RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 ELOF1P60002 83 aaKnown RBP2.01□□□□□ -2.09
RNU4-60P-201ENST00000517239 DEFA5Q01523 94 aa2.01□□□□□ -2.09
RNU4-60P-201ENST00000517239 ETDBQ3ZM63 59 aa2.01□□□□□ -2.09
RNU4-60P-201ENST00000517239 LINC00322Q6ZN03 302 aaPredicted RBP2.01□□□□□ -2.09
RNU4-60P-201ENST00000517239 KRTAP1-3Q8IUG1 177 aa2.01□□□□□ -2.09
RNU4-60P-201ENST00000517239 DYNLRB1Q9NP97 96 aa2.01□□□□□ -2.09
RNU4-60P-201ENST00000517239 NDUFA4L2Q9NRX3 87 aa2.01□□□□□ -2.09
RNU4-60P-201ENST00000517239 BTAF1O14981 1849 aa2.01□□□□□ -2.09
RNU4-60P-201ENST00000517239 COL5A1P20908 1838 aaPredicted RBP2.01□□□□□ -2.09
RNU4-60P-201ENST00000517239 SCN11AQ9UI33 1791 aa2□□□□□ -2.09
RNU4-60P-201ENST00000517239 A0A1W2PPM0 123 aa2□□□□□ -2.09
RNU4-60P-201ENST00000517239 H7BZZ5 65 aa2□□□□□ -2.09
RNU4-60P-201ENST00000517239 PPP1R17O96001 155 aa2□□□□□ -2.09
RNU4-60P-201ENST00000517239 CCL3L1P16619 93 aa2□□□□□ -2.09
RNU4-60P-201ENST00000517239 PMCHL1Q16048 86 aa2□□□□□ -2.09
RNU4-60P-201ENST00000517239 SPATA45Q537H7 98 aa2□□□□□ -2.09
RNU4-60P-201ENST00000517239 LCE1DQ5T752 114 aa2□□□□□ -2.09
RNU4-60P-201ENST00000517239 Q6ZRN7 208 aaPredicted RBP2□□□□□ -2.09
RNU4-60P-201ENST00000517239 VMO1Q7Z5L0 202 aa2□□□□□ -2.09
RNU4-60P-201ENST00000517239 BPESC1Q9GZL8 116 aa2□□□□□ -2.09
RNU4-60P-201ENST00000517239 SMCO4Q9NRQ5 59 aa2□□□□□ -2.09
RNU4-60P-201ENST00000517239 LENEPQ9Y5L5 61 aa2□□□□□ -2.09
RNU4-60P-201ENST00000517239 SIPA1L3O60292 1781 aaPredicted RBP2□□□□□ -2.09
RNU4-60P-201ENST00000517239 GBF1Q92538 1859 aa1.99□□□□□ -2.09
RNU4-60P-201ENST00000517239 ABCA8O94911 1581 aa1.99□□□□□ -2.09
RNU4-60P-201ENST00000517239 IGKV2-29A2NJV5 120 aaPredicted RBP1.99□□□□□ -2.09
RNU4-60P-201ENST00000517239 INE1O15225 51 aa1.99□□□□□ -2.09
RNU4-60P-201ENST00000517239 FAM74A4Q5TZK3 123 aa1.99□□□□□ -2.09
RNU4-60P-201ENST00000517239 COX7B2Q8TF08 81 aa1.99□□□□□ -2.09
RNU4-60P-201ENST00000517239 KRTAP9-8Q9BYQ0 159 aa1.99□□□□□ -2.09
RNU4-60P-201ENST00000517239 HIGD1BQ9P298 99 aa1.99□□□□□ -2.09
RNU4-60P-201ENST00000517239 EHBP1L1Q8N3D4 1523 aa1.99□□□□□ -2.09
RNU4-60P-201ENST00000517239 MRC1P22897 1456 aa1.99□□□□□ -2.09
RNU4-60P-201ENST00000517239 DOCK10Q96BY6 2186 aa1.99□□□□□ -2.09
RNU4-60P-201ENST00000517239 BLMP54132 1417 aaPredicted RBP1.99□□□□□ -2.09
RNU4-60P-201ENST00000517239 PTPN23Q9H3S7 1636 aa1.99□□□□□ -2.09
RNU4-60P-201ENST00000517239 MDC1Q14676 2089 aaKnown RBP1.98□□□□□ -2.09
RNU4-60P-201ENST00000517239 CFAP74Q9C0B2 1584 aa1.98□□□□□ -2.09
RNU4-60P-201ENST00000517239 FREM1Q5H8C1 2179 aa1.98□□□□□ -2.09
RNU4-60P-201ENST00000517239 ALPK2Q86TB3 2170 aa1.98□□□□□ -2.09
RNU4-60P-201ENST00000517239 IGKV3D-7A0A0C4DH55 119 aa1.98□□□□□ -2.09
RNU4-60P-201ENST00000517239 IGKV3OR2-268A0A0C4DH90 116 aa1.98□□□□□ -2.09
RNU4-60P-201ENST00000517239 HMGN4O00479 90 aa1.98□□□□□ -2.09
RNU4-60P-201ENST00000517239 SPAG11BQ08648 103 aa1.98□□□□□ -2.09
RNU4-60P-201ENST00000517239 WFDC2Q14508 124 aa1.98□□□□□ -2.09
RNU4-60P-201ENST00000517239 FXYD3Q14802 87 aa1.98□□□□□ -2.09
RNU4-60P-201ENST00000517239 SPAG11AQ6PDA7 123 aa1.98□□□□□ -2.09
RNU4-60P-201ENST00000517239 IQSEC2Q5JU85 1478 aa1.98□□□□□ -2.09
RNU4-60P-201ENST00000517239 NRXN1Q9ULB1 1477 aa1.98□□□□□ -2.09
RNU4-60P-201ENST00000517239 KIAA0100Q14667 2235 aaKnown RBP1.98□□□□□ -2.09
RNU4-60P-201ENST00000517239 FN1P02751 2386 aaKnown RBP1.98□□□□□ -2.09
RNU4-60P-201ENST00000517239 RGPD8O14715 1765 aaPredicted RBP1.98□□□□□ -2.09
RNU4-60P-201ENST00000517239 RGPD5Q99666 1765 aa1.98□□□□□ -2.09
RNU4-60P-201ENST00000517239 UGGT2Q9NYU1 1516 aa1.97□□□□□ -2.09
RNU4-60P-201ENST00000517239 TRGV2A0A075B6R0 118 aa1.97□□□□□ -2.09
RNU4-60P-201ENST00000517239 NBDYA0A0U1RRE5 68 aa1.97□□□□□ -2.09
RNU4-60P-201ENST00000517239 FXYD1O00168 92 aa1.97□□□□□ -2.09
RNU4-60P-201ENST00000517239 NMSQ5H8A3 153 aa1.97□□□□□ -2.09
RNU4-60P-201ENST00000517239 FAM223AQ8IWN6 122 aa1.97□□□□□ -2.09
RNU4-60P-201ENST00000517239 ZNF625Q96I27 306 aaPredicted RBP1.97□□□□□ -2.09
RNU4-60P-201ENST00000517239 CDC42SE2Q9NRR3 84 aa1.97□□□□□ -2.09
RNU4-60P-201ENST00000517239 SNURFQ9Y675 71 aa1.97□□□□□ -2.09
RNU4-60P-201ENST00000517239 V9GYH0 126 aa1.97□□□□□ -2.09
RNU4-60P-201ENST00000517239 ARFGEF3Q5TH69 2177 aa1.97□□□□□ -2.09
RNU4-60P-201ENST00000517239 MED12Q93074 2177 aa1.96□□□□□ -2.1
RNU4-60P-201ENST00000517239 MROH1Q8NDA8 1641 aa1.96□□□□□ -2.1
RNU4-60P-201ENST00000517239 TRBV25-1A0A075B6N4 114 aa1.96□□□□□ -2.1
RNU4-60P-201ENST00000517239 LOC285095A0A1B0GVY8 99 aa1.96□□□□□ -2.1
RNU4-60P-201ENST00000517239 KANTRA0A1W2PQU2 76 aa1.96□□□□□ -2.1
RNU4-60P-201ENST00000517239 TMEM14DPA8MWL7 114 aa1.96□□□□□ -2.1
RNU4-60P-201ENST00000517239 M0R2N4 97 aa1.96□□□□□ -2.1
RNU4-60P-201ENST00000517239 PDCD5O14737 125 aa1.96□□□□□ -2.1
RNU4-60P-201ENST00000517239 HCRTO43612 131 aa1.96□□□□□ -2.1
RNU4-60P-201ENST00000517239 IGLC2P0DOY2 106 aa1.96□□□□□ -2.1
RNU4-60P-201ENST00000517239 IGLC3P0DOY3 106 aa1.96□□□□□ -2.1
RNU4-60P-201ENST00000517239 SMIM11AP58511 58 aa1.96□□□□□ -2.1
RNU4-60P-201ENST00000517239 KLKP1Q107X0 134 aa1.96□□□□□ -2.1
RNU4-60P-201ENST00000517239 TMEM170BQ5T4T1 132 aa1.96□□□□□ -2.1
RNU4-60P-201ENST00000517239 C5orf56Q8N8D9 126 aa1.96□□□□□ -2.1
RNU4-60P-201ENST00000517239 NUP188Q5SRE5 1749 aa1.96□□□□□ -2.1
RNU4-60P-201ENST00000517239 HMGXB3Q12766 1538 aa1.96□□□□□ -2.1
RNU4-60P-201ENST00000517239 TMEM131LA2VDJ0 1609 aa1.95□□□□□ -2.1
RNU4-60P-201ENST00000517239 KNDC1Q76NI1 1749 aa1.95□□□□□ -2.1
RNU4-60P-201ENST00000517239 ADGRB2O60241 1585 aa1.95□□□□□ -2.1
RNU4-60P-201ENST00000517239 ANKARQ7Z5J8 1434 aa1.95□□□□□ -2.1
RNU4-60P-201ENST00000517239 IGKV2-40A0A087WW87 121 aaPredicted RBP1.95□□□□□ -2.1
RNU4-60P-201ENST00000517239 A0A1B0GVY2 172 aa1.95□□□□□ -2.1
RNU4-60P-201ENST00000517239 H3BUT2 72 aa1.95□□□□□ -2.1
RNU4-60P-201ENST00000517239 IGKV2D-40P01614 121 aaPredicted RBP1.95□□□□□ -2.1
RNU4-60P-201ENST00000517239 PI4KAP42356 2102 aa1.95□□□□□ -2.1
RNU4-60P-201ENST00000517239 FXYD4P59646 89 aa1.95□□□□□ -2.1
RNU4-60P-201ENST00000517239 SNRPFP62306 86 aaKnown RBP1.95□□□□□ -2.1
RNU4-60P-201ENST00000517239 PSMG4Q5JS54 123 aa1.95□□□□□ -2.1
RNU4-60P-201ENST00000517239 BVES-AS1Q5T3Y7 98 aa1.95□□□□□ -2.1
RNU4-60P-201ENST00000517239 XAF1Q6GPH4 301 aa1.95□□□□□ -2.1
RNU4-60P-201ENST00000517239 PPP1R1CQ8WVI7 109 aa1.95□□□□□ -2.1
RNU4-60P-201ENST00000517239 ARL2-SNX15V9GYD0 113 aa1.95□□□□□ -2.1
RNU4-60P-201ENST00000517239 V9GYV3 84 aa1.95□□□□□ -2.1
RNU4-60P-201ENST00000517239 E9PCH4 1651 aa1.95□□□□□ -2.1
RNU4-60P-201ENST00000517239 RTTNQ86VV8 2226 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms