RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 IGHV3-16A0A0C4DH30 117 aa9.3□□□□□ -0.92
SDHA-216ENST00000514027 DEFB136Q30KP8 78 aa9.3□□□□□ -0.92
SDHA-216ENST00000514027 MXRA5Q9NR99 2828 aa9.3□□□□□ -0.92
SDHA-216ENST00000514027 LRRK2Q5S007 2527 aa9.3□□□□□ -0.92
SDHA-216ENST00000514027 EMP1P54849 157 aa9.29□□□□□ -0.92
SDHA-216ENST00000514027 RPL39P62891 51 aaKnown RBP9.29□□□□□ -0.92
SDHA-216ENST00000514027 C9orf153Q5TBE3 101 aa9.29□□□□□ -0.92
SDHA-216ENST00000514027 POM121L12Q8N7R1 296 aa9.29□□□□□ -0.92
SDHA-216ENST00000514027 ZNF256Q9Y2P7 627 aaPredicted RBP9.29□□□□□ -0.92
SDHA-216ENST00000514027 TRBV7-7A0A0K0K1E9 115 aa9.29□□□□□ -0.92
SDHA-216ENST00000514027 TEX49A0A1B0GTD5 131 aa9.29□□□□□ -0.92
SDHA-216ENST00000514027 IGHV4-31P0DP07 118 aa9.29□□□□□ -0.92
SDHA-216ENST00000514027 HTN1P15515 57 aa9.29□□□□□ -0.92
SDHA-216ENST00000514027 Q6YL49 198 aa9.29□□□□□ -0.92
SDHA-216ENST00000514027 TRPT1Q86TN4 253 aaKnown RBP9.29□□□□□ -0.92
SDHA-216ENST00000514027 PRADC1Q9BSG0 188 aa9.29□□□□□ -0.92
SDHA-216ENST00000514027 IGHV1OR15-1A0A075B7D0 117 aa9.28□□□□□ -0.92
SDHA-216ENST00000514027 SDHAF1A6NFY7 115 aa9.28□□□□□ -0.92
SDHA-216ENST00000514027 ELANEP08246 267 aa9.28□□□□□ -0.92
SDHA-216ENST00000514027 KRTAP10-9P60411 292 aa9.28□□□□□ -0.92
SDHA-216ENST00000514027 HERVK_113P63121 156 aa9.28□□□□□ -0.92
SDHA-216ENST00000514027 C18orf65Q6ZTR6 163 aa9.28□□□□□ -0.92
SDHA-216ENST00000514027 C9orf85Q96MD7 179 aa9.28□□□□□ -0.92
SDHA-216ENST00000514027 LGALS9O00182 355 aa9.28□□□□□ -0.92
SDHA-216ENST00000514027 CFC1BP0CG36 223 aa9.28□□□□□ -0.92
SDHA-216ENST00000514027 CFC1P0CG37 223 aa9.28□□□□□ -0.92
SDHA-216ENST00000514027 SLURP1P55000 103 aa9.28□□□□□ -0.92
SDHA-216ENST00000514027 KHDC1LQ5JSQ8 128 aa9.28□□□□□ -0.92
SDHA-216ENST00000514027 OR13C6PQ8NH95 151 aa9.28□□□□□ -0.92
SDHA-216ENST00000514027 SORL1Q92673 2214 aa9.27□□□□□ -0.92
SDHA-216ENST00000514027 A8MZ25 164 aa9.27□□□□□ -0.93
SDHA-216ENST00000514027 VCYO14598 125 aa9.27□□□□□ -0.93
SDHA-216ENST00000514027 POLR2KP53803 58 aaKnown RBP9.27□□□□□ -0.93
SDHA-216ENST00000514027 C3orf22Q8N5N4 141 aa9.27□□□□□ -0.93
SDHA-216ENST00000514027 TMEM101Q96IK0 257 aa9.27□□□□□ -0.93
SDHA-216ENST00000514027 UBE2E2Q96LR5 201 aa9.27□□□□□ -0.93
SDHA-216ENST00000514027 KNCNA6PVL3 124 aa9.27□□□□□ -0.93
SDHA-216ENST00000514027 LINC01600Q96MT4 127 aa9.27□□□□□ -0.93
SDHA-216ENST00000514027 DUX3Q96PT4 197 aa9.27□□□□□ -0.93
SDHA-216ENST00000514027 CR1P17927 2039 aa9.27□□□□□ -0.93
SDHA-216ENST00000514027 EPG5Q9HCE0 2579 aa9.26□□□□□ -0.93
SDHA-216ENST00000514027 H3BMM0 161 aa9.26□□□□□ -0.93
SDHA-216ENST00000514027 ZNF561-AS1K7EIQ3 104 aa9.26□□□□□ -0.93
SDHA-216ENST00000514027 TSHBP01222 138 aa9.26□□□□□ -0.93
SDHA-216ENST00000514027 UBE2WQ96B02 151 aa9.26□□□□□ -0.93
SDHA-216ENST00000514027 PRO1854Q9UHT4 67 aa9.26□□□□□ -0.93
SDHA-216ENST00000514027 ABCA12Q86UK0 2595 aa9.26□□□□□ -0.93
SDHA-216ENST00000514027 FAM236AA0A1B0GUQ0 79 aa9.25□□□□□ -0.93
SDHA-216ENST00000514027 FAM236BA0A1B0GV22 79 aa9.25□□□□□ -0.93
SDHA-216ENST00000514027 CRYGDP07320 174 aa9.25□□□□□ -0.93
SDHA-216ENST00000514027 ZNF876PQ49A33 203 aa9.25□□□□□ -0.93
SDHA-216ENST00000514027 HIST2H2BDQ6DRA6 164 aa9.25□□□□□ -0.93
SDHA-216ENST00000514027 EDA2RQ9HAV5 297 aa9.25□□□□□ -0.93
SDHA-216ENST00000514027 C11orf86A6NJI1 115 aa9.25□□□□□ -0.93
SDHA-216ENST00000514027 FSHBP01225 129 aa9.25□□□□□ -0.93
SDHA-216ENST00000514027 UBR5O95071 2799 aaPredicted RBP9.24□□□□□ -0.93
SDHA-216ENST00000514027 FAM240AA0A1B0GVK7 77 aa9.24□□□□□ -0.93
SDHA-216ENST00000514027 IGIPA6NJ69 53 aa9.24□□□□□ -0.93
SDHA-216ENST00000514027 IGHV3-30P01768 117 aa9.24□□□□□ -0.93
SDHA-216ENST00000514027 IGHV3-30-5P0DP03 117 aa9.24□□□□□ -0.93
SDHA-216ENST00000514027 DEFB131AP59861 70 aa9.24□□□□□ -0.93
SDHA-216ENST00000514027 PMVKQ15126 192 aa9.24□□□□□ -0.93
SDHA-216ENST00000514027 ZNF843Q8N446 348 aa9.24□□□□□ -0.93
SDHA-216ENST00000514027 PTPN13Q12923 2485 aa9.24□□□□□ -0.93
SDHA-216ENST00000514027 TEX15Q9BXT5 2789 aa9.24□□□□□ -0.93
SDHA-216ENST00000514027 IGLV4-69A0A075B6H9 119 aa9.24□□□□□ -0.93
SDHA-216ENST00000514027 A0A0J9YY99 117 aa9.24□□□□□ -0.93
SDHA-216ENST00000514027 UQCRQO14949 82 aa9.24□□□□□ -0.93
SDHA-216ENST00000514027 P0DMU3 169 aa9.24□□□□□ -0.93
SDHA-216ENST00000514027 FAM231AP0DMU4 169 aa9.24□□□□□ -0.93
SDHA-216ENST00000514027 FAM231CP0DMU5 169 aa9.24□□□□□ -0.93
SDHA-216ENST00000514027 LINC01620Q4KN68 170 aa9.24□□□□□ -0.93
SDHA-216ENST00000514027 Q96MF0 132 aa9.24□□□□□ -0.93
SDHA-216ENST00000514027 KLK5Q9Y337 293 aaPredicted RBP9.24□□□□□ -0.93
SDHA-216ENST00000514027 TRGV11A0A075B6L2 103 aa9.23□□□□□ -0.93
SDHA-216ENST00000514027 IGHV3-73A0A0B4J1V6 119 aa9.23□□□□□ -0.93
SDHA-216ENST00000514027 TRBV27A0A0K0K1C4 114 aa9.23□□□□□ -0.93
SDHA-216ENST00000514027 M0QY20 66 aa9.23□□□□□ -0.93
SDHA-216ENST00000514027 ATXN8Q156A1 80 aa9.23□□□□□ -0.93
SDHA-216ENST00000514027 KLHL30-AS1Q8NEE0 82 aa9.23□□□□□ -0.93
SDHA-216ENST00000514027 NAV2Q8IVL1 2488 aa9.23□□□□□ -0.93
SDHA-216ENST00000514027 RBMY1A1P0DJD3 496 aaKnown RBP9.23□□□□□ -0.93
SDHA-216ENST00000514027 RBMY1CP0DJD4 496 aa9.23□□□□□ -0.93
SDHA-216ENST00000514027 RPS28P62857 69 aaKnown RBP9.23□□□□□ -0.93
SDHA-216ENST00000514027 RBMY1FQ15415 496 aaKnown RBP9.23□□□□□ -0.93
SDHA-216ENST00000514027 DEFB113Q30KQ7 82 aa9.23□□□□□ -0.93
SDHA-216ENST00000514027 TMEM170BQ5T4T1 132 aa9.23□□□□□ -0.93
SDHA-216ENST00000514027 LINC00526Q96FQ7 95 aa9.23□□□□□ -0.93
SDHA-216ENST00000514027 CREBBPQ92793 2442 aa9.23□□□□□ -0.93
SDHA-216ENST00000514027 TRBV6-5A0A0K0K1A5 114 aa9.22□□□□□ -0.93
SDHA-216ENST00000514027 TRBV10-2A0A0K0K1G8 114 aa9.22□□□□□ -0.93
SDHA-216ENST00000514027 PRM2P04554 102 aa9.22□□□□□ -0.93
SDHA-216ENST00000514027 HERVK_113P61574 105 aa9.22□□□□□ -0.93
SDHA-216ENST00000514027 C4orf48Q5BLP8 95 aa9.22□□□□□ -0.93
SDHA-216ENST00000514027 TMEM141Q96I45 108 aa9.22□□□□□ -0.93
SDHA-216ENST00000514027 TIMM17AQ99595 171 aa9.22□□□□□ -0.93
SDHA-216ENST00000514027 F5H768 121 aa9.21□□□□□ -0.93
SDHA-216ENST00000514027 OPRPNQ99935 248 aaPredicted RBP9.21□□□□□ -0.93
SDHA-216ENST00000514027 A0A1W2PRX2 142 aa9.21□□□□□ -0.94
SDHA-216ENST00000514027 PAPPA-AS1Q5QFB9 102 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 209.6 ms