RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 NUBP2Q9Y5Y2 271 aa-0.49□□□□□ -2.49
PDGFC-208ENST00000512711 MYH1P12882 1939 aa-0.49□□□□□ -2.49
PDGFC-208ENST00000512711 PPIP5K1Q6PFW1 1433 aa-0.49□□□□□ -2.49
PDGFC-208ENST00000512711 TRAPPC8Q9Y2L5 1435 aa-0.49□□□□□ -2.49
PDGFC-208ENST00000512711 ATP10BO94823 1461 aa-0.49□□□□□ -2.49
PDGFC-208ENST00000512711 MAGI2Q86UL8 1455 aa-0.49□□□□□ -2.49
PDGFC-208ENST00000512711 FYCO1Q9BQS8 1478 aa-0.49□□□□□ -2.49
PDGFC-208ENST00000512711 ADAMTS12P58397 1594 aa-0.49□□□□□ -2.49
PDGFC-208ENST00000512711 ARHGEF5Q12774 1597 aa-0.49□□□□□ -2.49
PDGFC-208ENST00000512711 LRP5O75197 1615 aa-0.49□□□□□ -2.49
PDGFC-208ENST00000512711 CICQ96RK0 1608 aaPredicted RBP-0.49□□□□□ -2.49
PDGFC-208ENST00000512711 BIVM-ERCC5R4GMW8 1640 aa-0.49□□□□□ -2.49
PDGFC-208ENST00000512711 CDC42BPAQ5VT25 1732 aa-0.5□□□□□ -2.49
PDGFC-208ENST00000512711 NUP210Q8TEM1 1887 aaPredicted RBP-0.5□□□□□ -2.49
PDGFC-208ENST00000512711 CDK5RAP2Q96SN8 1893 aa-0.5□□□□□ -2.49
PDGFC-208ENST00000512711 TRAV22A0A0B4J277 110 aa-0.5□□□□□ -2.49
PDGFC-208ENST00000512711 TRBV27A0A0K0K1C4 114 aa-0.5□□□□□ -2.49
PDGFC-208ENST00000512711 FAM236AA0A1B0GUQ0 79 aa-0.5□□□□□ -2.49
PDGFC-208ENST00000512711 FAM236BA0A1B0GV22 79 aa-0.5□□□□□ -2.49
PDGFC-208ENST00000512711 MAP1LC3B2A6NCE7 125 aa-0.5□□□□□ -2.49
PDGFC-208ENST00000512711 PPP5D1E7EU14 171 aa-0.5□□□□□ -2.49
PDGFC-208ENST00000512711 H3BMG7 143 aa-0.5□□□□□ -2.49
PDGFC-208ENST00000512711 M0QZK8 103 aa-0.5□□□□□ -2.49
PDGFC-208ENST00000512711 OR2H2O95918 312 aa-0.5□□□□□ -2.49
PDGFC-208ENST00000512711 IFNA1P01562 189 aa-0.5□□□□□ -2.49
PDGFC-208ENST00000512711 S100A11P31949 105 aa-0.5□□□□□ -2.49
PDGFC-208ENST00000512711 SPRR1AP35321 89 aa-0.5□□□□□ -2.49
PDGFC-208ENST00000512711 PCBD1P61457 104 aa-0.5□□□□□ -2.49
PDGFC-208ENST00000512711 LSM3P62310 102 aaKnown RBP-0.5□□□□□ -2.49
PDGFC-208ENST00000512711 INSL4Q14641 139 aa-0.5□□□□□ -2.49
PDGFC-208ENST00000512711 DEFB110Q30KQ9 67 aa-0.5□□□□□ -2.49
PDGFC-208ENST00000512711 HRCT1Q6UXD1 115 aa-0.5□□□□□ -2.49
PDGFC-208ENST00000512711 FAM24BQ8N5W8 94 aa-0.5□□□□□ -2.49
PDGFC-208ENST00000512711 MORN4Q8NDC4 146 aa-0.5□□□□□ -2.49
PDGFC-208ENST00000512711 OTOSQ8NHW6 89 aa-0.5□□□□□ -2.49
PDGFC-208ENST00000512711 VPS25Q9BRG1 176 aa-0.5□□□□□ -2.49
PDGFC-208ENST00000512711 TECPR2O15040 1411 aa-0.5□□□□□ -2.49
PDGFC-208ENST00000512711 C10orf71Q711Q0 1435 aa-0.5□□□□□ -2.49
PDGFC-208ENST00000512711 ADGRL2O95490 1459 aa-0.5□□□□□ -2.49
PDGFC-208ENST00000512711 TCOF1Q13428 1488 aaKnown RBP-0.5□□□□□ -2.49
PDGFC-208ENST00000512711 C1orf167Q5SNV9 1468 aa-0.5□□□□□ -2.49
PDGFC-208ENST00000512711 TJP1Q07157 1748 aa-0.5□□□□□ -2.49
PDGFC-208ENST00000512711 BCORQ6W2J9 1755 aa-0.5□□□□□ -2.49
PDGFC-208ENST00000512711 MYH3P11055 1940 aa-0.5□□□□□ -2.49
PDGFC-208ENST00000512711 WDR97A6NE52 1622 aa-0.51□□□□□ -2.49
PDGFC-208ENST00000512711 TMEM14DPA8MWL7 114 aa-0.51□□□□□ -2.49
PDGFC-208ENST00000512711 HBDP02042 147 aa-0.51□□□□□ -2.49
PDGFC-208ENST00000512711 CTXN2P0C2S0 81 aa-0.51□□□□□ -2.49
PDGFC-208ENST00000512711 SPINK8P0C7L1 97 aa-0.51□□□□□ -2.49
PDGFC-208ENST00000512711 CRYGSP22914 178 aa-0.51□□□□□ -2.49
PDGFC-208ENST00000512711 ZNF142P52746 1687 aaPredicted RBP-0.51□□□□□ -2.49
PDGFC-208ENST00000512711 GNG3P63215 75 aa-0.51□□□□□ -2.49
PDGFC-208ENST00000512711 MRPS25P82663 173 aaKnown RBP-0.51□□□□□ -2.49
PDGFC-208ENST00000512711 TMED2Q15363 201 aa-0.51□□□□□ -2.49
PDGFC-208ENST00000512711 SLC48A1Q6P1K1 146 aa-0.51□□□□□ -2.49
PDGFC-208ENST00000512711 C3orf33Q6P1S2 294 aa-0.51□□□□□ -2.49
PDGFC-208ENST00000512711 DHRS4L2Q6PKH6 230 aa-0.51□□□□□ -2.49
PDGFC-208ENST00000512711 SMIM20Q8N5G0 67 aa-0.51□□□□□ -2.49
PDGFC-208ENST00000512711 OR4S1Q8NGB4 309 aa-0.51□□□□□ -2.49
PDGFC-208ENST00000512711 BRK1Q8WUW1 75 aa-0.51□□□□□ -2.49
PDGFC-208ENST00000512711 LXNQ9BS40 222 aa-0.51□□□□□ -2.49
PDGFC-208ENST00000512711 CNFNQ9BYD5 112 aa-0.51□□□□□ -2.49
PDGFC-208ENST00000512711 DPH3P1Q9H4G8 78 aa-0.51□□□□□ -2.49
PDGFC-208ENST00000512711 V9GYV3 84 aa-0.51□□□□□ -2.49
PDGFC-208ENST00000512711 ADGBQ8N7X0 1667 aa-0.52□□□□□ -2.49
PDGFC-208ENST00000512711 MED14O60244 1454 aa-0.52□□□□□ -2.49
PDGFC-208ENST00000512711 ARHGAP35Q9NRY4 1499 aa-0.52□□□□□ -2.49
PDGFC-208ENST00000512711 ANKRD50Q9ULJ7 1429 aa-0.52□□□□□ -2.49
PDGFC-208ENST00000512711 A0A087WVE0 104 aa-0.52□□□□□ -2.49
PDGFC-208ENST00000512711 FXYD6-FXYD2A0A087WZ82 144 aa-0.52□□□□□ -2.49
PDGFC-208ENST00000512711 TRGV1A0A0A0MS02 117 aa-0.52□□□□□ -2.49
PDGFC-208ENST00000512711 C20orf202A1L168 122 aa-0.52□□□□□ -2.49
PDGFC-208ENST00000512711 C9orf92A6NGG3 77 aa-0.52□□□□□ -2.49
PDGFC-208ENST00000512711 SSSCA1O60232 199 aa-0.52□□□□□ -2.49
PDGFC-208ENST00000512711 HSD11B1P28845 292 aa-0.52□□□□□ -2.49
PDGFC-208ENST00000512711 SRP9P49458 86 aaKnown RBP-0.52□□□□□ -2.49
PDGFC-208ENST00000512711 SSBP1Q04837 148 aaKnown RBP-0.52□□□□□ -2.49
PDGFC-208ENST00000512711 DEFB136Q30KP8 78 aa-0.52□□□□□ -2.49
PDGFC-208ENST00000512711 DEFB135Q30KP9 77 aa-0.52□□□□□ -2.49
PDGFC-208ENST00000512711 CLPSL2Q6UWE3 100 aa-0.52□□□□□ -2.49
PDGFC-208ENST00000512711 C20orf197Q8N268 126 aa-0.52□□□□□ -2.49
PDGFC-208ENST00000512711 STX19Q8N4C7 294 aa-0.52□□□□□ -2.49
PDGFC-208ENST00000512711 PPDPFLQ8WWR9 84 aa-0.52□□□□□ -2.49
PDGFC-208ENST00000512711 PARVGQ9HBI0 331 aa-0.52□□□□□ -2.49
PDGFC-208ENST00000512711 BATF3Q9NR55 127 aa-0.52□□□□□ -2.49
PDGFC-208ENST00000512711 LAMTOR2Q9Y2Q5 125 aa-0.52□□□□□ -2.49
PDGFC-208ENST00000512711 AKAP11Q9UKA4 1901 aa-0.52□□□□□ -2.49
PDGFC-208ENST00000512711 PLXNB2O15031 1838 aa-0.52□□□□□ -2.49
PDGFC-208ENST00000512711 XIRP1Q702N8 1843 aaKnown RBP-0.52□□□□□ -2.49
PDGFC-208ENST00000512711 RGPD8O14715 1765 aaPredicted RBP-0.52□□□□□ -2.49
PDGFC-208ENST00000512711 RGPD5Q99666 1765 aa-0.52□□□□□ -2.49
PDGFC-208ENST00000512711 ZC3H13Q5T200 1668 aaKnown RBP-0.53□□□□□ -2.49
PDGFC-208ENST00000512711 CAMSAP1Q5T5Y3 1602 aa-0.53□□□□□ -2.49
PDGFC-208ENST00000512711 KDM5CP41229 1560 aa-0.53□□□□□ -2.49
PDGFC-208ENST00000512711 BCL9LQ86UU0 1499 aa-0.53□□□□□ -2.49
PDGFC-208ENST00000512711 PTPRGP23470 1445 aa-0.53□□□□□ -2.49
PDGFC-208ENST00000512711 ARHGAP31Q2M1Z3 1444 aa-0.53□□□□□ -2.49
PDGFC-208ENST00000512711 CXorf51AA0A1B0GTR3 108 aa-0.53□□□□□ -2.49
PDGFC-208ENST00000512711 PNMA8CA0A1B0GUJ8 204 aa-0.53□□□□□ -2.49
PDGFC-208ENST00000512711 DEGS1O15121 323 aa-0.53□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms