RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 IGHV3-30P01768 117 aa10.52□□□□□ -0.73
SH3TC1-220ENST00000511002 IGHV3-33P01772 117 aa10.52□□□□□ -0.73
SH3TC1-220ENST00000511002 PPBPP02775 128 aa10.52□□□□□ -0.73
SH3TC1-220ENST00000511002 IGHV3-30-3P0DP02 117 aa10.52□□□□□ -0.73
SH3TC1-220ENST00000511002 IGHV3-30-5P0DP03 117 aa10.52□□□□□ -0.73
SH3TC1-220ENST00000511002 POLR2KP53803 58 aaKnown RBP10.52□□□□□ -0.73
SH3TC1-220ENST00000511002 SUMO2P61956 95 aaKnown RBP10.52□□□□□ -0.73
SH3TC1-220ENST00000511002 COTL1Q14019 142 aa10.52□□□□□ -0.73
SH3TC1-220ENST00000511002 TMEM97Q5BJF2 176 aa10.52□□□□□ -0.73
SH3TC1-220ENST00000511002 TTC32Q5I0X7 151 aa10.52□□□□□ -0.73
SH3TC1-220ENST00000511002 PRELID3AQ96N28 172 aa10.52□□□□□ -0.73
SH3TC1-220ENST00000511002 GNB1LQ9BYB4 327 aa10.52□□□□□ -0.73
SH3TC1-220ENST00000511002 TRBV25-1A0A075B6N4 114 aa10.51□□□□□ -0.73
SH3TC1-220ENST00000511002 IGHV1-24A0A0C4DH33 117 aa10.51□□□□□ -0.73
SH3TC1-220ENST00000511002 I3L3M4 83 aa10.51□□□□□ -0.73
SH3TC1-220ENST00000511002 HLA-DQA1P01909 254 aa10.51□□□□□ -0.73
SH3TC1-220ENST00000511002 PMCHP20382 165 aa10.51□□□□□ -0.73
SH3TC1-220ENST00000511002 IQCJQ1A5X6 159 aa10.51□□□□□ -0.73
SH3TC1-220ENST00000511002 LINC01556Q5JQF7 62 aa10.51□□□□□ -0.73
SH3TC1-220ENST00000511002 NIT1Q86X76 327 aa10.51□□□□□ -0.73
SH3TC1-220ENST00000511002 SMCO4Q9NRQ5 59 aa10.51□□□□□ -0.73
SH3TC1-220ENST00000511002 TRBV27A0A0K0K1C4 114 aa10.5□□□□□ -0.73
SH3TC1-220ENST00000511002 TSHBP01222 138 aa10.5□□□□□ -0.73
SH3TC1-220ENST00000511002 APCSP02743 223 aa10.5□□□□□ -0.73
SH3TC1-220ENST00000511002 AMTP48728 403 aa10.5□□□□□ -0.73
SH3TC1-220ENST00000511002 KIAA1644Q3SXP7 199 aa10.5□□□□□ -0.73
SH3TC1-220ENST00000511002 C20orf78Q9BR46 151 aa10.5□□□□□ -0.73
SH3TC1-220ENST00000511002 CHCHD5Q9BSY4 110 aa10.5□□□□□ -0.73
SH3TC1-220ENST00000511002 GAGE6Q13070 117 aa10.49□□□□□ -0.73
SH3TC1-220ENST00000511002 COX19Q49B96 90 aa10.49□□□□□ -0.73
SH3TC1-220ENST00000511002 TMEM243Q9BU79 118 aa10.49□□□□□ -0.73
SH3TC1-220ENST00000511002 MRPL18Q9H0U6 180 aaKnown RBP10.49□□□□□ -0.73
SH3TC1-220ENST00000511002 LRP1BQ9NZR2 4599 aa10.48□□□□□ -0.73
SH3TC1-220ENST00000511002 VCYO14598 125 aa10.48□□□□□ -0.73
SH3TC1-220ENST00000511002 PHOX2AO14813 284 aa10.48□□□□□ -0.73
SH3TC1-220ENST00000511002 MT-ND6P03923 174 aa10.48□□□□□ -0.73
SH3TC1-220ENST00000511002 Q6ZRN7 208 aaPredicted RBP10.48□□□□□ -0.73
SH3TC1-220ENST00000511002 SMIM2Q9BVW6 85 aa10.48□□□□□ -0.73
SH3TC1-220ENST00000511002 TMEM262E9PQX1 116 aa10.47□□□□□ -0.73
SH3TC1-220ENST00000511002 SCO1O75880 301 aa10.47□□□□□ -0.73
SH3TC1-220ENST00000511002 RPL32P62910 135 aaKnown RBP10.47□□□□□ -0.73
SH3TC1-220ENST00000511002 MPV17L2Q567V2 206 aa10.47□□□□□ -0.73
SH3TC1-220ENST00000511002 CHCHD7Q9BUK0 85 aa10.47□□□□□ -0.73
SH3TC1-220ENST00000511002 LAMTOR2Q9Y2Q5 125 aa10.47□□□□□ -0.73
SH3TC1-220ENST00000511002 TRAV9-2A0A087WT02 112 aa10.46□□□□□ -0.73
SH3TC1-220ENST00000511002 A0A087WX48 190 aa10.46□□□□□ -0.73
SH3TC1-220ENST00000511002 FABP9Q0Z7S8 132 aa10.46□□□□□ -0.73
SH3TC1-220ENST00000511002 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.45□□□□□ -0.74
SH3TC1-220ENST00000511002 LOC389332A0A1B0GUA5 103 aa10.45□□□□□ -0.74
SH3TC1-220ENST00000511002 IGKV2-29A2NJV5 120 aaPredicted RBP10.45□□□□□ -0.74
SH3TC1-220ENST00000511002 ATP6V1G1O75348 118 aa10.45□□□□□ -0.74
SH3TC1-220ENST00000511002 FCER1GP30273 86 aa10.45□□□□□ -0.74
SH3TC1-220ENST00000511002 C10orf126Q8N4M7 172 aa10.45□□□□□ -0.74
SH3TC1-220ENST00000511002 Q8N976 141 aa10.45□□□□□ -0.74
SH3TC1-220ENST00000511002 MAP1LC3AQ9H492 121 aa10.45□□□□□ -0.74
SH3TC1-220ENST00000511002 TRAPPC1Q9Y5R8 145 aa10.45□□□□□ -0.74
SH3TC1-220ENST00000511002 DNAH5Q8TE73 4624 aa10.44□□□□□ -0.74
SH3TC1-220ENST00000511002 RYR1P21817 5038 aa10.44□□□□□ -0.74
SH3TC1-220ENST00000511002 UBE2L6O14933 153 aa10.44□□□□□ -0.74
SH3TC1-220ENST00000511002 ESDP10768 282 aa10.44□□□□□ -0.74
SH3TC1-220ENST00000511002 RBX1P62877 108 aa10.44□□□□□ -0.74
SH3TC1-220ENST00000511002 KIR2DL4Q99706 377 aa10.44□□□□□ -0.74
SH3TC1-220ENST00000511002 ALKBH7Q9BT30 221 aaPredicted RBP10.44□□□□□ -0.74
SH3TC1-220ENST00000511002 PRSS47A8MTI9 375 aa10.43□□□□□ -0.74
SH3TC1-220ENST00000511002 IBA57-AS1B1ANH7 110 aa10.43□□□□□ -0.74
SH3TC1-220ENST00000511002 K7EP13 123 aa10.43□□□□□ -0.74
SH3TC1-220ENST00000511002 TCAPO15273 167 aa10.43□□□□□ -0.74
SH3TC1-220ENST00000511002 KRTAP10-2P60368 255 aa10.43□□□□□ -0.74
SH3TC1-220ENST00000511002 PKIAP61925 76 aa10.43□□□□□ -0.74
SH3TC1-220ENST00000511002 SPATA12Q7Z6I5 190 aa10.43□□□□□ -0.74
SH3TC1-220ENST00000511002 KLK12Q9UKR0 248 aa10.43□□□□□ -0.74
SH3TC1-220ENST00000511002 C16orf90A8MZG2 172 aa10.42□□□□□ -0.74
SH3TC1-220ENST00000511002 FUSP35637 526 aaKnown RBP eCLIP10.42□□□□□ -0.74
SH3TC1-220ENST00000511002 Q9HAA7 133 aa10.42□□□□□ -0.74
SH3TC1-220ENST00000511002 IGLV4-60A0A075B6I1 120 aa10.41□□□□□ -0.74
SH3TC1-220ENST00000511002 BTF3P20290 206 aaKnown RBP10.41□□□□□ -0.74
SH3TC1-220ENST00000511002 Q8N8P6 123 aa10.41□□□□□ -0.74
SH3TC1-220ENST00000511002 HSPG2P98160 4391 aa10.4□□□□□ -0.74
SH3TC1-220ENST00000511002 COLCA2A8K830 154 aa10.4□□□□□ -0.74
SH3TC1-220ENST00000511002 ANGP03950 147 aaKnown RBP10.4□□□□□ -0.74
SH3TC1-220ENST00000511002 FGF6P10767 208 aa10.4□□□□□ -0.74
SH3TC1-220ENST00000511002 LAGE3Q14657 143 aa10.4□□□□□ -0.74
SH3TC1-220ENST00000511002 C20orf203Q8NBC4 194 aa10.4□□□□□ -0.74
SH3TC1-220ENST00000511002 KRTAP17-1Q9BYP8 105 aa10.4□□□□□ -0.74
SH3TC1-220ENST00000511002 A0A1B0GUV1 79 aa10.39□□□□□ -0.75
SH3TC1-220ENST00000511002 H7C423 109 aa10.39□□□□□ -0.75
SH3TC1-220ENST00000511002 IFI27P40305 119 aaPredicted RBP10.39□□□□□ -0.75
SH3TC1-220ENST00000511002 AMMECR1LQ6DCA0 310 aa10.39□□□□□ -0.75
SH3TC1-220ENST00000511002 RNASEKQ6P5S7 137 aaKnown RBP10.39□□□□□ -0.75
SH3TC1-220ENST00000511002 CLPSL2Q6UWE3 100 aa10.39□□□□□ -0.75
SH3TC1-220ENST00000511002 UBE2WQ96B02 151 aa10.39□□□□□ -0.75
SH3TC1-220ENST00000511002 APOBP04114 4563 aaKnown RBP10.39□□□□□ -0.75
SH3TC1-220ENST00000511002 RAB5AP20339 215 aa10.38□□□□□ -0.75
SH3TC1-220ENST00000511002 S100A1P23297 94 aa10.38□□□□□ -0.75
SH3TC1-220ENST00000511002 ENHOQ6UWT2 76 aa10.38□□□□□ -0.75
SH3TC1-220ENST00000511002 LINC00269Q8N2A0 174 aa10.38□□□□□ -0.75
SH3TC1-220ENST00000511002 NXT2Q9NPJ8 142 aaKnown RBP10.38□□□□□ -0.75
SH3TC1-220ENST00000511002 RPL39P62891 51 aaKnown RBP10.37□□□□□ -0.75
SH3TC1-220ENST00000511002 MRPL52Q86TS9 123 aaKnown RBP10.37□□□□□ -0.75
SH3TC1-220ENST00000511002 TRAV8-3A0A0A6YYJ7 113 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms