RNA–Protein interactions for RNA: ENST00000513557.5

GYPB-214, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 277 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-214ENST00000513557 HIST1H2BLQ99880 126 aa2.28□□□□□ -2.04
GYPB-214ENST00000513557 VPS25Q9BRG1 176 aa2.28□□□□□ -2.04
GYPB-214ENST00000513557 GINS4Q9BRT9 223 aa2.28□□□□□ -2.04
GYPB-214ENST00000513557 DUSP21Q9H596 190 aa2.28□□□□□ -2.04
GYPB-214ENST00000513557 TAF9BQ9HBM6 251 aa2.28□□□□□ -2.04
GYPB-214ENST00000513557 ABRACLQ9P1F3 81 aa2.28□□□□□ -2.04
GYPB-214ENST00000513557 RBM7Q9Y580 266 aaKnown RBP2.28□□□□□ -2.04
GYPB-214ENST00000513557 COL7A1Q02388 2944 aa2.27□□□□□ -2.05
GYPB-214ENST00000513557 GABARAPH6UMI1 98 aa2.27□□□□□ -2.05
GYPB-214ENST00000513557 K7EP13 123 aa2.27□□□□□ -2.05
GYPB-214ENST00000513557 CST7O76096 145 aa2.27□□□□□ -2.05
GYPB-214ENST00000513557 DPM2O94777 84 aa2.27□□□□□ -2.05
GYPB-214ENST00000513557 P0DMU3 169 aa2.27□□□□□ -2.05
GYPB-214ENST00000513557 FAM231AP0DMU4 169 aa2.27□□□□□ -2.05
GYPB-214ENST00000513557 FAM231CP0DMU5 169 aa2.27□□□□□ -2.05
GYPB-214ENST00000513557 AQP4P55087 323 aa2.27□□□□□ -2.05
GYPB-214ENST00000513557 INSL4Q14641 139 aa2.27□□□□□ -2.05
GYPB-214ENST00000513557 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.27□□□□□ -2.05
GYPB-214ENST00000513557 UNQ5815/PRO19632Q6UWF5 114 aa2.27□□□□□ -2.05
GYPB-214ENST00000513557 C6orf201Q7Z4U5 140 aa2.27□□□□□ -2.05
GYPB-214ENST00000513557 LHFPL1Q86WI0 220 aa2.27□□□□□ -2.05
GYPB-214ENST00000513557 BPIFA4PQ86YQ2 179 aa2.27□□□□□ -2.05
GYPB-214ENST00000513557 SBSPONQ8IVN8 264 aa2.27□□□□□ -2.05
GYPB-214ENST00000513557 TCTE3Q8IZS6 198 aa2.27□□□□□ -2.05
GYPB-214ENST00000513557 RPP25LQ8N5L8 163 aaKnown RBP2.27□□□□□ -2.05
GYPB-214ENST00000513557 Q8NAQ8 132 aa2.27□□□□□ -2.05
GYPB-214ENST00000513557 COA4Q9NYJ1 87 aa2.27□□□□□ -2.05
GYPB-214ENST00000513557 METTL1Q9UBP6 276 aaKnown RBP2.27□□□□□ -2.05
GYPB-214ENST00000513557 EPDR1Q9UM22 224 aa2.27□□□□□ -2.05
GYPB-214ENST00000513557 H7BYZ3 331 aa2.26□□□□□ -2.05
GYPB-214ENST00000513557 J3QRE1 110 aa2.26□□□□□ -2.05
GYPB-214ENST00000513557 TMEM256-PLSCR3K7ERE1 68 aa2.26□□□□□ -2.05
GYPB-214ENST00000513557 SYNGR2O43760 224 aa2.26□□□□□ -2.05
GYPB-214ENST00000513557 PRH1P02810 166 aa2.26□□□□□ -2.05
GYPB-214ENST00000513557 SAA2P0DJI9 122 aaPredicted RBP2.26□□□□□ -2.05
GYPB-214ENST00000513557 EVI2AP22794 236 aa2.26□□□□□ -2.05
GYPB-214ENST00000513557 INSL3P51460 131 aa2.26□□□□□ -2.05
GYPB-214ENST00000513557 MPV17LQ2QL34 196 aa2.26□□□□□ -2.05
GYPB-214ENST00000513557 HRCT1Q6UXD1 115 aa2.26□□□□□ -2.05
GYPB-214ENST00000513557 IDO2Q6ZQW0 420 aa2.26□□□□□ -2.05
GYPB-214ENST00000513557 C4orf3Q8WVX3 66 aa2.26□□□□□ -2.05
GYPB-214ENST00000513557 NABP2Q9BQ15 211 aa2.26□□□□□ -2.05
GYPB-214ENST00000513557 NAT8Q9UHE5 227 aa2.26□□□□□ -2.05
GYPB-214ENST00000513557 NAT8BQ9UHF3 227 aa2.26□□□□□ -2.05
GYPB-214ENST00000513557 TIMM9Q9Y5J7 89 aa2.26□□□□□ -2.05
GYPB-214ENST00000513557 A0A0D9SG52 128 aa2.25□□□□□ -2.05
GYPB-214ENST00000513557 TRBV7-6A0A0J9YX20 115 aa2.25□□□□□ -2.05
GYPB-214ENST00000513557 C7orf71A4D174 169 aa2.25□□□□□ -2.05
GYPB-214ENST00000513557 C9JAW5 83 aa2.25□□□□□ -2.05
GYPB-214ENST00000513557 C3orf84H3BNL1 204 aa2.25□□□□□ -2.05
GYPB-214ENST00000513557 SDC2P34741 201 aa2.25□□□□□ -2.05
GYPB-214ENST00000513557 FXYD3Q14802 87 aa2.25□□□□□ -2.05
GYPB-214ENST00000513557 VMA21Q3ZAQ7 101 aa2.25□□□□□ -2.05
GYPB-214ENST00000513557 FAM229BQ4G0N7 80 aa2.25□□□□□ -2.05
GYPB-214ENST00000513557 HSD17B12Q53GQ0 312 aa2.25□□□□□ -2.05
GYPB-214ENST00000513557 AMMECR1LQ6DCA0 310 aa2.25□□□□□ -2.05
GYPB-214ENST00000513557 LYZL1Q6UWQ5 148 aa2.25□□□□□ -2.05
GYPB-214ENST00000513557 DPPA3Q6W0C5 159 aa2.25□□□□□ -2.05
GYPB-214ENST00000513557 C8orf59Q8N0T1 100 aaPredicted RBP2.25□□□□□ -2.05
GYPB-214ENST00000513557 Q8N6K4 173 aa2.25□□□□□ -2.05
GYPB-214ENST00000513557 DYNLRB2Q8TF09 96 aa2.25□□□□□ -2.05
GYPB-214ENST00000513557 DCANP1Q8TF63 244 aa2.25□□□□□ -2.05
GYPB-214ENST00000513557 ARHGAP5-AS1Q96IT6 56 aa2.25□□□□□ -2.05
GYPB-214ENST00000513557 CARD19Q96LW7 228 aa2.25□□□□□ -2.05
GYPB-214ENST00000513557 IMMP2LQ96T52 175 aa2.25□□□□□ -2.05
GYPB-214ENST00000513557 HIGD2AQ9BW72 106 aa2.25□□□□□ -2.05
GYPB-214ENST00000513557 ZNF471Q9BX82 626 aaPredicted RBP2.25□□□□□ -2.05
GYPB-214ENST00000513557 MRPL32Q9BYC8 188 aaKnown RBP2.25□□□□□ -2.05
GYPB-214ENST00000513557 CST11Q9H112 138 aa2.25□□□□□ -2.05
GYPB-214ENST00000513557 OTORQ9NRC9 128 aa2.25□□□□□ -2.05
GYPB-214ENST00000513557 HIGD1AQ9Y241 93 aa2.25□□□□□ -2.05
GYPB-214ENST00000513557 TENM2Q9NT68 2774 aa2.25□□□□□ -2.05
GYPB-214ENST00000513557 IGKV3-7A0A075B6H7 116 aa2.24□□□□□ -2.05
GYPB-214ENST00000513557 IGHV1-58A0A0C4DH39 117 aa2.24□□□□□ -2.05
GYPB-214ENST00000513557 H3BT86 120 aa2.24□□□□□ -2.05
GYPB-214ENST00000513557 GNRH2O43555 120 aa2.24□□□□□ -2.05
GYPB-214ENST00000513557 HIST1H2BKO60814 126 aa2.24□□□□□ -2.05
GYPB-214ENST00000513557 IGKV1-16P04430 117 aa2.24□□□□□ -2.05
GYPB-214ENST00000513557 IFNA4P05014 189 aa2.24□□□□□ -2.05
GYPB-214ENST00000513557 HIST1H2BJP06899 126 aa2.24□□□□□ -2.05
GYPB-214ENST00000513557 ZNF22P17026 224 aaPredicted RBP2.24□□□□□ -2.05
GYPB-214ENST00000513557 RNASE4P34096 147 aaKnown RBP2.24□□□□□ -2.05
GYPB-214ENST00000513557 RPL35P42766 123 aaKnown RBP2.24□□□□□ -2.05
GYPB-214ENST00000513557 RPL28P46779 137 aaKnown RBP2.24□□□□□ -2.05
GYPB-214ENST00000513557 EIF2B2P49770 351 aaKnown RBP2.24□□□□□ -2.05
GYPB-214ENST00000513557 FXYD2P54710 66 aa2.24□□□□□ -2.05
GYPB-214ENST00000513557 RPS25P62851 125 aaKnown RBP2.24□□□□□ -2.05
GYPB-214ENST00000513557 RHOGP84095 191 aa2.24□□□□□ -2.05
GYPB-214ENST00000513557 MSMO1Q15800 293 aa2.24□□□□□ -2.05
GYPB-214ENST00000513557 NDUFA5Q16718 116 aa2.24□□□□□ -2.05
GYPB-214ENST00000513557 KHDC3LQ587J8 217 aa2.24□□□□□ -2.05
GYPB-214ENST00000513557 IGFL1Q6UW32 110 aa2.24□□□□□ -2.05
GYPB-214ENST00000513557 ZNF833PQ6ZTB9 187 aa2.24□□□□□ -2.05
GYPB-214ENST00000513557 PHF5AQ7RTV0 110 aaKnown RBP2.24□□□□□ -2.05
GYPB-214ENST00000513557 LINC00311Q8N616 119 aa2.24□□□□□ -2.05
GYPB-214ENST00000513557 WFDC10AQ9H1F0 79 aa2.24□□□□□ -2.05
GYPB-214ENST00000513557 ATG5Q9H1Y0 275 aa2.24□□□□□ -2.05
GYPB-214ENST00000513557 NHP2Q9NX24 153 aaKnown RBP2.24□□□□□ -2.05
GYPB-214ENST00000513557 SCN3BQ9NY72 215 aa2.24□□□□□ -2.05
GYPB-214ENST00000513557 U3KQ87 197 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms