RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 A8MTW9 85 aa2.12□□□□□ -2.07
SCARNA13-201ENST00000516672 H3BMM0 161 aa2.12□□□□□ -2.07
SCARNA13-201ENST00000516672 MRPS12O15235 138 aaKnown RBP2.12□□□□□ -2.07
SCARNA13-201ENST00000516672 DUSP14O95147 198 aaKnown RBP2.12□□□□□ -2.07
SCARNA13-201ENST00000516672 LEPROTL1O95214 131 aa2.12□□□□□ -2.07
SCARNA13-201ENST00000516672 LTAP01374 205 aa2.12□□□□□ -2.07
SCARNA13-201ENST00000516672 IGLV2-11P01706 119 aa2.12□□□□□ -2.07
SCARNA13-201ENST00000516672 SMIM17P0DL12 118 aa2.12□□□□□ -2.07
SCARNA13-201ENST00000516672 HIST1H1EP10412 219 aaKnown RBP2.12□□□□□ -2.07
SCARNA13-201ENST00000516672 SCGB1A1P11684 91 aa2.12□□□□□ -2.07
SCARNA13-201ENST00000516672 HLA-DRB4P13762 266 aa2.12□□□□□ -2.07
SCARNA13-201ENST00000516672 EDN2P20800 178 aa2.12□□□□□ -2.07
SCARNA13-201ENST00000516672 FOXA3P55318 350 aaPredicted RBP2.12□□□□□ -2.07
SCARNA13-201ENST00000516672 UBE2L3P68036 154 aaKnown RBP2.12□□□□□ -2.07
SCARNA13-201ENST00000516672 HSD52Q0P140 79 aa2.12□□□□□ -2.07
SCARNA13-201ENST00000516672 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.12□□□□□ -2.07
SCARNA13-201ENST00000516672 FOXI2Q6ZQN5 318 aa2.12□□□□□ -2.07
SCARNA13-201ENST00000516672 Q86TA4 180 aa2.12□□□□□ -2.07
SCARNA13-201ENST00000516672 TRPT1Q86TN4 253 aaKnown RBP2.12□□□□□ -2.07
SCARNA13-201ENST00000516672 STHQ8IWL8 128 aa2.12□□□□□ -2.07
SCARNA13-201ENST00000516672 OR5A1Q8NGJ0 315 aa2.12□□□□□ -2.07
SCARNA13-201ENST00000516672 C16orf92Q96LL3 132 aa2.12□□□□□ -2.07
SCARNA13-201ENST00000516672 ODF3Q96PU9 254 aa2.12□□□□□ -2.07
SCARNA13-201ENST00000516672 NAA38Q9BRA0 125 aaKnown RBP2.12□□□□□ -2.07
SCARNA13-201ENST00000516672 GFRA4Q9GZZ7 299 aa2.12□□□□□ -2.07
SCARNA13-201ENST00000516672 MAP6D1Q9H9H5 199 aa2.12□□□□□ -2.07
SCARNA13-201ENST00000516672 PRO0461Q9UI25 63 aa2.12□□□□□ -2.07
SCARNA13-201ENST00000516672 RPH3ALQ9UNE2 315 aa2.12□□□□□ -2.07
SCARNA13-201ENST00000516672 HLA-DRB4X5D2U9 266 aa2.12□□□□□ -2.07
SCARNA13-201ENST00000516672 IGHV3OR16-13A0A075B7E8 117 aa2.11□□□□□ -2.07
SCARNA13-201ENST00000516672 IGHV3-49A0A0A0MS15 119 aa2.11□□□□□ -2.07
SCARNA13-201ENST00000516672 IGHV3-74A0A0B4J1X5 117 aa2.11□□□□□ -2.07
SCARNA13-201ENST00000516672 TRAV8-2A0A0B4J237 113 aa2.11□□□□□ -2.07
SCARNA13-201ENST00000516672 IGHV3-66A0A0C4DH42 116 aa2.11□□□□□ -2.07
SCARNA13-201ENST00000516672 A0A0J9YX75 114 aa2.11□□□□□ -2.07
SCARNA13-201ENST00000516672 TEX48A0A1B0GUV7 120 aa2.11□□□□□ -2.07
SCARNA13-201ENST00000516672 SERTM2A0A1B0GWG4 89 aa2.11□□□□□ -2.07
SCARNA13-201ENST00000516672 RBAKDNA6NC62 111 aa2.11□□□□□ -2.07
SCARNA13-201ENST00000516672 GAGE10A6NGK3 116 aa2.11□□□□□ -2.07
SCARNA13-201ENST00000516672 LINC01546A6NGU7 62 aa2.11□□□□□ -2.07
SCARNA13-201ENST00000516672 SMIM9A6NGZ8 99 aa2.11□□□□□ -2.07
SCARNA13-201ENST00000516672 H3BUT2 72 aa2.11□□□□□ -2.07
SCARNA13-201ENST00000516672 SLC25A5P05141 298 aaKnown RBP2.11□□□□□ -2.07
SCARNA13-201ENST00000516672 SPRR2EP22531 72 aa2.11□□□□□ -2.07
SCARNA13-201ENST00000516672 SPRR2BP35325 72 aa2.11□□□□□ -2.07
SCARNA13-201ENST00000516672 SPRR2AP35326 72 aa2.11□□□□□ -2.07
SCARNA13-201ENST00000516672 CAMPP49913 170 aa2.11□□□□□ -2.07
SCARNA13-201ENST00000516672 ZNF138P52744 262 aa2.11□□□□□ -2.07
SCARNA13-201ENST00000516672 FXYD2P54710 66 aa2.11□□□□□ -2.07
SCARNA13-201ENST00000516672 DEFB131AP59861 70 aa2.11□□□□□ -2.07
SCARNA13-201ENST00000516672 C12orf74Q32Q52 190 aa2.11□□□□□ -2.07
SCARNA13-201ENST00000516672 TTC32Q5I0X7 151 aa2.11□□□□□ -2.07
SCARNA13-201ENST00000516672 PSMG4Q5JS54 123 aa2.11□□□□□ -2.07
SCARNA13-201ENST00000516672 PGLYRP4Q96LB8 373 aa2.11□□□□□ -2.07
SCARNA13-201ENST00000516672 LINC00477Q96M19 166 aa2.11□□□□□ -2.07
SCARNA13-201ENST00000516672 PAXXQ9BUH6 204 aa2.11□□□□□ -2.07
SCARNA13-201ENST00000516672 MAP1LC3CQ9BXW4 147 aa2.11□□□□□ -2.07
SCARNA13-201ENST00000516672 AAMDCQ9H7C9 122 aa2.11□□□□□ -2.07
SCARNA13-201ENST00000516672 SPANXB1Q9NS25 103 aaPredicted RBP2.11□□□□□ -2.07
SCARNA13-201ENST00000516672 HIGD1BQ9P298 99 aa2.11□□□□□ -2.07
SCARNA13-201ENST00000516672 HSPB8Q9UJY1 196 aa2.11□□□□□ -2.07
SCARNA13-201ENST00000516672 EPDR1Q9UM22 224 aa2.11□□□□□ -2.07
SCARNA13-201ENST00000516672 LENEPQ9Y5L5 61 aa2.11□□□□□ -2.07
SCARNA13-201ENST00000516672 IGKV3-7A0A075B6H7 116 aa2.1□□□□□ -2.07
SCARNA13-201ENST00000516672 IGKV2D-26A0A0A0MRZ7 120 aa2.1□□□□□ -2.07
SCARNA13-201ENST00000516672 A6NDN8 102 aa2.1□□□□□ -2.07
SCARNA13-201ENST00000516672 A8MWL6 223 aa2.1□□□□□ -2.07
SCARNA13-201ENST00000516672 E9PLD3 99 aa2.1□□□□□ -2.07
SCARNA13-201ENST00000516672 SIVA1O15304 175 aa2.1□□□□□ -2.07
SCARNA13-201ENST00000516672 SNAI2O43623 268 aa2.1□□□□□ -2.07
SCARNA13-201ENST00000516672 TCRAP04437 139 aa2.1□□□□□ -2.07
SCARNA13-201ENST00000516672 GIG44P09565 113 aaPredicted RBP2.1□□□□□ -2.07
SCARNA13-201ENST00000516672 ARMS2P0C7Q2 107 aa2.1□□□□□ -2.07
SCARNA13-201ENST00000516672 ZNF688P0C7X2 276 aa2.1□□□□□ -2.07
SCARNA13-201ENST00000516672 MIFP14174 115 aa2.1□□□□□ -2.07
SCARNA13-201ENST00000516672 AZU1P20160 251 aa2.1□□□□□ -2.07
SCARNA13-201ENST00000516672 CSN1S1P47710 185 aa2.1□□□□□ -2.07
SCARNA13-201ENST00000516672 LINC00315P59091 139 aa2.1□□□□□ -2.07
SCARNA13-201ENST00000516672 AMTNQ6UX39 209 aa2.1□□□□□ -2.07
SCARNA13-201ENST00000516672 ZNF493Q6ZR52 646 aa2.1□□□□□ -2.07
SCARNA13-201ENST00000516672 C9orf47Q6ZRZ4 202 aa2.1□□□□□ -2.07
SCARNA13-201ENST00000516672 GTF2H5Q6ZYL4 71 aa2.1□□□□□ -2.07
SCARNA13-201ENST00000516672 PCP2Q8IVA1 136 aa2.1□□□□□ -2.07
SCARNA13-201ENST00000516672 APRG1Q8IVJ8 170 aa2.1□□□□□ -2.07
SCARNA13-201ENST00000516672 Q8NAQ8 132 aa2.1□□□□□ -2.07
SCARNA13-201ENST00000516672 CSNK1G2-AS1Q8NCQ2 148 aa2.1□□□□□ -2.07
SCARNA13-201ENST00000516672 OR8A1Q8NGG7 326 aa2.1□□□□□ -2.07
SCARNA13-201ENST00000516672 OR10J6PQ8NGY7 276 aa2.1□□□□□ -2.07
SCARNA13-201ENST00000516672 OR10AG1Q8NH19 301 aa2.1□□□□□ -2.07
SCARNA13-201ENST00000516672 FMC1Q96HJ9 113 aa2.1□□□□□ -2.07
SCARNA13-201ENST00000516672 SIGMAR1Q99720 223 aa2.1□□□□□ -2.07
SCARNA13-201ENST00000516672 LINC00467Q9BRT7 94 aa2.1□□□□□ -2.07
SCARNA13-201ENST00000516672 KRTAP4-1Q9BYQ7 146 aa2.1□□□□□ -2.07
SCARNA13-201ENST00000516672 OTORQ9NRC9 128 aa2.1□□□□□ -2.07
SCARNA13-201ENST00000516672 SPCS1Q9Y6A9 102 aa2.1□□□□□ -2.07
SCARNA13-201ENST00000516672 SELENOKQ9Y6D0 94 aa2.1□□□□□ -2.07
SCARNA13-201ENST00000516672 FLGP20930 4061 aaPredicted RBP2.09□□□□□ -2.07
SCARNA13-201ENST00000516672 TRBV7-3A0A075B6L6 115 aa2.09□□□□□ -2.07
SCARNA13-201ENST00000516672 TRAV8-1A0A0A6YYK1 113 aa2.09□□□□□ -2.07
SCARNA13-201ENST00000516672 A0A1B0GUT8 65 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms