RNA–Protein interactions for RNA: ENST00000514831.1

SMAD1-214, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-214ENST00000514831 PRSS3P2Q8NHM4 247 aa14.31□□□□□ -0.12
SMAD1-214ENST00000514831 FAM213BQ8TBF2 198 aa14.31□□□□□ -0.12
SMAD1-214ENST00000514831 AMTP48728 403 aa14.3□□□□□ -0.12
SMAD1-214ENST00000514831 STPG4Q8N801 248 aa14.3□□□□□ -0.12
SMAD1-214ENST00000514831 NIT2Q9NQR4 276 aa14.3□□□□□ -0.12
SMAD1-214ENST00000514831 UMAD1C9J7I0 102 aa14.29□□□□□ -0.12
SMAD1-214ENST00000514831 RPS20P60866 119 aaKnown RBP14.29□□□□□ -0.12
SMAD1-214ENST00000514831 COTL1Q14019 142 aa14.29□□□□□ -0.12
SMAD1-214ENST00000514831 HIGD2BQ4VC39 106 aa14.29□□□□□ -0.12
SMAD1-214ENST00000514831 KCNRGQ8N5I3 272 aa14.29□□□□□ -0.12
SMAD1-214ENST00000514831 OR2D3Q8NGH3 330 aa14.28□□□□□ -0.12
SMAD1-214ENST00000514831 GVQW2A0A096LPI5 108 aaPredicted RBP14.27□□□□□ -0.13
SMAD1-214ENST00000514831 TRGC1P0CF51 173 aa14.27□□□□□ -0.13
SMAD1-214ENST00000514831 C11orf52Q96A22 123 aa14.27□□□□□ -0.13
SMAD1-214ENST00000514831 KRTAP10-8P60410 259 aa14.26□□□□□ -0.13
SMAD1-214ENST00000514831 SPINK6Q6UWN8 80 aa14.26□□□□□ -0.13
SMAD1-214ENST00000514831 A0A096LNI7 61 aa14.25□□□□□ -0.13
SMAD1-214ENST00000514831 IGKV3OR2-268A0A0C4DH90 116 aa14.25□□□□□ -0.13
SMAD1-214ENST00000514831 C19orf71A6NCJ1 209 aa14.25□□□□□ -0.13
SMAD1-214ENST00000514831 F2Z2F3 143 aa14.25□□□□□ -0.13
SMAD1-214ENST00000514831 CENPWQ5EE01 88 aa14.25□□□□□ -0.13
SMAD1-214ENST00000514831 REG3GQ6UW15 175 aa14.25□□□□□ -0.13
SMAD1-214ENST00000514831 LYPD6BQ8NI32 183 aa14.25□□□□□ -0.13
SMAD1-214ENST00000514831 CHCHD10Q8WYQ3 142 aaPredicted RBP14.24□□□□□ -0.13
SMAD1-214ENST00000514831 XKRY2A2RUG3 117 aa14.23□□□□□ -0.13
SMAD1-214ENST00000514831 H2AFB1P0C5Y9 115 aa14.23□□□□□ -0.13
SMAD1-214ENST00000514831 ZNF345Q14585 488 aa14.23□□□□□ -0.13
SMAD1-214ENST00000514831 LINC00474Q9P2X8 69 aa14.23□□□□□ -0.13
SMAD1-214ENST00000514831 SMIM12Q96EX1 92 aa14.22□□□□□ -0.13
SMAD1-214ENST00000514831 MANBALQ9NQG1 85 aa14.22□□□□□ -0.13
SMAD1-214ENST00000514831 LYZL1Q6UWQ5 148 aa14.21□□□□□ -0.13
SMAD1-214ENST00000514831 PKIGQ9Y2B9 76 aa14.21□□□□□ -0.13
SMAD1-214ENST00000514831 NTF3P20783 257 aa14.2□□□□□ -0.14
SMAD1-214ENST00000514831 AMMECR1LQ6DCA0 310 aa14.2□□□□□ -0.14
SMAD1-214ENST00000514831 CTRLP40313 264 aa14.19□□□□□ -0.14
SMAD1-214ENST00000514831 H7C423 109 aa14.18□□□□□ -0.14
SMAD1-214ENST00000514831 NCR2O95944 276 aa14.18□□□□□ -0.14
SMAD1-214ENST00000514831 IFNA1P01562 189 aa14.18□□□□□ -0.14
SMAD1-214ENST00000514831 FOXI1Q12951 378 aa14.18□□□□□ -0.14
SMAD1-214ENST00000514831 SRSF9Q13242 221 aaKnown RBP eCLIP14.18□□□□□ -0.14
SMAD1-214ENST00000514831 Q6ZNX1 250 aa14.18□□□□□ -0.14
SMAD1-214ENST00000514831 GNG13Q9P2W3 67 aa14.18□□□□□ -0.14
SMAD1-214ENST00000514831 SMLR1H3BR10 107 aa14.17□□□□□ -0.14
SMAD1-214ENST00000514831 GNG4P50150 75 aa14.17□□□□□ -0.14
SMAD1-214ENST00000514831 CCL20P78556 96 aa14.17□□□□□ -0.14
SMAD1-214ENST00000514831 Q6ZRP5 223 aa14.17□□□□□ -0.14
SMAD1-214ENST00000514831 C9orf62Q8N4C0 152 aa14.17□□□□□ -0.14
SMAD1-214ENST00000514831 GATD1Q8NB37 220 aa14.17□□□□□ -0.14
SMAD1-214ENST00000514831 CNFNQ9BYD5 112 aa14.17□□□□□ -0.14
SMAD1-214ENST00000514831 RNASEKQ6P5S7 137 aaKnown RBP14.16□□□□□ -0.14
SMAD1-214ENST00000514831 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.15□□□□□ -0.14
SMAD1-214ENST00000514831 TRAV26-2A0A0B4J265 109 aa14.15□□□□□ -0.14
SMAD1-214ENST00000514831 IGKV2-29A2NJV5 120 aaPredicted RBP14.15□□□□□ -0.14
SMAD1-214ENST00000514831 RAB19A4D1S5 217 aa14.15□□□□□ -0.14
SMAD1-214ENST00000514831 FGF6P10767 208 aa14.15□□□□□ -0.14
SMAD1-214ENST00000514831 BCL2L11O43521 198 aa14.14□□□□□ -0.15
SMAD1-214ENST00000514831 GAS8-AS1O95177 125 aa14.14□□□□□ -0.15
SMAD1-214ENST00000514831 APCSP02743 223 aa14.14□□□□□ -0.15
SMAD1-214ENST00000514831 OR5A1Q8NGJ0 315 aa14.14□□□□□ -0.15
SMAD1-214ENST00000514831 CARD19Q96LW7 228 aa14.14□□□□□ -0.15
SMAD1-214ENST00000514831 TRBV20OR9-2A0A075B6H5 130 aa14.13□□□□□ -0.15
SMAD1-214ENST00000514831 TRAV1-1A0A0B4J248 108 aa14.13□□□□□ -0.15
SMAD1-214ENST00000514831 ZNF25P17030 456 aaPredicted RBP14.13□□□□□ -0.15
SMAD1-214ENST00000514831 TWIST1Q15672 202 aa14.13□□□□□ -0.15
SMAD1-214ENST00000514831 BIN3Q9NQY0 253 aa14.13□□□□□ -0.15
SMAD1-214ENST00000514831 IGHV1-58A0A0C4DH39 117 aa14.12□□□□□ -0.15
SMAD1-214ENST00000514831 KANTRA0A1W2PQU2 76 aa14.12□□□□□ -0.15
SMAD1-214ENST00000514831 RPL39LQ96EH5 51 aaKnown RBP14.12□□□□□ -0.15
SMAD1-214ENST00000514831 HMSDA8MTL9 139 aa14.11□□□□□ -0.15
SMAD1-214ENST00000514831 XCL1P47992 114 aa14.11□□□□□ -0.15
SMAD1-214ENST00000514831 EIF5AP63241 154 aaKnown RBP14.11□□□□□ -0.15
SMAD1-214ENST00000514831 LINC00526Q96FQ7 95 aa14.11□□□□□ -0.15
SMAD1-214ENST00000514831 LINC00959A0A1B0GUT2 108 aa14.09□□□□□ -0.15
SMAD1-214ENST00000514831 CCL25O15444 150 aa14.09□□□□□ -0.15
SMAD1-214ENST00000514831 PDE6DO43924 150 aa14.09□□□□□ -0.15
SMAD1-214ENST00000514831 MEF2BQ02080 365 aaPredicted RBP14.09□□□□□ -0.15
SMAD1-214ENST00000514831 NUDT10Q8NFP7 164 aa14.09□□□□□ -0.15
SMAD1-214ENST00000514831 NUDT11Q96G61 164 aa14.09□□□□□ -0.15
SMAD1-214ENST00000514831 SDHAF1A6NFY7 115 aa14.08□□□□□ -0.16
SMAD1-214ENST00000514831 PTTG1IPP53801 180 aa14.07□□□□□ -0.16
SMAD1-214ENST00000514831 SYCNQ0VAF6 134 aa14.07□□□□□ -0.16
SMAD1-214ENST00000514831 TEX261Q6UWH6 196 aa14.07□□□□□ -0.16
SMAD1-214ENST00000514831 BTF3L4Q96K17 158 aa14.07□□□□□ -0.16
SMAD1-214ENST00000514831 BATF3Q9NR55 127 aa14.07□□□□□ -0.16
SMAD1-214ENST00000514831 TMEM101Q96IK0 257 aa14.06□□□□□ -0.16
SMAD1-214ENST00000514831 RPP21Q9H633 154 aaKnown RBP14.06□□□□□ -0.16
SMAD1-214ENST00000514831 MED9Q9NWA0 146 aa14.06□□□□□ -0.16
SMAD1-214ENST00000514831 FAM231BA6NCW3 169 aa14.05□□□□□ -0.16
SMAD1-214ENST00000514831 TEX46H3BTG2 121 aa14.05□□□□□ -0.16
SMAD1-214ENST00000514831 ZNF561-AS1K7EIQ3 104 aa14.05□□□□□ -0.16
SMAD1-214ENST00000514831 I3L3M4 83 aa14.04□□□□□ -0.16
SMAD1-214ENST00000514831 SMIM15Q7Z3B0 74 aa14.04□□□□□ -0.16
SMAD1-214ENST00000514831 LOC107984640A0A0U1RRK4 108 aa14.03□□□□□ -0.16
SMAD1-214ENST00000514831 ESDP10768 282 aa14.03□□□□□ -0.16
SMAD1-214ENST00000514831 CAMPP49913 170 aa14.03□□□□□ -0.16
SMAD1-214ENST00000514831 RGS21Q2M5E4 152 aa14.03□□□□□ -0.16
SMAD1-214ENST00000514831 CD164L2Q6UWJ8 174 aa14.03□□□□□ -0.16
SMAD1-214ENST00000514831 TRBV6-5A0A0K0K1A5 114 aa14.02□□□□□ -0.17
SMAD1-214ENST00000514831 PMCHP20382 165 aa14.02□□□□□ -0.17
SMAD1-214ENST00000514831 FOXA3P55318 350 aaPredicted RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms