RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 FAM229AH3BQW9 127 aa16.04■□□□□ 0.16
SNF8-213ENST00000514929 UBE2L6O14933 153 aa16.04■□□□□ 0.16
SNF8-213ENST00000514929 AMTP48728 403 aa16.04■□□□□ 0.16
SNF8-213ENST00000514929 REG3AQ06141 175 aa16.03■□□□□ 0.16
SNF8-213ENST00000514929 TEX261Q6UWH6 196 aa16.02■□□□□ 0.16
SNF8-213ENST00000514929 C20orf203Q8NBC4 194 aa16.02■□□□□ 0.16
SNF8-213ENST00000514929 RPL39LQ96EH5 51 aaKnown RBP16.02■□□□□ 0.16
SNF8-213ENST00000514929 OSTCQ9NRP0 149 aa16.02■□□□□ 0.16
SNF8-213ENST00000514929 FAT1Q14517 4588 aa16.01■□□□□ 0.15
SNF8-213ENST00000514929 A0A1B0GUV1 79 aa16.01■□□□□ 0.15
SNF8-213ENST00000514929 USP17L23D6RBM5 183 aa16.01■□□□□ 0.15
SNF8-213ENST00000514929 INAFM2P0DMQ5 153 aa16.01■□□□□ 0.15
SNF8-213ENST00000514929 Q6ZSA8 131 aa16.01■□□□□ 0.15
SNF8-213ENST00000514929 TSKUQ8WUA8 353 aa16.01■□□□□ 0.15
SNF8-213ENST00000514929 IGLV4-60A0A075B6I1 120 aa16■□□□□ 0.15
SNF8-213ENST00000514929 HIGD1CA8MV81 97 aa16■□□□□ 0.15
SNF8-213ENST00000514929 GFRA4Q9GZZ7 299 aa16■□□□□ 0.15
SNF8-213ENST00000514929 IGLV10-54A0A075B6I4 117 aa15.99■□□□□ 0.15
SNF8-213ENST00000514929 A0A1B0GUT8 65 aa15.99■□□□□ 0.15
SNF8-213ENST00000514929 TMEM241Q24JQ0 296 aa15.98■□□□□ 0.15
SNF8-213ENST00000514929 FAM74A3Q4VXF1 159 aa15.98■□□□□ 0.15
SNF8-213ENST00000514929 TRAV8-4A0A0B4J246 113 aa15.97■□□□□ 0.15
SNF8-213ENST00000514929 FAM231BA6NCW3 169 aa15.97■□□□□ 0.15
SNF8-213ENST00000514929 KRTAP26-1Q6PEX3 210 aa15.97■□□□□ 0.15
SNF8-213ENST00000514929 DNAH8Q96JB1 4490 aa15.97■□□□□ 0.15
SNF8-213ENST00000514929 SDHAF1A6NFY7 115 aa15.96■□□□□ 0.15
SNF8-213ENST00000514929 NCR2O95944 276 aa15.96■□□□□ 0.15
SNF8-213ENST00000514929 ISOC2Q96AB3 205 aa15.95■□□□□ 0.14
SNF8-213ENST00000514929 TMEM191AQ9H0A3 160 aa15.95■□□□□ 0.14
SNF8-213ENST00000514929 V9GYV3 84 aa15.95■□□□□ 0.14
SNF8-213ENST00000514929 APCSP02743 223 aa15.94■□□□□ 0.14
SNF8-213ENST00000514929 PRSS1P07477 247 aa15.94■□□□□ 0.14
SNF8-213ENST00000514929 PEA15Q15121 130 aa15.94■□□□□ 0.14
SNF8-213ENST00000514929 C9JQL5 133 aa15.93■□□□□ 0.14
SNF8-213ENST00000514929 PMCHP20382 165 aa15.93■□□□□ 0.14
SNF8-213ENST00000514929 RPL23P62829 140 aaKnown RBP15.93■□□□□ 0.14
SNF8-213ENST00000514929 ADIRFQ15847 76 aa15.93■□□□□ 0.14
SNF8-213ENST00000514929 AMMECR1LQ6DCA0 310 aa15.93■□□□□ 0.14
SNF8-213ENST00000514929 TRBV6-5A0A0K0K1A5 114 aa15.92■□□□□ 0.14
SNF8-213ENST00000514929 I3L3M4 83 aa15.92■□□□□ 0.14
SNF8-213ENST00000514929 RIGQ13278 110 aa15.92■□□□□ 0.14
SNF8-213ENST00000514929 SCXQ7RTU7 201 aa15.92■□□□□ 0.14
SNF8-213ENST00000514929 NAT8Q9UHE5 227 aa15.92■□□□□ 0.14
SNF8-213ENST00000514929 SRSF3P84103 164 aaKnown RBP15.91■□□□□ 0.14
SNF8-213ENST00000514929 DGAT2L7PQ6IED9 249 aa15.91■□□□□ 0.14
SNF8-213ENST00000514929 NUP35Q8NFH5 326 aa15.91■□□□□ 0.14
SNF8-213ENST00000514929 ST20Q9HBF5 79 aa15.91■□□□□ 0.14
SNF8-213ENST00000514929 VPS13BQ7Z7G8 4022 aa15.9■□□□□ 0.14
SNF8-213ENST00000514929 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.9■□□□□ 0.14
SNF8-213ENST00000514929 IGKV2-29A2NJV5 120 aaPredicted RBP15.9■□□□□ 0.14
SNF8-213ENST00000514929 GAS8-AS1O95177 125 aa15.9■□□□□ 0.14
SNF8-213ENST00000514929 RNASEKQ6P5S7 137 aaKnown RBP15.9■□□□□ 0.14
SNF8-213ENST00000514929 LINC00528Q8N1L1 170 aa15.9■□□□□ 0.14
SNF8-213ENST00000514929 CLRN3Q8NCR9 226 aa15.9■□□□□ 0.14
SNF8-213ENST00000514929 CHAC1Q9BUX1 264 aa15.9■□□□□ 0.14
SNF8-213ENST00000514929 IGKV3OR2-268A0A0C4DH90 116 aa15.89■□□□□ 0.13
SNF8-213ENST00000514929 H7C423 109 aa15.89■□□□□ 0.13
SNF8-213ENST00000514929 RAB4AP20338 218 aa15.89■□□□□ 0.13
SNF8-213ENST00000514929 AMN1Q8IY45 258 aa15.89■□□□□ 0.13
SNF8-213ENST00000514929 MRAP2Q96G30 205 aa15.89■□□□□ 0.13
SNF8-213ENST00000514929 RNF185Q96GF1 192 aa15.89■□□□□ 0.13
SNF8-213ENST00000514929 SMDT1Q9H4I9 107 aa15.89■□□□□ 0.13
SNF8-213ENST00000514929 NAT8BQ9UHF3 227 aa15.89■□□□□ 0.13
SNF8-213ENST00000514929 SRRM2Q9UQ35 2752 aaKnown RBP15.88■□□□□ 0.13
SNF8-213ENST00000514929 PLA2G1BP04054 148 aaKnown RBP15.87■□□□□ 0.13
SNF8-213ENST00000514929 FGF6P10767 208 aa15.87■□□□□ 0.13
SNF8-213ENST00000514929 hDV102S1A0JD36 115 aa15.86■□□□□ 0.13
SNF8-213ENST00000514929 RPS10P46783 165 aaKnown RBP15.86■□□□□ 0.13
SNF8-213ENST00000514929 C9orf163Q8N9P6 203 aa15.86■□□□□ 0.13
SNF8-213ENST00000514929 CIRBP-AS1Q8TBR5 109 aa15.85■□□□□ 0.13
SNF8-213ENST00000514929 TMEM242Q9NWH2 141 aa15.85■□□□□ 0.13
SNF8-213ENST00000514929 GAGE12HA6NDE8 117 aa15.84■□□□□ 0.13
SNF8-213ENST00000514929 TSHBP01222 138 aa15.84■□□□□ 0.13
SNF8-213ENST00000514929 ZNF25P17030 456 aaPredicted RBP15.84■□□□□ 0.13
SNF8-213ENST00000514929 BTF3L4Q96K17 158 aa15.84■□□□□ 0.13
SNF8-213ENST00000514929 SMIM27A0A1W2PRY6 76 aa15.83■□□□□ 0.12
SNF8-213ENST00000514929 SMKR1H3BMG3 65 aa15.83■□□□□ 0.12
SNF8-213ENST00000514929 POLR2KP53803 58 aaKnown RBP15.83■□□□□ 0.12
SNF8-213ENST00000514929 TMEM101Q96IK0 257 aa15.83■□□□□ 0.12
SNF8-213ENST00000514929 AP5S1Q9NUS5 200 aa15.83■□□□□ 0.12
SNF8-213ENST00000514929 ESDP10768 282 aa15.82■□□□□ 0.12
SNF8-213ENST00000514929 TRBV27A0A0K0K1C4 114 aa15.81■□□□□ 0.12
SNF8-213ENST00000514929 PPP1R17O96001 155 aa15.81■□□□□ 0.12
SNF8-213ENST00000514929 CAMPP49913 170 aa15.8■□□□□ 0.12
SNF8-213ENST00000514929 CNBPP62633 177 aaKnown RBP15.8■□□□□ 0.12
SNF8-213ENST00000514929 CHCHD10Q8WYQ3 142 aaPredicted RBP15.8■□□□□ 0.12
SNF8-213ENST00000514929 VCYO14598 125 aa15.79■□□□□ 0.12
SNF8-213ENST00000514929 CFAP161Q6P656 301 aa15.79■□□□□ 0.12
SNF8-213ENST00000514929 OR5A1Q8NGJ0 315 aa15.79■□□□□ 0.12
SNF8-213ENST00000514929 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.78■□□□□ 0.12
SNF8-213ENST00000514929 FCER1GP30273 86 aa15.78■□□□□ 0.12
SNF8-213ENST00000514929 FAM104BQ5XKR9 115 aa15.78■□□□□ 0.12
SNF8-213ENST00000514929 NRACQ8N912 160 aa15.78■□□□□ 0.12
SNF8-213ENST00000514929 A0A1B0GW15 77 aa15.77■□□□□ 0.12
SNF8-213ENST00000514929 C7orf77A4D0Y5 90 aa15.77■□□□□ 0.12
SNF8-213ENST00000514929 SUMO2P61956 95 aaKnown RBP15.77■□□□□ 0.12
SNF8-213ENST00000514929 MRPL51Q4U2R6 128 aaKnown RBP15.77■□□□□ 0.12
SNF8-213ENST00000514929 SDIM1Q6ZPB5 146 aa15.76■□□□□ 0.11
SNF8-213ENST00000514929 C15orf56Q8N910 161 aa15.76■□□□□ 0.11
SNF8-213ENST00000514929 PPP1R2P9O14990 202 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms