RNA–Protein interactions for RNA: ENST00000515527.1

SMAD1-216, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 632 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-216ENST00000515527 OR2D3Q8NGH3 330 aa7.24□□□□□ -1.25
SMAD1-216ENST00000515527 PGLYRP4Q96LB8 373 aa7.24□□□□□ -1.25
SMAD1-216ENST00000515527 C2orf48Q96LS8 159 aa7.24□□□□□ -1.25
SMAD1-216ENST00000515527 IMMP2LQ96T52 175 aa7.24□□□□□ -1.25
SMAD1-216ENST00000515527 GAGE2DQ9UEU5 116 aa7.24□□□□□ -1.25
SMAD1-216ENST00000515527 LINC00959A0A1B0GUT2 108 aa7.23□□□□□ -1.25
SMAD1-216ENST00000515527 NKX2-5P52952 324 aaPredicted RBP7.23□□□□□ -1.25
SMAD1-216ENST00000515527 MRPS26Q9BYN8 205 aaKnown RBP7.23□□□□□ -1.25
SMAD1-216ENST00000515527 RSL24D1Q9UHA3 163 aaKnown RBP7.23□□□□□ -1.25
SMAD1-216ENST00000515527 LSM5Q9Y4Y9 91 aaKnown RBP7.23□□□□□ -1.25
SMAD1-216ENST00000515527 TRAV34A0A0B4J273 112 aa7.22□□□□□ -1.25
SMAD1-216ENST00000515527 SMIM17P0DL12 118 aa7.22□□□□□ -1.25
SMAD1-216ENST00000515527 SULT1A1P50225 295 aa7.22□□□□□ -1.25
SMAD1-216ENST00000515527 COTL1Q14019 142 aa7.22□□□□□ -1.25
SMAD1-216ENST00000515527 CD164L2Q6UWJ8 174 aa7.22□□□□□ -1.25
SMAD1-216ENST00000515527 ZNF471Q9BX82 626 aaPredicted RBP7.22□□□□□ -1.25
SMAD1-216ENST00000515527 C11orf1Q9H5F2 150 aa7.22□□□□□ -1.25
SMAD1-216ENST00000515527 A6NHS1 94 aa7.21□□□□□ -1.26
SMAD1-216ENST00000515527 IL18Q14116 193 aa7.21□□□□□ -1.26
SMAD1-216ENST00000515527 ATP6V1FQ16864 119 aa7.21□□□□□ -1.26
SMAD1-216ENST00000515527 C5orf17Q8NAS9 161 aa7.21□□□□□ -1.26
SMAD1-216ENST00000515527 OR10AG1Q8NH19 301 aa7.21□□□□□ -1.26
SMAD1-216ENST00000515527 AP3S1Q92572 193 aa7.21□□□□□ -1.26
SMAD1-216ENST00000515527 KCNIP2Q9NS61 270 aa7.21□□□□□ -1.26
SMAD1-216ENST00000515527 NDUFA12Q9UI09 145 aa7.21□□□□□ -1.26
SMAD1-216ENST00000515527 DEFA3P59666 94 aa7.2□□□□□ -1.26
SMAD1-216ENST00000515527 KRTAP19-6Q3LI70 58 aa7.2□□□□□ -1.26
SMAD1-216ENST00000515527 STX12Q86Y82 276 aa7.2□□□□□ -1.26
SMAD1-216ENST00000515527 C9orf170A2RU37 121 aa7.19□□□□□ -1.26
SMAD1-216ENST00000515527 SH2D1AO60880 128 aa7.19□□□□□ -1.26
SMAD1-216ENST00000515527 SSTP61278 116 aa7.19□□□□□ -1.26
SMAD1-216ENST00000515527 ARL2-SNX15V9GYD0 113 aa7.19□□□□□ -1.26
SMAD1-216ENST00000515527 MUC21A0A140T8X8 626 aa7.18□□□□□ -1.26
SMAD1-216ENST00000515527 IGSF23A1L1A6 192 aa7.18□□□□□ -1.26
SMAD1-216ENST00000515527 M0QY20 66 aa7.18□□□□□ -1.26
SMAD1-216ENST00000515527 COX7A2LO14548 114 aa7.18□□□□□ -1.26
SMAD1-216ENST00000515527 BCE1O60756 84 aa7.18□□□□□ -1.26
SMAD1-216ENST00000515527 MGPP08493 103 aa7.18□□□□□ -1.26
SMAD1-216ENST00000515527 NCS1P62166 190 aa7.18□□□□□ -1.26
SMAD1-216ENST00000515527 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.17□□□□□ -1.26
SMAD1-216ENST00000515527 IGKV2-29A2NJV5 120 aaPredicted RBP7.17□□□□□ -1.26
SMAD1-216ENST00000515527 FAUP35544 74 aaKnown RBP7.17□□□□□ -1.26
SMAD1-216ENST00000515527 CRIP1P50238 77 aa7.17□□□□□ -1.26
SMAD1-216ENST00000515527 VBP1P61758 197 aa7.17□□□□□ -1.26
SMAD1-216ENST00000515527 SPAG11BQ08648 103 aa7.17□□□□□ -1.26
SMAD1-216ENST00000515527 LRRC37A5PQ49AS3 106 aa7.17□□□□□ -1.26
SMAD1-216ENST00000515527 SPANXN1Q5VSR9 72 aa7.17□□□□□ -1.26
SMAD1-216ENST00000515527 C3orf22Q8N5N4 141 aa7.17□□□□□ -1.26
SMAD1-216ENST00000515527 RGS5O15539 181 aa7.16□□□□□ -1.26
SMAD1-216ENST00000515527 PQLC2Q6ZP29 291 aa7.16□□□□□ -1.26
SMAD1-216ENST00000515527 TMEM252Q8N6L7 170 aa7.16□□□□□ -1.26
SMAD1-216ENST00000515527 SLC25A21Q9BQT8 299 aaPredicted RBP7.16□□□□□ -1.26
SMAD1-216ENST00000515527 SMDT1Q9H4I9 107 aa7.16□□□□□ -1.26
SMAD1-216ENST00000515527 MRPL35Q9NZE8 188 aaKnown RBP7.16□□□□□ -1.26
SMAD1-216ENST00000515527 C17orf112F2Z3M2 114 aa7.15□□□□□ -1.26
SMAD1-216ENST00000515527 TLX1NBP0CAT3 122 aa7.15□□□□□ -1.26
SMAD1-216ENST00000515527 PVALBP20472 110 aaPredicted RBP7.15□□□□□ -1.26
SMAD1-216ENST00000515527 EPDR1Q9UM22 224 aa7.15□□□□□ -1.26
SMAD1-216ENST00000515527 SUMO4Q6EEV6 95 aa7.14□□□□□ -1.27
SMAD1-216ENST00000515527 TMEM101Q96IK0 257 aa7.14□□□□□ -1.27
SMAD1-216ENST00000515527 BTF3L4Q96K17 158 aa7.14□□□□□ -1.27
SMAD1-216ENST00000515527 SUMO1P63165 101 aaKnown RBP7.13□□□□□ -1.27
SMAD1-216ENST00000515527 RASL11AQ6T310 242 aa7.13□□□□□ -1.27
SMAD1-216ENST00000515527 AP1S3Q96PC3 154 aa7.13□□□□□ -1.27
SMAD1-216ENST00000515527 G3V3Q6 166 aa7.12□□□□□ -1.27
SMAD1-216ENST00000515527 H7C423 109 aa7.11□□□□□ -1.27
SMAD1-216ENST00000515527 NDUFA1O15239 70 aa7.11□□□□□ -1.27
SMAD1-216ENST00000515527 HMGB3O15347 200 aaKnown RBP7.11□□□□□ -1.27
SMAD1-216ENST00000515527 ZNF25P17030 456 aaPredicted RBP7.11□□□□□ -1.27
SMAD1-216ENST00000515527 UBE2AP49459 152 aa7.11□□□□□ -1.27
SMAD1-216ENST00000515527 LBHQ53QV2 105 aaPredicted RBP7.11□□□□□ -1.27
SMAD1-216ENST00000515527 C10orf25Q5T742 122 aa7.11□□□□□ -1.27
SMAD1-216ENST00000515527 WDR61Q9GZS3 305 aaKnown RBP7.11□□□□□ -1.27
SMAD1-216ENST00000515527 NIT2Q9NQR4 276 aa7.11□□□□□ -1.27
SMAD1-216ENST00000515527 KMT2DO14686 5537 aa7.1□□□□□ -1.27
SMAD1-216ENST00000515527 A0A1W2PPV4 95 aa7.1□□□□□ -1.27
SMAD1-216ENST00000515527 CTRLP40313 264 aa7.1□□□□□ -1.27
SMAD1-216ENST00000515527 TMEM241Q24JQ0 296 aa7.1□□□□□ -1.27
SMAD1-216ENST00000515527 C9orf129Q5T035 196 aaKnown RBP7.1□□□□□ -1.27
SMAD1-216ENST00000515527 C5orf38Q86SI9 138 aa7.1□□□□□ -1.27
SMAD1-216ENST00000515527 Q86TA4 180 aa7.1□□□□□ -1.27
SMAD1-216ENST00000515527 C22orf24Q9Y442 160 aa7.1□□□□□ -1.27
SMAD1-216ENST00000515527 FAM25EA8MYX2 175 aa7.09□□□□□ -1.27
SMAD1-216ENST00000515527 FAM19A2Q8N3H0 131 aa7.09□□□□□ -1.27
SMAD1-216ENST00000515527 C6orf48Q9UBA6 75 aa7.09□□□□□ -1.27
SMAD1-216ENST00000515527 ALG5Q9Y673 324 aa7.09□□□□□ -1.27
SMAD1-216ENST00000515527 CTDSP2O14595 271 aa7.08□□□□□ -1.28
SMAD1-216ENST00000515527 APCSP02743 223 aa7.08□□□□□ -1.28
SMAD1-216ENST00000515527 OR5AL1P0C617 328 aa7.08□□□□□ -1.28
SMAD1-216ENST00000515527 KRTAP2-3P0C7H8 128 aa7.08□□□□□ -1.28
SMAD1-216ENST00000515527 NHLH2Q02577 135 aa7.08□□□□□ -1.28
SMAD1-216ENST00000515527 Q6Q795 121 aa7.08□□□□□ -1.28
SMAD1-216ENST00000515527 UNQ6190/PRO20217Q6UXQ8 127 aa7.08□□□□□ -1.28
SMAD1-216ENST00000515527 Q6ZNX1 250 aa7.08□□□□□ -1.28
SMAD1-216ENST00000515527 KRTAP2-4Q9BYR9 128 aa7.08□□□□□ -1.28
SMAD1-216ENST00000515527 F8WDY8 70 aa7.07□□□□□ -1.28
SMAD1-216ENST00000515527 SNAI2O43623 268 aa7.07□□□□□ -1.28
SMAD1-216ENST00000515527 ARL14EPLP0DKL9 152 aa7.07□□□□□ -1.28
SMAD1-216ENST00000515527 NTF3P20783 257 aa7.07□□□□□ -1.28
SMAD1-216ENST00000515527 OR10D4PQ8NGN7 298 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms