RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 TRGV2A0A075B6R0 118 aa4.01□□□□□ -1.77
RNF4-217ENST00000511892 PRSS47A8MTI9 375 aa4.01□□□□□ -1.77
RNF4-217ENST00000511892 M0R381 172 aa4.01□□□□□ -1.77
RNF4-217ENST00000511892 NXPH4O95158 308 aa4.01□□□□□ -1.77
RNF4-217ENST00000511892 CKS2P33552 79 aa4.01□□□□□ -1.77
RNF4-217ENST00000511892 PKIAP61925 76 aa4.01□□□□□ -1.77
RNF4-217ENST00000511892 FHL2Q14192 279 aa4.01□□□□□ -1.77
RNF4-217ENST00000511892 PMCHL1Q16048 86 aa4.01□□□□□ -1.77
RNF4-217ENST00000511892 MRPL51Q4U2R6 128 aaKnown RBP4.01□□□□□ -1.77
RNF4-217ENST00000511892 MUC21Q5SSG8 566 aa4.01□□□□□ -1.77
RNF4-217ENST00000511892 SPANXN1Q5VSR9 72 aa4.01□□□□□ -1.77
RNF4-217ENST00000511892 RNASEKQ6P5S7 137 aaKnown RBP4.01□□□□□ -1.77
RNF4-217ENST00000511892 FAM159AQ6UWV7 190 aa4.01□□□□□ -1.77
RNF4-217ENST00000511892 FA2HQ7L5A8 372 aa4.01□□□□□ -1.77
RNF4-217ENST00000511892 AMN1Q8IY45 258 aa4.01□□□□□ -1.77
RNF4-217ENST00000511892 C6orf223Q8N319 242 aa4.01□□□□□ -1.77
RNF4-217ENST00000511892 MRAP2Q96G30 205 aa4.01□□□□□ -1.77
RNF4-217ENST00000511892 UPK3BQ9BT76 320 aa4.01□□□□□ -1.77
RNF4-217ENST00000511892 NXT2Q9NPJ8 142 aaKnown RBP4.01□□□□□ -1.77
RNF4-217ENST00000511892 AP5S1Q9NUS5 200 aa4.01□□□□□ -1.77
RNF4-217ENST00000511892 MRPL16Q9NX20 251 aaKnown RBP4.01□□□□□ -1.77
RNF4-217ENST00000511892 MDFICQ9P1T7 246 aa4.01□□□□□ -1.77
RNF4-217ENST00000511892 NAGKQ9UJ70 344 aa4.01□□□□□ -1.77
RNF4-217ENST00000511892 C20orf202A1L168 122 aa4□□□□□ -1.77
RNF4-217ENST00000511892 LINC01546A6NGU7 62 aa4□□□□□ -1.77
RNF4-217ENST00000511892 D6R8Y8 96 aa4□□□□□ -1.77
RNF4-217ENST00000511892 TSTD3H0UI37 97 aa4□□□□□ -1.77
RNF4-217ENST00000511892 K7EMI3 77 aa4□□□□□ -1.77
RNF4-217ENST00000511892 SCGB1D1O95968 90 aa4□□□□□ -1.77
RNF4-217ENST00000511892 IGHV3-53P01767 116 aa4□□□□□ -1.77
RNF4-217ENST00000511892 PIK3CD-AS1Q5SR53 167 aa4□□□□□ -1.77
RNF4-217ENST00000511892 SYT8Q8NBV8 401 aa4□□□□□ -1.77
RNF4-217ENST00000511892 OR10AG1Q8NH19 301 aa4□□□□□ -1.77
RNF4-217ENST00000511892 PRSS3P2Q8NHM4 247 aa4□□□□□ -1.77
RNF4-217ENST00000511892 PTH2Q96A98 100 aa4□□□□□ -1.77
RNF4-217ENST00000511892 RNF185Q96GF1 192 aa4□□□□□ -1.77
RNF4-217ENST00000511892 AP1S3Q96PC3 154 aa4□□□□□ -1.77
RNF4-217ENST00000511892 MAP1LC3AQ9H492 121 aa4□□□□□ -1.77
RNF4-217ENST00000511892 DPH3P1Q9H4G8 78 aa4□□□□□ -1.77
RNF4-217ENST00000511892 HSPB8Q9UJY1 196 aa4□□□□□ -1.77
RNF4-217ENST00000511892 MRPS16Q9Y3D3 137 aaKnown RBP4□□□□□ -1.77
RNF4-217ENST00000511892 PHLDA3Q9Y5J5 127 aa4□□□□□ -1.77
RNF4-217ENST00000511892 IGHV3-16A0A0C4DH30 117 aa3.99□□□□□ -1.77
RNF4-217ENST00000511892 LINC01549A6NIU2 74 aa3.99□□□□□ -1.77
RNF4-217ENST00000511892 H3BVH4 76 aa3.99□□□□□ -1.77
RNF4-217ENST00000511892 GNRH2O43555 120 aa3.99□□□□□ -1.77
RNF4-217ENST00000511892 LEPROTL1O95214 131 aa3.99□□□□□ -1.77
RNF4-217ENST00000511892 RNASE3P12724 160 aaKnown RBP3.99□□□□□ -1.77
RNF4-217ENST00000511892 BTF3P20290 206 aaKnown RBP3.99□□□□□ -1.77
RNF4-217ENST00000511892 CRYBA4P53673 196 aa3.99□□□□□ -1.77
RNF4-217ENST00000511892 RPL32P62910 135 aaKnown RBP3.99□□□□□ -1.77
RNF4-217ENST00000511892 ZNF415Q09FC8 603 aa3.99□□□□□ -1.77
RNF4-217ENST00000511892 PET117Q6UWS5 81 aa3.99□□□□□ -1.77
RNF4-217ENST00000511892 TEX43Q6ZNM6 134 aa3.99□□□□□ -1.77
RNF4-217ENST00000511892 RASL10AQ92737 203 aa3.99□□□□□ -1.77
RNF4-217ENST00000511892 URB1-AS1Q96HZ7 61 aa3.99□□□□□ -1.77
RNF4-217ENST00000511892 ZNF479Q96JC4 524 aa3.99□□□□□ -1.77
RNF4-217ENST00000511892 C9orf85Q96MD7 179 aa3.99□□□□□ -1.77
RNF4-217ENST00000511892 C20orf78Q9BR46 151 aa3.99□□□□□ -1.77
RNF4-217ENST00000511892 FAT1Q14517 4588 aa3.98□□□□□ -1.77
RNF4-217ENST00000511892 IGHV1-24A0A0C4DH33 117 aa3.98□□□□□ -1.77
RNF4-217ENST00000511892 PCP4L1A6NKN8 68 aa3.98□□□□□ -1.77
RNF4-217ENST00000511892 TNFRSF6BO95407 300 aa3.98□□□□□ -1.77
RNF4-217ENST00000511892 HBDP02042 147 aa3.98□□□□□ -1.77
RNF4-217ENST00000511892 C3orf79P0CE67 100 aa3.98□□□□□ -1.77
RNF4-217ENST00000511892 SMIM17P0DL12 118 aa3.98□□□□□ -1.77
RNF4-217ENST00000511892 EVI2AP22794 236 aa3.98□□□□□ -1.77
RNF4-217ENST00000511892 G0S2P27469 103 aa3.98□□□□□ -1.77
RNF4-217ENST00000511892 KRTDAPP60985 99 aa3.98□□□□□ -1.77
RNF4-217ENST00000511892 TTC32Q5I0X7 151 aa3.98□□□□□ -1.77
RNF4-217ENST00000511892 LYPD5Q6UWN5 251 aa3.98□□□□□ -1.77
RNF4-217ENST00000511892 Q6ZRN7 208 aaPredicted RBP3.98□□□□□ -1.77
RNF4-217ENST00000511892 SPATA12Q7Z6I5 190 aa3.98□□□□□ -1.77
RNF4-217ENST00000511892 FAM19A2Q8N3H0 131 aa3.98□□□□□ -1.77
RNF4-217ENST00000511892 Q8N8P6 123 aa3.98□□□□□ -1.77
RNF4-217ENST00000511892 TMEM70Q9BUB7 260 aa3.98□□□□□ -1.77
RNF4-217ENST00000511892 MAP1LC3CQ9BXW4 147 aa3.98□□□□□ -1.77
RNF4-217ENST00000511892 MSRB1Q9NZV6 116 aa3.98□□□□□ -1.77
RNF4-217ENST00000511892 PRO0255Q9UI72 69 aa3.98□□□□□ -1.77
RNF4-217ENST00000511892 HHLA3Q9XRX5 114 aa3.98□□□□□ -1.77
RNF4-217ENST00000511892 ICOSQ9Y6W8 199 aa3.98□□□□□ -1.77
RNF4-217ENST00000511892 TRGV4A0A0C4DH28 118 aa3.97□□□□□ -1.77
RNF4-217ENST00000511892 MUC21A0A0G2JKD1 596 aa3.97□□□□□ -1.77
RNF4-217ENST00000511892 MUC21A0A140T8X8 626 aa3.97□□□□□ -1.77
RNF4-217ENST00000511892 C16orf90A8MZG2 172 aa3.97□□□□□ -1.77
RNF4-217ENST00000511892 K7EQD1 137 aa3.97□□□□□ -1.77
RNF4-217ENST00000511892 TCAPO15273 167 aa3.97□□□□□ -1.77
RNF4-217ENST00000511892 NPYP01303 97 aa3.97□□□□□ -1.77
RNF4-217ENST00000511892 FCER1GP30273 86 aa3.97□□□□□ -1.77
RNF4-217ENST00000511892 IFI27P40305 119 aaPredicted RBP3.97□□□□□ -1.77
RNF4-217ENST00000511892 LINC00315P59091 139 aa3.97□□□□□ -1.77
RNF4-217ENST00000511892 KRTAP10-2P60368 255 aa3.97□□□□□ -1.77
RNF4-217ENST00000511892 MRPL52Q86TS9 123 aaKnown RBP3.97□□□□□ -1.77
RNF4-217ENST00000511892 Q8N976 141 aa3.97□□□□□ -1.77
RNF4-217ENST00000511892 SPXQ9BT56 116 aa3.97□□□□□ -1.77
RNF4-217ENST00000511892 VAMP8Q9BV40 100 aa3.97□□□□□ -1.77
RNF4-217ENST00000511892 TRAV4A0A0B4J268 109 aa3.96□□□□□ -1.78
RNF4-217ENST00000511892 TRBV6-5A0A0K0K1A5 114 aa3.96□□□□□ -1.78
RNF4-217ENST00000511892 LOC100131303A0A0U1RQF7 123 aa3.96□□□□□ -1.78
RNF4-217ENST00000511892 SYS1-DBNDD2H3BUS1 97 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms