RNA–Protein interactions for RNA: ENST00000510866.5

KDM3B-207, Transcript of lysine demethylase 3B, humanhuman

TSL 1 (best)

Gene KDM3B, Length 6,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-207ENST00000510866 Q6ZS46 218 aa5.4□□□□□ -1.55
KDM3B-207ENST00000510866 A0A0J9YXV3 536 aa5.39□□□□□ -1.55
KDM3B-207ENST00000510866 ZNF747Q9BV97 191 aa5.39□□□□□ -1.55
KDM3B-207ENST00000510866 AVPP01185 164 aa5.39□□□□□ -1.55
KDM3B-207ENST00000510866 CTRLP40313 264 aa5.39□□□□□ -1.55
KDM3B-207ENST00000510866 CFC1BP0CG36 223 aa5.39□□□□□ -1.55
KDM3B-207ENST00000510866 CFC1P0CG37 223 aa5.39□□□□□ -1.55
KDM3B-207ENST00000510866 UBE2AP49459 152 aa5.39□□□□□ -1.55
KDM3B-207ENST00000510866 NDUFB1O75438 58 aa5.39□□□□□ -1.55
KDM3B-207ENST00000510866 C11orf1Q9H5F2 150 aa5.39□□□□□ -1.55
KDM3B-207ENST00000510866 P0DMU3 169 aa5.38□□□□□ -1.55
KDM3B-207ENST00000510866 FAM231AP0DMU4 169 aa5.38□□□□□ -1.55
KDM3B-207ENST00000510866 FAM231CP0DMU5 169 aa5.38□□□□□ -1.55
KDM3B-207ENST00000510866 MIFP14174 115 aa5.38□□□□□ -1.55
KDM3B-207ENST00000510866 SPAG11BQ08648 103 aa5.38□□□□□ -1.55
KDM3B-207ENST00000510866 Q8N6K4 173 aa5.38□□□□□ -1.55
KDM3B-207ENST00000510866 PTPN13Q12923 2485 aa5.38□□□□□ -1.55
KDM3B-207ENST00000510866 NCR3O14931 201 aa5.38□□□□□ -1.55
KDM3B-207ENST00000510866 ZFAND3Q9H8U3 227 aa5.38□□□□□ -1.55
KDM3B-207ENST00000510866 CRYGDP07320 174 aa5.38□□□□□ -1.55
KDM3B-207ENST00000510866 ANKHD1Q8IWZ3 2542 aaKnown RBP5.38□□□□□ -1.55
KDM3B-207ENST00000510866 SIVA1O15304 175 aa5.38□□□□□ -1.55
KDM3B-207ENST00000510866 NREPQ16612 68 aa5.38□□□□□ -1.55
KDM3B-207ENST00000510866 NCOA6Q14686 2063 aaPredicted RBP5.38□□□□□ -1.55
KDM3B-207ENST00000510866 FAM240AA0A1B0GVK7 77 aa5.38□□□□□ -1.55
KDM3B-207ENST00000510866 ZNF80P51504 273 aaPredicted RBP5.38□□□□□ -1.55
KDM3B-207ENST00000510866 TRBV10-1A0A0K0K1A3 114 aa5.37□□□□□ -1.55
KDM3B-207ENST00000510866 NDUFA7O95182 113 aa5.37□□□□□ -1.55
KDM3B-207ENST00000510866 C14orf177Q52M58 125 aa5.37□□□□□ -1.55
KDM3B-207ENST00000510866 TOMM6Q96B49 74 aa5.37□□□□□ -1.55
KDM3B-207ENST00000510866 BBC3Q96PG8 261 aaPredicted RBP5.37□□□□□ -1.55
KDM3B-207ENST00000510866 TIMM17AQ99595 171 aa5.37□□□□□ -1.55
KDM3B-207ENST00000510866 GDF5OSQ5U4N7 250 aa5.37□□□□□ -1.55
KDM3B-207ENST00000510866 K7ERS5 55 aa5.37□□□□□ -1.55
KDM3B-207ENST00000510866 MYO9AB2RTY4 2548 aa5.37□□□□□ -1.55
KDM3B-207ENST00000510866 HIGD2BQ4VC39 106 aa5.37□□□□□ -1.55
KDM3B-207ENST00000510866 WFDC10AQ9H1F0 79 aa5.37□□□□□ -1.55
KDM3B-207ENST00000510866 OXLD1Q5BKU9 147 aa5.36□□□□□ -1.55
KDM3B-207ENST00000510866 TRAV10A0A0B4J240 114 aa5.36□□□□□ -1.55
KDM3B-207ENST00000510866 IGKV4-1P06312 121 aa5.36□□□□□ -1.55
KDM3B-207ENST00000510866 NDUFC2-KCTD14E9PQ53 114 aa5.36□□□□□ -1.55
KDM3B-207ENST00000510866 ZNF295-AS1Q8N0V1 137 aa5.36□□□□□ -1.55
KDM3B-207ENST00000510866 LINC00269Q8N2A0 174 aa5.36□□□□□ -1.55
KDM3B-207ENST00000510866 IGLV1-40P01703 118 aa5.36□□□□□ -1.55
KDM3B-207ENST00000510866 SND1-IT1Q9HBX3 110 aa5.36□□□□□ -1.55
KDM3B-207ENST00000510866 CXCL5P42830 114 aa5.36□□□□□ -1.55
KDM3B-207ENST00000510866 C19orf71A6NCJ1 209 aa5.35□□□□□ -1.55
KDM3B-207ENST00000510866 IGKV2-24A0A0C4DH68 120 aa5.35□□□□□ -1.55
KDM3B-207ENST00000510866 REG3AQ06141 175 aa5.35□□□□□ -1.55
KDM3B-207ENST00000510866 CASC2Q6XLA1 102 aa5.35□□□□□ -1.55
KDM3B-207ENST00000510866 A0A1W2PPR1 153 aa5.35□□□□□ -1.55
KDM3B-207ENST00000510866 CEMP1Q6PRD7 247 aaPredicted RBP5.35□□□□□ -1.55
KDM3B-207ENST00000510866 H0Y9J4 135 aa5.35□□□□□ -1.55
KDM3B-207ENST00000510866 LINC00173Q6ZV60 143 aa5.35□□□□□ -1.55
KDM3B-207ENST00000510866 ADAMTS20P59510 1910 aa5.34□□□□□ -1.55
KDM3B-207ENST00000510866 Q6ZUT4 128 aa5.34□□□□□ -1.55
KDM3B-207ENST00000510866 PCP2Q8IVA1 136 aa5.34□□□□□ -1.55
KDM3B-207ENST00000510866 DAND5Q8N907 189 aa5.34□□□□□ -1.55
KDM3B-207ENST00000510866 OPRPNQ99935 248 aaPredicted RBP5.34□□□□□ -1.55
KDM3B-207ENST00000510866 KIAA1549Q9HCM3 1950 aa5.34□□□□□ -1.55
KDM3B-207ENST00000510866 C1orf195Q5TG92 126 aa5.34□□□□□ -1.55
KDM3B-207ENST00000510866 FAM236DA0A1B0GTK5 79 aa5.34□□□□□ -1.55
KDM3B-207ENST00000510866 FAM236CP0DP71 79 aa5.34□□□□□ -1.55
KDM3B-207ENST00000510866 NAV3Q8IVL0 2385 aa5.34□□□□□ -1.55
KDM3B-207ENST00000510866 IGLV2-18A0A075B6J9 118 aa5.34□□□□□ -1.55
KDM3B-207ENST00000510866 G3V4G9 280 aa5.34□□□□□ -1.55
KDM3B-207ENST00000510866 C4orf48Q5BLP8 95 aa5.34□□□□□ -1.55
KDM3B-207ENST00000510866 TRAV23DV6A0A075B6W5 121 aa5.34□□□□□ -1.56
KDM3B-207ENST00000510866 M0R2N4 97 aa5.34□□□□□ -1.56
KDM3B-207ENST00000510866 LY6G6CO95867 125 aa5.34□□□□□ -1.56
KDM3B-207ENST00000510866 C20orf203Q8NBC4 194 aa5.34□□□□□ -1.56
KDM3B-207ENST00000510866 RNASE8Q8TDE3 154 aaKnown RBP5.33□□□□□ -1.56
KDM3B-207ENST00000510866 NACAE9PAV3 2078 aa5.33□□□□□ -1.56
KDM3B-207ENST00000510866 CFAP126Q5VTH2 177 aa5.33□□□□□ -1.56
KDM3B-207ENST00000510866 CDPF1Q6NVV7 123 aa5.33□□□□□ -1.56
KDM3B-207ENST00000510866 ZFAND2AQ8N6M9 145 aa5.33□□□□□ -1.56
KDM3B-207ENST00000510866 PRR15LQ9BU68 103 aa5.33□□□□□ -1.56
KDM3B-207ENST00000510866 RAI1Q7Z5J4 1906 aaPredicted RBP5.33□□□□□ -1.56
KDM3B-207ENST00000510866 FOXI1Q12951 378 aa5.33□□□□□ -1.56
KDM3B-207ENST00000510866 UPK3BQ9BT76 320 aa5.33□□□□□ -1.56
KDM3B-207ENST00000510866 C3orf22Q8N5N4 141 aa5.33□□□□□ -1.56
KDM3B-207ENST00000510866 CCDC168Q8NDH2 2452 aa5.33□□□□□ -1.56
KDM3B-207ENST00000510866 WFDC2Q14508 124 aa5.33□□□□□ -1.56
KDM3B-207ENST00000510866 LINC00322Q6ZN03 302 aaPredicted RBP5.33□□□□□ -1.56
KDM3B-207ENST00000510866 NEXN-AS1Q8NBZ9 246 aa5.33□□□□□ -1.56
KDM3B-207ENST00000510866 CLEC2BQ92478 149 aa5.33□□□□□ -1.56
KDM3B-207ENST00000510866 A0A0J9YWU9 116 aa5.32□□□□□ -1.56
KDM3B-207ENST00000510866 CHCHD10Q8WYQ3 142 aaPredicted RBP5.32□□□□□ -1.56
KDM3B-207ENST00000510866 KIR2DL5BA0A0G2JN68 375 aa5.32□□□□□ -1.56
KDM3B-207ENST00000510866 KIR2DL5BA0A0G2JPC4 375 aa5.32□□□□□ -1.56
KDM3B-207ENST00000510866 IGHV4-30-4P0DP06 118 aa5.32□□□□□ -1.56
KDM3B-207ENST00000510866 KIR2DL5AQ8N109 375 aa5.32□□□□□ -1.56
KDM3B-207ENST00000510866 KIR2DL5BQ8NHK3 375 aa5.32□□□□□ -1.56
KDM3B-207ENST00000510866 LINC00467Q9BRT7 94 aa5.32□□□□□ -1.56
KDM3B-207ENST00000510866 C11orf86A6NJI1 115 aa5.32□□□□□ -1.56
KDM3B-207ENST00000510866 NDUFV3P56181 108 aaKnown RBP5.32□□□□□ -1.56
KDM3B-207ENST00000510866 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.31□□□□□ -1.56
KDM3B-207ENST00000510866 NANOS2P60321 138 aaKnown RBP5.31□□□□□ -1.56
KDM3B-207ENST00000510866 TNRC6BQ9UPQ9 1833 aaKnown RBP5.31□□□□□ -1.56
KDM3B-207ENST00000510866 B9D2Q9BPU9 175 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms