RNA–Protein interactions for RNA: ENST00000516379.1

SNORA40.13-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 120 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.13-201ENST00000516379 PLGLB1Q02325 96 aa-4.39□□□□□ -3.11
SNORA40.13-201ENST00000516379 SNX29P2Q8IUI4 249 aa-4.39□□□□□ -3.11
SNORA40.13-201ENST00000516379 BORCS8Q96FH0 119 aa-4.39□□□□□ -3.11
SNORA40.13-201ENST00000516379 USE1Q9NZ43 259 aa-4.39□□□□□ -3.11
SNORA40.13-201ENST00000516379 CCDC179H3BU77 68 aa-4.4□□□□□ -3.11
SNORA40.13-201ENST00000516379 AIPO00170 330 aa-4.4□□□□□ -3.11
SNORA40.13-201ENST00000516379 HBDP02042 147 aa-4.4□□□□□ -3.11
SNORA40.13-201ENST00000516379 PIRTP0C851 137 aa-4.4□□□□□ -3.11
SNORA40.13-201ENST00000516379 CCDC122Q5T0U0 273 aa-4.4□□□□□ -3.11
SNORA40.13-201ENST00000516379 TMEM170BQ5T4T1 132 aa-4.4□□□□□ -3.11
SNORA40.13-201ENST00000516379 S4R3F8 94 aa-4.4□□□□□ -3.11
SNORA40.13-201ENST00000516379 MAP3K1Q13233 1512 aa-4.41□□□□□ -3.11
SNORA40.13-201ENST00000516379 PPP5D1E7EU14 171 aa-4.41□□□□□ -3.12
SNORA40.13-201ENST00000516379 APOA2P02652 100 aa-4.41□□□□□ -3.12
SNORA40.13-201ENST00000516379 MT1EP04732 61 aa-4.41□□□□□ -3.12
SNORA40.13-201ENST00000516379 PCBD1P61457 104 aa-4.41□□□□□ -3.12
SNORA40.13-201ENST00000516379 DEFB110Q30KQ9 67 aa-4.41□□□□□ -3.12
SNORA40.13-201ENST00000516379 SETBP1Q9Y6X0 1596 aa-4.41□□□□□ -3.12
SNORA40.13-201ENST00000516379 MED23Q9ULK4 1368 aa-4.41□□□□□ -3.12
SNORA40.13-201ENST00000516379 CTXND1A0A1B0GTU2 59 aa-4.42□□□□□ -3.12
SNORA40.13-201ENST00000516379 TMEM114B3SHH9 223 aa-4.42□□□□□ -3.12
SNORA40.13-201ENST00000516379 SSSCA1O60232 199 aa-4.42□□□□□ -3.12
SNORA40.13-201ENST00000516379 CRYGSP22914 178 aa-4.42□□□□□ -3.12
SNORA40.13-201ENST00000516379 CRYBA4P53673 196 aa-4.42□□□□□ -3.12
SNORA40.13-201ENST00000516379 HSPE1P61604 102 aaKnown RBP-4.42□□□□□ -3.12
SNORA40.13-201ENST00000516379 NUP35Q8NFH5 326 aa-4.42□□□□□ -3.12
SNORA40.13-201ENST00000516379 UFC1Q9Y3C8 167 aa-4.42□□□□□ -3.12
SNORA40.13-201ENST00000516379 MAP3K5Q99683 1374 aa-4.42□□□□□ -3.12
SNORA40.13-201ENST00000516379 MT1GP13640 62 aa-4.43□□□□□ -3.12
SNORA40.13-201ENST00000516379 LSM3P62310 102 aaKnown RBP-4.43□□□□□ -3.12
SNORA40.13-201ENST00000516379 COTL1Q14019 142 aa-4.43□□□□□ -3.12
SNORA40.13-201ENST00000516379 HSD17B12Q53GQ0 312 aa-4.43□□□□□ -3.12
SNORA40.13-201ENST00000516379 CNPY4Q8N129 248 aa-4.43□□□□□ -3.12
SNORA40.13-201ENST00000516379 VSTM2AQ8TAG5 236 aa-4.43□□□□□ -3.12
SNORA40.13-201ENST00000516379 C10orf82Q8WW14 230 aa-4.43□□□□□ -3.12
SNORA40.13-201ENST00000516379 KIF21AQ7Z4S6 1674 aa-4.44□□□□□ -3.12
SNORA40.13-201ENST00000516379 COX17Q14061 63 aa-4.44□□□□□ -3.12
SNORA40.13-201ENST00000516379 FAM9CQ8IZT9 166 aa-4.44□□□□□ -3.12
SNORA40.13-201ENST00000516379 METTL1Q9UBP6 276 aaKnown RBP-4.44□□□□□ -3.12
SNORA40.13-201ENST00000516379 TRAV13-1A0A0B4J241 112 aa-4.45□□□□□ -3.12
SNORA40.13-201ENST00000516379 SDC2P34741 201 aa-4.45□□□□□ -3.12
SNORA40.13-201ENST00000516379 SRP9P49458 86 aaKnown RBP-4.45□□□□□ -3.12
SNORA40.13-201ENST00000516379 GNG5P63218 68 aa-4.45□□□□□ -3.12
SNORA40.13-201ENST00000516379 TMED2Q15363 201 aa-4.45□□□□□ -3.12
SNORA40.13-201ENST00000516379 LINC00305Q7Z4B0 112 aa-4.45□□□□□ -3.12
SNORA40.13-201ENST00000516379 ADGRG4Q8IZF6 3080 aa-4.45□□□□□ -3.12
SNORA40.13-201ENST00000516379 MARF1Q9Y4F3 1742 aaKnown RBP-4.46□□□□□ -3.12
SNORA40.13-201ENST00000516379 BOD1L1Q8NFC6 3051 aa-4.46□□□□□ -3.12
SNORA40.13-201ENST00000516379 H3BMG7 143 aa-4.46□□□□□ -3.12
SNORA40.13-201ENST00000516379 H7C1C5 153 aa-4.46□□□□□ -3.12
SNORA40.13-201ENST00000516379 LCN6P62502 163 aa-4.46□□□□□ -3.12
SNORA40.13-201ENST00000516379 MT1LQ93083 61 aa-4.46□□□□□ -3.12
SNORA40.13-201ENST00000516379 PRNDQ9UKY0 176 aa-4.46□□□□□ -3.12
SNORA40.13-201ENST00000516379 R4GMQ9 66 aa-4.46□□□□□ -3.12
SNORA40.13-201ENST00000516379 NKTRP30414 1462 aaKnown RBP-4.47□□□□□ -3.12
SNORA40.13-201ENST00000516379 GABARAPH6UMI1 98 aa-4.47□□□□□ -3.13
SNORA40.13-201ENST00000516379 YKT6O15498 198 aa-4.47□□□□□ -3.13
SNORA40.13-201ENST00000516379 ARPC5O15511 151 aa-4.47□□□□□ -3.13
SNORA40.13-201ENST00000516379 MT1BP07438 61 aa-4.47□□□□□ -3.13
SNORA40.13-201ENST00000516379 MT1MQ8N339 61 aa-4.47□□□□□ -3.13
SNORA40.13-201ENST00000516379 Q8N8P6 123 aa-4.47□□□□□ -3.13
SNORA40.13-201ENST00000516379 NMNAT1Q9HAN9 279 aaPredicted RBP-4.47□□□□□ -3.13
SNORA40.13-201ENST00000516379 NDUFA4L2Q9NRX3 87 aa-4.47□□□□□ -3.13
SNORA40.13-201ENST00000516379 BCORQ6W2J9 1755 aa-4.48□□□□□ -3.13
SNORA40.13-201ENST00000516379 UHRF1BP1LA0JNW5 1464 aa-4.48□□□□□ -3.13
SNORA40.13-201ENST00000516379 E2F6O75461 281 aa-4.48□□□□□ -3.13
SNORA40.13-201ENST00000516379 CSN2P05814 226 aa-4.48□□□□□ -3.13
SNORA40.13-201ENST00000516379 CHMP4BQ9H444 224 aaKnown RBP-4.48□□□□□ -3.13
SNORA40.13-201ENST00000516379 CTNNBIP1Q9NSA3 81 aaPredicted RBP-4.48□□□□□ -3.13
SNORA40.13-201ENST00000516379 FAM32AQ9Y421 112 aaKnown RBP-4.48□□□□□ -3.13
SNORA40.13-201ENST00000516379 PXDNQ92626 1479 aa-4.49□□□□□ -3.13
SNORA40.13-201ENST00000516379 ADCY9O60503 1353 aa-4.49□□□□□ -3.13
SNORA40.13-201ENST00000516379 TRDV1A0A1B0GX56 115 aa-4.49□□□□□ -3.13
SNORA40.13-201ENST00000516379 G3V2T6 193 aa-4.49□□□□□ -3.13
SNORA40.13-201ENST00000516379 S100A9P06702 114 aaKnown RBP-4.49□□□□□ -3.13
SNORA40.13-201ENST00000516379 S100A6P06703 90 aa-4.49□□□□□ -3.13
SNORA40.13-201ENST00000516379 LELP1Q5T871 98 aa-4.49□□□□□ -3.13
SNORA40.13-201ENST00000516379 SLC35B3Q9H1N7 401 aa-4.49□□□□□ -3.13
SNORA40.13-201ENST00000516379 Q6AWC8 147 aa-4.5□□□□□ -3.13
SNORA40.13-201ENST00000516379 CROCCP2Q86T23 111 aa-4.5□□□□□ -3.13
SNORA40.13-201ENST00000516379 NDUFA12Q9UI09 145 aa-4.5□□□□□ -3.13
SNORA40.13-201ENST00000516379 NOP16Q9Y3C1 178 aaKnown RBP-4.5□□□□□ -3.13
SNORA40.13-201ENST00000516379 YTHDC2Q9H6S0 1430 aaKnown RBP-4.51□□□□□ -3.13
SNORA40.13-201ENST00000516379 PPP1R17O96001 155 aa-4.51□□□□□ -3.13
SNORA40.13-201ENST00000516379 BTF3L4Q96K17 158 aa-4.51□□□□□ -3.13
SNORA40.13-201ENST00000516379 CRIPTQ9P021 101 aa-4.51□□□□□ -3.13
SNORA40.13-201ENST00000516379 SSR3Q9UNL2 185 aa-4.51□□□□□ -3.13
SNORA40.13-201ENST00000516379 MYH3P11055 1940 aa-4.52□□□□□ -3.13
SNORA40.13-201ENST00000516379 TRBV7-6A0A0J9YX20 115 aa-4.52□□□□□ -3.13
SNORA40.13-201ENST00000516379 UQCRQO14949 82 aa-4.52□□□□□ -3.13
SNORA40.13-201ENST00000516379 MT2AP02795 61 aa-4.52□□□□□ -3.13
SNORA40.13-201ENST00000516379 SLC25A5P05141 298 aaKnown RBP-4.52□□□□□ -3.13
SNORA40.13-201ENST00000516379 LTC4SQ16873 150 aa-4.52□□□□□ -3.13
SNORA40.13-201ENST00000516379 LIN52Q52LA3 116 aa-4.52□□□□□ -3.13
SNORA40.13-201ENST00000516379 ATP6V0E2Q8NHE4 81 aa-4.52□□□□□ -3.13
SNORA40.13-201ENST00000516379 SELENOSQ9BQE4 189 aa-4.52□□□□□ -3.13
SNORA40.13-201ENST00000516379 STOML2Q9UJZ1 356 aa-4.52□□□□□ -3.13
SNORA40.13-201ENST00000516379 ZCCHC11Q5TAX3 1644 aaKnown RBP-4.53□□□□□ -3.13
SNORA40.13-201ENST00000516379 ERICH2A1L162 156 aa-4.53□□□□□ -3.13
SNORA40.13-201ENST00000516379 M0QZK8 103 aa-4.53□□□□□ -3.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms