204ENST00000517525 CHAC1Q9BUX1 264 aa15.95■□□□□ 0.14
PVT1-204ENST00000517525 HBBP68871 147 aa15.94■□□□□ 0.14
PVT1-204ENST00000517525 OR5A1Q8NGJ0 315 aa15.93■□□□□ 0.14
PVT1-204ENST00000517525 TMEM101Q96IK0 257 aa15.93■□□□□ 0.14
PVT1-204ENST00000517525 BTF3L4Q96K17 158 aa15.93■□□□□ 0.14
PVT1-204ENST00000517525 C7orf77A4D0Y5 90 aa15.92■□□□□ 0.14
PVT1-204ENST00000517525 F8W036 122 aa15.92■□□□□ 0.14
PVT1-204ENST00000517525 INAFM2P0DMQ5 153 aa15.92■□□□□ 0.14
PVT1-204ENST00000517525 SCXQ7RTU7 201 aa15.92■□□□□ 0.14
PVT1-204ENST00000517525 ATP5L2Q7Z4Y8 100 aa15.92■□□□□ 0.14
PVT1-204ENST00000517525 CFAP161Q6P656 301 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms