RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 SPART-AS1P0CW21 52 aa5.77□□□□□ -1.49
HTT-209ENST00000512068 POLR2KP53803 58 aaKnown RBP5.77□□□□□ -1.49
HTT-209ENST00000512068 RIPPLY3P57055 190 aa5.77□□□□□ -1.49
HTT-209ENST00000512068 COTL1Q14019 142 aa5.77□□□□□ -1.49
HTT-209ENST00000512068 FAM222AQ5U5X8 452 aa5.77□□□□□ -1.49
HTT-209ENST00000512068 NEGR1Q7Z3B1 354 aa5.77□□□□□ -1.49
HTT-209ENST00000512068 C18orf15Q96N68 181 aa5.77□□□□□ -1.49
HTT-209ENST00000512068 SCGB3A1Q96QR1 104 aa5.77□□□□□ -1.49
HTT-209ENST00000512068 VAMP8Q9BV40 100 aa5.77□□□□□ -1.49
HTT-209ENST00000512068 STAB1Q9NY15 2570 aa5.76□□□□□ -1.49
HTT-209ENST00000512068 TRBV7-3A0A075B6L6 115 aa5.76□□□□□ -1.49
HTT-209ENST00000512068 TRBV6-4A0A1B0GX49 114 aa5.76□□□□□ -1.49
HTT-209ENST00000512068 TSTD3H0UI37 97 aa5.76□□□□□ -1.49
HTT-209ENST00000512068 P0DMU3 169 aa5.76□□□□□ -1.49
HTT-209ENST00000512068 FAM231AP0DMU4 169 aa5.76□□□□□ -1.49
HTT-209ENST00000512068 FAM231CP0DMU5 169 aa5.76□□□□□ -1.49
HTT-209ENST00000512068 SMAGPQ0VAQ4 97 aa5.76□□□□□ -1.49
HTT-209ENST00000512068 DEFB121Q5J5C9 76 aa5.76□□□□□ -1.49
HTT-209ENST00000512068 C2orf66Q6UXQ4 117 aa5.76□□□□□ -1.49
HTT-209ENST00000512068 NEXN-AS1Q8NBZ9 246 aa5.76□□□□□ -1.49
HTT-209ENST00000512068 ZNRF2Q8NHG8 242 aa5.76□□□□□ -1.49
HTT-209ENST00000512068 TOMM6Q96B49 74 aa5.76□□□□□ -1.49
HTT-209ENST00000512068 KRTAP3-1Q9BYR8 98 aa5.76□□□□□ -1.49
HTT-209ENST00000512068 GAGE12JA6NER3 117 aa5.75□□□□□ -1.49
HTT-209ENST00000512068 DEFB4AO15263 64 aa5.75□□□□□ -1.49
HTT-209ENST00000512068 GAGE1Q13065 139 aa5.75□□□□□ -1.49
HTT-209ENST00000512068 GAGE4Q13068 117 aa5.75□□□□□ -1.49
HTT-209ENST00000512068 GAGE5Q13069 117 aa5.75□□□□□ -1.49
HTT-209ENST00000512068 LINC00173Q6ZV60 143 aa5.75□□□□□ -1.49
HTT-209ENST00000512068 DAZ4Q86SG3 579 aaKnown RBP5.75□□□□□ -1.49
HTT-209ENST00000512068 PHLDA1Q8WV24 401 aaPredicted RBP5.75□□□□□ -1.49
HTT-209ENST00000512068 DAZ3Q9NR90 486 aaKnown RBP5.75□□□□□ -1.49
HTT-209ENST00000512068 DKK2Q9UBU2 259 aa5.75□□□□□ -1.49
HTT-209ENST00000512068 COL6A5A8TX70 2615 aa5.75□□□□□ -1.49
HTT-209ENST00000512068 A0A096LNJ9 63 aa5.74□□□□□ -1.49
HTT-209ENST00000512068 ATP5G1P05496 136 aa5.74□□□□□ -1.49
HTT-209ENST00000512068 TMEM97Q5BJF2 176 aa5.74□□□□□ -1.49
HTT-209ENST00000512068 PAPPA-AS1Q5QFB9 102 aa5.74□□□□□ -1.49
HTT-209ENST00000512068 LGALS9CQ6DKI2 356 aa5.74□□□□□ -1.49
HTT-209ENST00000512068 LINC00612Q8N6U2 182 aa5.74□□□□□ -1.49
HTT-209ENST00000512068 SLC25A29Q8N8R3 303 aa5.74□□□□□ -1.49
HTT-209ENST00000512068 Q8NAQ8 132 aa5.74□□□□□ -1.49
HTT-209ENST00000512068 TMEM141Q96I45 108 aa5.74□□□□□ -1.49
HTT-209ENST00000512068 HHLA3Q9XRX5 114 aa5.74□□□□□ -1.49
HTT-209ENST00000512068 IGHV3-38A0A0C4DH36 116 aa5.73□□□□□ -1.49
HTT-209ENST00000512068 PCP4L1A6NKN8 68 aa5.73□□□□□ -1.49
HTT-209ENST00000512068 UBE2L6O14933 153 aa5.73□□□□□ -1.49
HTT-209ENST00000512068 TSHBP01222 138 aa5.73□□□□□ -1.49
HTT-209ENST00000512068 PKIAP61925 76 aa5.73□□□□□ -1.49
HTT-209ENST00000512068 FHL2Q14192 279 aa5.73□□□□□ -1.49
HTT-209ENST00000512068 TEX43Q6ZNM6 134 aa5.73□□□□□ -1.49
HTT-209ENST00000512068 ERASQ7Z444 233 aa5.73□□□□□ -1.49
HTT-209ENST00000512068 SPATA12Q7Z6I5 190 aa5.73□□□□□ -1.49
HTT-209ENST00000512068 LURAP1LQ8IV03 231 aa5.73□□□□□ -1.49
HTT-209ENST00000512068 DEFB104AQ8WTQ1 72 aa5.73□□□□□ -1.49
HTT-209ENST00000512068 TIMM17AQ99595 171 aa5.73□□□□□ -1.49
HTT-209ENST00000512068 RETNQ9HD89 108 aa5.73□□□□□ -1.49
HTT-209ENST00000512068 PRO0255Q9UI72 69 aa5.73□□□□□ -1.49
HTT-209ENST00000512068 PAM16Q9Y3D7 125 aa5.73□□□□□ -1.49
HTT-209ENST00000512068 FBN1P35555 2871 aaKnown RBP5.73□□□□□ -1.49
HTT-209ENST00000512068 VWFP04275 2813 aa5.72□□□□□ -1.49
HTT-209ENST00000512068 F5H768 121 aa5.72□□□□□ -1.49
HTT-209ENST00000512068 PRB2P02812 416 aaPredicted RBP5.72□□□□□ -1.49
HTT-209ENST00000512068 HTN3P15516 51 aa5.72□□□□□ -1.49
HTT-209ENST00000512068 SPATA45Q537H7 98 aa5.72□□□□□ -1.49
HTT-209ENST00000512068 KPRPQ5T749 579 aaPredicted RBP5.72□□□□□ -1.49
HTT-209ENST00000512068 LINC01545Q5VT33 79 aa5.72□□□□□ -1.49
HTT-209ENST00000512068 DGAT2L7PQ6IED9 249 aa5.72□□□□□ -1.49
HTT-209ENST00000512068 ATOH7Q8N100 152 aa5.72□□□□□ -1.49
HTT-209ENST00000512068 C20orf203Q8NBC4 194 aa5.72□□□□□ -1.49
HTT-209ENST00000512068 MRAPQ8TCY5 172 aa5.72□□□□□ -1.49
HTT-209ENST00000512068 C11orf68Q9H3H3 251 aaKnown RBP5.72□□□□□ -1.49
HTT-209ENST00000512068 TRBV25-1A0A075B6N4 114 aa5.71□□□□□ -1.5
HTT-209ENST00000512068 TRAV9-2A0A087WT02 112 aa5.71□□□□□ -1.5
HTT-209ENST00000512068 TRAV12-1A0A0B4J245 112 aa5.71□□□□□ -1.5
HTT-209ENST00000512068 PRSS29PA6NIE9 313 aa5.71□□□□□ -1.5
HTT-209ENST00000512068 K7EIL1 84 aa5.71□□□□□ -1.5
HTT-209ENST00000512068 DPM2O94777 84 aa5.71□□□□□ -1.5
HTT-209ENST00000512068 PLNP26678 52 aa5.71□□□□□ -1.5
HTT-209ENST00000512068 CRYBA4P53673 196 aa5.71□□□□□ -1.5
HTT-209ENST00000512068 UBE2D3P61077 147 aa5.71□□□□□ -1.5
HTT-209ENST00000512068 UBE2D2P62837 147 aa5.71□□□□□ -1.5
HTT-209ENST00000512068 RPL39P62891 51 aaKnown RBP5.71□□□□□ -1.5
HTT-209ENST00000512068 AMMECR1LQ6DCA0 310 aa5.71□□□□□ -1.5
HTT-209ENST00000512068 C2orf88Q9BSF0 95 aa5.71□□□□□ -1.5
HTT-209ENST00000512068 SPANXA1Q9NS26 97 aa5.71□□□□□ -1.5
HTT-209ENST00000512068 CELA1Q9UNI1 258 aa5.71□□□□□ -1.5
HTT-209ENST00000512068 CHTOPQ9Y3Y2 248 aaKnown RBP5.71□□□□□ -1.5
HTT-209ENST00000512068 A0A087WX48 190 aa5.7□□□□□ -1.5
HTT-209ENST00000512068 IGKCP01834 107 aa5.7□□□□□ -1.5
HTT-209ENST00000512068 GCSHP23434 173 aa5.7□□□□□ -1.5
HTT-209ENST00000512068 PMVKQ15126 192 aa5.7□□□□□ -1.5
HTT-209ENST00000512068 LCE4AQ5TA78 99 aa5.7□□□□□ -1.5
HTT-209ENST00000512068 SH2D6Q7Z4S9 175 aa5.7□□□□□ -1.5
HTT-209ENST00000512068 Q8N976 141 aa5.7□□□□□ -1.5
HTT-209ENST00000512068 ATP6V0E2Q8NHE4 81 aa5.7□□□□□ -1.5
HTT-209ENST00000512068 BAALCQ8WXS3 180 aa5.7□□□□□ -1.5
HTT-209ENST00000512068 TMEM101Q96IK0 257 aa5.7□□□□□ -1.5
HTT-209ENST00000512068 PMCHL2Q9BQD1 86 aa5.7□□□□□ -1.5
HTT-209ENST00000512068 TMEM243Q9BU79 118 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms