RNA–Protein interactions for RNA: ENST00000516538.1

RNU6-1046P-201, Transcript of RNA, U6 small nuclear 1046, pseudogene, humanhuman

BASIC

Gene RNU6-1046P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1046P-201ENST00000516538 PIRTP0C851 137 aa-2.41□□□□□ -2.8
RNU6-1046P-201ENST00000516538 SERPINB1P30740 379 aa-2.41□□□□□ -2.8
RNU6-1046P-201ENST00000516538 POLR2HP52434 150 aaKnown RBP-2.41□□□□□ -2.8
RNU6-1046P-201ENST00000516538 NDUFA12Q9UI09 145 aa-2.41□□□□□ -2.8
RNU6-1046P-201ENST00000516538 SMIM24O75264 130 aa-2.42□□□□□ -2.8
RNU6-1046P-201ENST00000516538 CCL18P55774 89 aa-2.42□□□□□ -2.8
RNU6-1046P-201ENST00000516538 RPL7L1Q6DKI1 246 aaKnown RBP-2.42□□□□□ -2.8
RNU6-1046P-201ENST00000516538 CCDC115Q96NT0 180 aa-2.42□□□□□ -2.8
RNU6-1046P-201ENST00000516538 PARVGQ9HBI0 331 aa-2.42□□□□□ -2.8
RNU6-1046P-201ENST00000516538 XIRP1Q702N8 1843 aaKnown RBP-2.42□□□□□ -2.8
RNU6-1046P-201ENST00000516538 CASKIN1Q8WXD9 1431 aa-2.42□□□□□ -2.8
RNU6-1046P-201ENST00000516538 NSD3Q9BZ95 1437 aa-2.42□□□□□ -2.8
RNU6-1046P-201ENST00000516538 MUC22E2RYF6 1773 aaPredicted RBP-2.43□□□□□ -2.8
RNU6-1046P-201ENST00000516538 A6NIN4 97 aa-2.43□□□□□ -2.8
RNU6-1046P-201ENST00000516538 HLA-DRB4P13762 266 aa-2.43□□□□□ -2.8
RNU6-1046P-201ENST00000516538 LINC01545Q5VT33 79 aa-2.43□□□□□ -2.8
RNU6-1046P-201ENST00000516538 ZNF818PQ6ZRF7 136 aa-2.43□□□□□ -2.8
RNU6-1046P-201ENST00000516538 CALML5Q9NZT1 146 aa-2.43□□□□□ -2.8
RNU6-1046P-201ENST00000516538 R4GMQ9 66 aa-2.43□□□□□ -2.8
RNU6-1046P-201ENST00000516538 HLA-DRB4X5D2U9 266 aa-2.43□□□□□ -2.8
RNU6-1046P-201ENST00000516538 NCR2O95944 276 aa-2.44□□□□□ -2.8
RNU6-1046P-201ENST00000516538 C9orf116Q5BN46 136 aaPredicted RBP-2.44□□□□□ -2.8
RNU6-1046P-201ENST00000516538 TMEM78Q5T7P6 136 aa-2.44□□□□□ -2.8
RNU6-1046P-201ENST00000516538 SPANXN1Q5VSR9 72 aa-2.44□□□□□ -2.8
RNU6-1046P-201ENST00000516538 Q6JHZ5 121 aa-2.44□□□□□ -2.8
RNU6-1046P-201ENST00000516538 C10orf82Q8WW14 230 aa-2.44□□□□□ -2.8
RNU6-1046P-201ENST00000516538 KNL1Q8NG31 2342 aa-2.45□□□□□ -2.8
RNU6-1046P-201ENST00000516538 CLLU1Q5K131 121 aa-2.45□□□□□ -2.8
RNU6-1046P-201ENST00000516538 CTXND1A0A1B0GTU2 59 aa-2.46□□□□□ -2.8
RNU6-1046P-201ENST00000516538 A0A1W2PRE2 83 aa-2.46□□□□□ -2.8
RNU6-1046P-201ENST00000516538 M0R135 149 aa-2.46□□□□□ -2.8
RNU6-1046P-201ENST00000516538 MT1AP04731 61 aa-2.46□□□□□ -2.8
RNU6-1046P-201ENST00000516538 COX17Q14061 63 aa-2.46□□□□□ -2.8
RNU6-1046P-201ENST00000516538 BOLA2Q9H3K6 86 aa-2.46□□□□□ -2.8
RNU6-1046P-201ENST00000516538 STOML2Q9UJZ1 356 aa-2.46□□□□□ -2.8
RNU6-1046P-201ENST00000516538 SYNMO15061 1565 aa-2.46□□□□□ -2.8
RNU6-1046P-201ENST00000516538 EIF3AQ14152 1382 aaKnown RBP-2.47□□□□□ -2.8
RNU6-1046P-201ENST00000516538 MAGOHBQ96A72 148 aaKnown RBP-2.47□□□□□ -2.8
RNU6-1046P-201ENST00000516538 MYH8P13535 1937 aa-2.47□□□□□ -2.8
RNU6-1046P-201ENST00000516538 DOCK1Q14185 1865 aa-2.48□□□□□ -2.81
RNU6-1046P-201ENST00000516538 SYS1-DBNDD2H3BUS1 97 aa-2.48□□□□□ -2.81
RNU6-1046P-201ENST00000516538 DPM2O94777 84 aa-2.48□□□□□ -2.81
RNU6-1046P-201ENST00000516538 PAEPP09466 180 aa-2.48□□□□□ -2.81
RNU6-1046P-201ENST00000516538 COX8AP10176 69 aa-2.48□□□□□ -2.81
RNU6-1046P-201ENST00000516538 RPL7P18124 248 aaKnown RBP-2.48□□□□□ -2.81
RNU6-1046P-201ENST00000516538 TMEM170BQ5T4T1 132 aa-2.48□□□□□ -2.81
RNU6-1046P-201ENST00000516538 OR9Q1Q8NGQ5 310 aa-2.48□□□□□ -2.81
RNU6-1046P-201ENST00000516538 BANF2Q9H503 90 aa-2.48□□□□□ -2.81
RNU6-1046P-201ENST00000516538 VPS13BQ7Z7G8 4022 aa-2.48□□□□□ -2.81
RNU6-1046P-201ENST00000516538 MRC1P22897 1456 aa-2.48□□□□□ -2.81
RNU6-1046P-201ENST00000516538 PXDNQ92626 1479 aa-2.48□□□□□ -2.81
RNU6-1046P-201ENST00000516538 PLECQ15149 4684 aaKnown RBP-2.48□□□□□ -2.81
RNU6-1046P-201ENST00000516538 IFNGP01579 166 aa-2.49□□□□□ -2.81
RNU6-1046P-201ENST00000516538 PPP1R2P3Q6NXS1 205 aa-2.49□□□□□ -2.81
RNU6-1046P-201ENST00000516538 PRDM2Q13029 1718 aa-2.49□□□□□ -2.81
RNU6-1046P-201ENST00000516538 PPP1R17O96001 155 aa-2.5□□□□□ -2.81
RNU6-1046P-201ENST00000516538 VSTM2AQ8TAG5 236 aa-2.5□□□□□ -2.81
RNU6-1046P-201ENST00000516538 LINC00312Q9Y6C7 94 aa-2.5□□□□□ -2.81
RNU6-1046P-201ENST00000516538 SBF2Q86WG5 1849 aa-2.5□□□□□ -2.81
RNU6-1046P-201ENST00000516538 DAPK1P53355 1430 aa-2.51□□□□□ -2.81
RNU6-1046P-201ENST00000516538 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-2.51□□□□□ -2.81
RNU6-1046P-201ENST00000516538 PIPP12273 146 aaPredicted RBP-2.51□□□□□ -2.81
RNU6-1046P-201ENST00000516538 ATPIF1Q9UII2 106 aa-2.51□□□□□ -2.81
RNU6-1046P-201ENST00000516538 ACACAQ13085 2346 aa-2.51□□□□□ -2.81
RNU6-1046P-201ENST00000516538 OVOS2A0A0G2JMS6 1433 aa-2.51□□□□□ -2.81
RNU6-1046P-201ENST00000516538 POLA1P09884 1462 aaPredicted RBP-2.52□□□□□ -2.81
RNU6-1046P-201ENST00000516538 ERCC6Q03468 1493 aa-2.52□□□□□ -2.81
RNU6-1046P-201ENST00000516538 LSM2Q9Y333 95 aaKnown RBP-2.52□□□□□ -2.81
RNU6-1046P-201ENST00000516538 NIPBLQ6KC79 2804 aaeCLIP-2.52□□□□□ -2.81
RNU6-1046P-201ENST00000516538 PRRC2CQ9Y520 2896 aaKnown RBP-2.52□□□□□ -2.81
RNU6-1046P-201ENST00000516538 RYR2Q92736 4967 aa-2.52□□□□□ -2.81
RNU6-1046P-201ENST00000516538 UBE2G1P62253 170 aa-2.53□□□□□ -2.81
RNU6-1046P-201ENST00000516538 C9orf62Q8N4C0 152 aa-2.53□□□□□ -2.81
RNU6-1046P-201ENST00000516538 MNS1Q8NEH6 495 aa-2.53□□□□□ -2.81
RNU6-1046P-201ENST00000516538 ZNF236Q9UL36 1845 aa-2.54□□□□□ -2.82
RNU6-1046P-201ENST00000516538 MT-ND4LP03901 98 aa-2.54□□□□□ -2.82
RNU6-1046P-201ENST00000516538 OR8I2Q8N0Y5 310 aa-2.54□□□□□ -2.82
RNU6-1046P-201ENST00000516538 APLNQ9ULZ1 77 aa-2.54□□□□□ -2.82
RNU6-1046P-201ENST00000516538 ROCK1Q13464 1354 aa-2.54□□□□□ -2.82
RNU6-1046P-201ENST00000516538 LYSTQ99698 3801 aa-2.54□□□□□ -2.82
RNU6-1046P-201ENST00000516538 PITX3O75364 302 aa-2.55□□□□□ -2.82
RNU6-1046P-201ENST00000516538 CCL8P80075 99 aa-2.55□□□□□ -2.82
RNU6-1046P-201ENST00000516538 TMEM244Q5VVB8 128 aa-2.55□□□□□ -2.82
RNU6-1046P-201ENST00000516538 TMEM35BQ8NCS4 154 aa-2.55□□□□□ -2.82
RNU6-1046P-201ENST00000516538 SPTSSBQ8NFR3 76 aa-2.55□□□□□ -2.82
RNU6-1046P-201ENST00000516538 HOPXQ9BPY8 73 aaPredicted RBP-2.55□□□□□ -2.82
RNU6-1046P-201ENST00000516538 MRPL40Q9NQ50 206 aaKnown RBP-2.55□□□□□ -2.82
RNU6-1046P-201ENST00000516538 TRBV20-1A0A075B6N2 111 aa-2.56□□□□□ -2.82
RNU6-1046P-201ENST00000516538 TRBV7-4A0A0J9YYF1 115 aa-2.56□□□□□ -2.82
RNU6-1046P-201ENST00000516538 CBLN1P23435 193 aa-2.56□□□□□ -2.82
RNU6-1046P-201ENST00000516538 TRIQKQ629K1 86 aa-2.56□□□□□ -2.82
RNU6-1046P-201ENST00000516538 CTAGE3PQ8IX95 158 aa-2.56□□□□□ -2.82
RNU6-1046P-201ENST00000516538 USMG5Q96IX5 58 aa-2.56□□□□□ -2.82
RNU6-1046P-201ENST00000516538 SAR1AQ9NR31 198 aa-2.56□□□□□ -2.82
RNU6-1046P-201ENST00000516538 MYH13Q9UKX3 1938 aa-2.56□□□□□ -2.82
RNU6-1046P-201ENST00000516538 NWD2Q9ULI1 1742 aa-2.56□□□□□ -2.82
RNU6-1046P-201ENST00000516538 KIAA0556O60303 1618 aa-2.57□□□□□ -2.82
RNU6-1046P-201ENST00000516538 ADGRB1O14514 1584 aa-2.57□□□□□ -2.82
RNU6-1046P-201ENST00000516538 TOMM20LQ6UXN7 152 aa-2.57□□□□□ -2.82
RNU6-1046P-201ENST00000516538 V9GYH0 126 aa-2.57□□□□□ -2.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms