RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 SMG1Q96Q15 3661 aaKnown RBP2.7□□□□□ -1.98
CAST-242ENST00000515063 COL6A6A6NMZ7 2263 aa2.7□□□□□ -1.98
CAST-242ENST00000515063 TRBV25-1A0A075B6N4 114 aa2.7□□□□□ -1.98
CAST-242ENST00000515063 IGHV3OR16-13A0A075B7E8 117 aa2.7□□□□□ -1.98
CAST-242ENST00000515063 A0A096LNT2 108 aa2.7□□□□□ -1.98
CAST-242ENST00000515063 IGHV3-49A0A0A0MS15 119 aa2.7□□□□□ -1.98
CAST-242ENST00000515063 IGHV3-74A0A0B4J1X5 117 aa2.7□□□□□ -1.98
CAST-242ENST00000515063 TRAV8-6A0A0B4J262 113 aa2.7□□□□□ -1.98
CAST-242ENST00000515063 A0A1B0GWB2 263 aa2.7□□□□□ -1.98
CAST-242ENST00000515063 E9PLD3 99 aa2.7□□□□□ -1.98
CAST-242ENST00000515063 K7EP34 96 aa2.7□□□□□ -1.98
CAST-242ENST00000515063 K7EQG2 157 aa2.7□□□□□ -1.98
CAST-242ENST00000515063 K7ERU9 68 aa2.7□□□□□ -1.98
CAST-242ENST00000515063 TRBV12-3P01733 135 aa2.7□□□□□ -1.98
CAST-242ENST00000515063 LGALS1P09382 135 aaKnown RBP2.7□□□□□ -1.98
CAST-242ENST00000515063 NMUP48645 174 aa2.7□□□□□ -1.98
CAST-242ENST00000515063 CRYBA4P53673 196 aa2.7□□□□□ -1.98
CAST-242ENST00000515063 NDUFV3P56181 108 aaKnown RBP2.7□□□□□ -1.98
CAST-242ENST00000515063 LINC00315P59091 139 aa2.7□□□□□ -1.98
CAST-242ENST00000515063 SNRPD3P62318 126 aaKnown RBP2.7□□□□□ -1.98
CAST-242ENST00000515063 BLCAPP62952 87 aa2.7□□□□□ -1.98
CAST-242ENST00000515063 RHOHQ15669 191 aa2.7□□□□□ -1.98
CAST-242ENST00000515063 LY6EQ16553 131 aa2.7□□□□□ -1.98
CAST-242ENST00000515063 AMMECR1LQ6DCA0 310 aa2.7□□□□□ -1.98
CAST-242ENST00000515063 CEND1Q8N111 149 aa2.7□□□□□ -1.98
CAST-242ENST00000515063 UBE2E2Q96LR5 201 aa2.7□□□□□ -1.98
CAST-242ENST00000515063 C9orf85Q96MD7 179 aa2.7□□□□□ -1.98
CAST-242ENST00000515063 C18orf15Q96N68 181 aa2.7□□□□□ -1.98
CAST-242ENST00000515063 SCGB3A1Q96QR1 104 aa2.7□□□□□ -1.98
CAST-242ENST00000515063 TIMM17AQ99595 171 aa2.7□□□□□ -1.98
CAST-242ENST00000515063 CHAC1Q9BUX1 264 aa2.7□□□□□ -1.98
CAST-242ENST00000515063 MRPL35Q9NZE8 188 aaKnown RBP2.7□□□□□ -1.98
CAST-242ENST00000515063 LINC00527Q9UJ94 153 aa2.7□□□□□ -1.98
CAST-242ENST00000515063 CHTOPQ9Y3Y2 248 aaKnown RBP2.7□□□□□ -1.98
CAST-242ENST00000515063 KIF25-AS1Q9Y6Z4 181 aa2.7□□□□□ -1.98
CAST-242ENST00000515063 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.7□□□□□ -1.981e-7■■■■■ 36.8
CAST-242ENST00000515063 TRBV7-3A0A075B6L6 115 aa2.69□□□□□ -1.98
CAST-242ENST00000515063 IGKV2D-26A0A0A0MRZ7 120 aa2.69□□□□□ -1.98
CAST-242ENST00000515063 A0A0J9YX75 114 aa2.69□□□□□ -1.98
CAST-242ENST00000515063 TRBV27A0A0K0K1C4 114 aa2.69□□□□□ -1.98
CAST-242ENST00000515063 MYMXA0A1B0GTQ4 84 aa2.69□□□□□ -1.98
CAST-242ENST00000515063 A0A1W2PPM0 123 aa2.69□□□□□ -1.98
CAST-242ENST00000515063 A8MU10 97 aa2.69□□□□□ -1.98
CAST-242ENST00000515063 OR11H12B2RN74 326 aa2.69□□□□□ -1.98
CAST-242ENST00000515063 IGHV3-11P01762 117 aa2.69□□□□□ -1.98
CAST-242ENST00000515063 FABP2P12104 132 aa2.69□□□□□ -1.98
CAST-242ENST00000515063 RNASE4P34096 147 aaKnown RBP2.69□□□□□ -1.98
CAST-242ENST00000515063 FXYD7P58549 80 aa2.69□□□□□ -1.98
CAST-242ENST00000515063 HERVK_113P61574 105 aa2.69□□□□□ -1.98
CAST-242ENST00000515063 RBX1P62877 108 aa2.69□□□□□ -1.98
CAST-242ENST00000515063 PMVKQ15126 192 aa2.69□□□□□ -1.98
CAST-242ENST00000515063 DEFB112Q30KQ8 113 aa2.69□□□□□ -1.98
CAST-242ENST00000515063 NSUN5P1Q3KNT7 163 aa2.69□□□□□ -1.98
CAST-242ENST00000515063 C2orf66Q6UXQ4 117 aa2.69□□□□□ -1.98
CAST-242ENST00000515063 FOXI2Q6ZQN5 318 aa2.69□□□□□ -1.98
CAST-242ENST00000515063 Q6ZVH6 145 aa2.69□□□□□ -1.98
CAST-242ENST00000515063 PCP2Q8IVA1 136 aa2.69□□□□□ -1.98
CAST-242ENST00000515063 Q8N2B8 174 aa2.69□□□□□ -1.98
CAST-242ENST00000515063 TMEM86BQ8N661 226 aa2.69□□□□□ -1.98
CAST-242ENST00000515063 OR11H1Q8NG94 326 aa2.69□□□□□ -1.98
CAST-242ENST00000515063 OR11H2Q8NH07 326 aa2.69□□□□□ -1.98
CAST-242ENST00000515063 KIR2DL4Q99706 377 aa2.69□□□□□ -1.98
CAST-242ENST00000515063 LINC00467Q9BRT7 94 aa2.69□□□□□ -1.98
CAST-242ENST00000515063 CST9LQ9H4G1 147 aa2.69□□□□□ -1.98
CAST-242ENST00000515063 VPREB3Q9UKI3 123 aa2.69□□□□□ -1.98
CAST-242ENST00000515063 CYSLTR1Q9Y271 337 aa2.69□□□□□ -1.98
CAST-242ENST00000515063 ZNF256Q9Y2P7 627 aaPredicted RBP2.69□□□□□ -1.98
CAST-242ENST00000515063 PRRC2AP48634 2157 aaKnown RBP2.68□□□□□ -1.98
CAST-242ENST00000515063 MUC4Q99102 2169 aa2.68□□□□□ -1.98
CAST-242ENST00000515063 NBASA2RRP1 2371 aa2.68□□□□□ -1.98
CAST-242ENST00000515063 LRBAP50851 2863 aa2.68□□□□□ -1.98
CAST-242ENST00000515063 MED13LQ71F56 2210 aa2.68□□□□□ -1.98
CAST-242ENST00000515063 DCHS2Q6V1P9 2916 aa2.68□□□□□ -1.98
CAST-242ENST00000515063 IGHV1OR15-1A0A075B7D0 117 aa2.68□□□□□ -1.98
CAST-242ENST00000515063 TRAV26-2A0A0B4J265 109 aa2.68□□□□□ -1.98
CAST-242ENST00000515063 IGHV3-16A0A0C4DH30 117 aa2.68□□□□□ -1.98
CAST-242ENST00000515063 IGIPA6NJ69 53 aa2.68□□□□□ -1.98
CAST-242ENST00000515063 C11orf86A6NJI1 115 aa2.68□□□□□ -1.98
CAST-242ENST00000515063 H3BUT2 72 aa2.68□□□□□ -1.98
CAST-242ENST00000515063 GNRH2O43555 120 aa2.68□□□□□ -1.98
CAST-242ENST00000515063 MGPP08493 103 aa2.68□□□□□ -1.98
CAST-242ENST00000515063 PRB4P10163 310 aaPredicted RBP2.68□□□□□ -1.98
CAST-242ENST00000515063 OCIAD2Q56VL3 154 aa2.68□□□□□ -1.98
CAST-242ENST00000515063 LYRM7Q5U5X0 104 aa2.68□□□□□ -1.98
CAST-242ENST00000515063 ZFP2Q6ZN57 461 aa2.68□□□□□ -1.98
CAST-242ENST00000515063 NEGR1Q7Z3B1 354 aa2.68□□□□□ -1.98
CAST-242ENST00000515063 C14orf178Q8N769 122 aaPredicted RBP2.68□□□□□ -1.98
CAST-242ENST00000515063 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.68□□□□□ -1.98
CAST-242ENST00000515063 BAALCQ8WXS3 180 aa2.68□□□□□ -1.98
CAST-242ENST00000515063 SPANXB1Q9NS25 103 aaPredicted RBP2.68□□□□□ -1.98
CAST-242ENST00000515063 TP73-AS1Q9UF72 201 aa2.68□□□□□ -1.98
CAST-242ENST00000515063 HECTD1Q9ULT8 2610 aa2.68□□□□□ -1.98
CAST-242ENST00000515063 MYO18BQ8IUG5 2567 aa2.67□□□□□ -1.98
CAST-242ENST00000515063 MYO9AB2RTY4 2548 aa2.67□□□□□ -1.98
CAST-242ENST00000515063 TRAV25A0A0B4J276 109 aa2.67□□□□□ -1.98
CAST-242ENST00000515063 SDHAF1A6NFY7 115 aa2.67□□□□□ -1.98
CAST-242ENST00000515063 A8MWV9 139 aa2.67□□□□□ -1.98
CAST-242ENST00000515063 IGLL5B9A064 214 aa2.67□□□□□ -1.98
CAST-242ENST00000515063 F6UB75 175 aa2.67□□□□□ -1.98
CAST-242ENST00000515063 F8W1H4 67 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms