RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 DPH3Q96FX2 82 aa9.96□□□□□ -0.82
RAB40C-202ENST00000509637 LINC01600Q96MT4 127 aa9.96□□□□□ -0.82
RAB40C-202ENST00000509637 PFDN1O60925 122 aa9.95□□□□□ -0.82
RAB40C-202ENST00000509637 H2AFB1P0C5Y9 115 aa9.95□□□□□ -0.82
RAB40C-202ENST00000509637 CENPWQ5EE01 88 aa9.95□□□□□ -0.82
RAB40C-202ENST00000509637 LYZL1Q6UWQ5 148 aa9.95□□□□□ -0.82
RAB40C-202ENST00000509637 PGLYRP4Q96LB8 373 aa9.95□□□□□ -0.82
RAB40C-202ENST00000509637 NIT2Q9NQR4 276 aa9.95□□□□□ -0.82
RAB40C-202ENST00000509637 NTF3P20783 257 aa9.94□□□□□ -0.82
RAB40C-202ENST00000509637 KRTAP10-8P60410 259 aa9.94□□□□□ -0.82
RAB40C-202ENST00000509637 EIF5AP63241 154 aaKnown RBP9.94□□□□□ -0.82
RAB40C-202ENST00000509637 UMAD1C9J7I0 102 aa9.93□□□□□ -0.82
RAB40C-202ENST00000509637 BCL2L11O43521 198 aa9.93□□□□□ -0.82
RAB40C-202ENST00000509637 GATD1Q8NB37 220 aa9.93□□□□□ -0.82
RAB40C-202ENST00000509637 AP5S1Q9NUS5 200 aa9.93□□□□□ -0.82
RAB40C-202ENST00000509637 A0A096LNI7 61 aa9.92□□□□□ -0.82
RAB40C-202ENST00000509637 TRAV26-2A0A0B4J265 109 aa9.92□□□□□ -0.82
RAB40C-202ENST00000509637 IGKV2-24A0A0C4DH68 120 aa9.92□□□□□ -0.82
RAB40C-202ENST00000509637 IGKV3OR2-268A0A0C4DH90 116 aa9.92□□□□□ -0.82
RAB40C-202ENST00000509637 FOXA3P55318 350 aaPredicted RBP9.92□□□□□ -0.82
RAB40C-202ENST00000509637 CACNG7P62955 275 aa9.92□□□□□ -0.82
RAB40C-202ENST00000509637 PRR3P79522 188 aaKnown RBP9.92□□□□□ -0.82
RAB40C-202ENST00000509637 MAJINQ3KP22 176 aa9.92□□□□□ -0.82
RAB40C-202ENST00000509637 GNG13Q9P2W3 67 aa9.92□□□□□ -0.82
RAB40C-202ENST00000509637 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.91□□□□□ -0.82
RAB40C-202ENST00000509637 H7C1H1 209 aa9.91□□□□□ -0.82
RAB40C-202ENST00000509637 RPS10P46783 165 aaKnown RBP9.91□□□□□ -0.82
RAB40C-202ENST00000509637 AMTP48728 403 aa9.91□□□□□ -0.82
RAB40C-202ENST00000509637 LYPD6BQ8NI32 183 aa9.91□□□□□ -0.82
RAB40C-202ENST00000509637 RPL39LQ96EH5 51 aaKnown RBP9.91□□□□□ -0.82
RAB40C-202ENST00000509637 LINC00526Q96FQ7 95 aa9.91□□□□□ -0.82
RAB40C-202ENST00000509637 SULT1A2P50226 295 aa9.9□□□□□ -0.82
RAB40C-202ENST00000509637 C9orf62Q8N4C0 152 aa9.9□□□□□ -0.82
RAB40C-202ENST00000509637 STPG4Q8N801 248 aa9.9□□□□□ -0.82
RAB40C-202ENST00000509637 GTSF1Q8WW33 167 aa9.9□□□□□ -0.82
RAB40C-202ENST00000509637 CHCHD10Q8WYQ3 142 aaPredicted RBP9.9□□□□□ -0.82
RAB40C-202ENST00000509637 DPH3P1Q9H4G8 78 aa9.9□□□□□ -0.82
RAB40C-202ENST00000509637 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.89□□□□□ -0.83
RAB40C-202ENST00000509637 TRAV1-1A0A0B4J248 108 aa9.89□□□□□ -0.83
RAB40C-202ENST00000509637 IGKV2-29A2NJV5 120 aaPredicted RBP9.89□□□□□ -0.83
RAB40C-202ENST00000509637 FAM231BA6NCW3 169 aa9.89□□□□□ -0.83
RAB40C-202ENST00000509637 NDUFS6O75380 124 aaKnown RBP9.89□□□□□ -0.83
RAB40C-202ENST00000509637 GAS8-AS1O95177 125 aa9.89□□□□□ -0.83
RAB40C-202ENST00000509637 RPS20P60866 119 aaKnown RBP9.89□□□□□ -0.83
RAB40C-202ENST00000509637 FOXI1Q12951 378 aa9.89□□□□□ -0.83
RAB40C-202ENST00000509637 SRSF9Q13242 221 aaKnown RBP eCLIP9.89□□□□□ -0.83
RAB40C-202ENST00000509637 NUDT10Q8NFP7 164 aa9.89□□□□□ -0.83
RAB40C-202ENST00000509637 NUDT11Q96G61 164 aa9.89□□□□□ -0.83
RAB40C-202ENST00000509637 GVQW2A0A096LPI5 108 aaPredicted RBP9.88□□□□□ -0.83
RAB40C-202ENST00000509637 A0A0J9YXV3 536 aa9.88□□□□□ -0.83
RAB40C-202ENST00000509637 F2Z2F3 143 aa9.88□□□□□ -0.83
RAB40C-202ENST00000509637 CTRLP40313 264 aa9.88□□□□□ -0.83
RAB40C-202ENST00000509637 COTL1Q14019 142 aa9.88□□□□□ -0.83
RAB40C-202ENST00000509637 EIF5AL1Q6IS14 154 aaKnown RBP9.88□□□□□ -0.83
RAB40C-202ENST00000509637 IFNA1P01562 189 aa9.87□□□□□ -0.83
RAB40C-202ENST00000509637 SLC51BQ86UW2 128 aa9.87□□□□□ -0.83
RAB40C-202ENST00000509637 CNFNQ9BYD5 112 aa9.87□□□□□ -0.83
RAB40C-202ENST00000509637 MANBALQ9NQG1 85 aa9.87□□□□□ -0.83
RAB40C-202ENST00000509637 K7EN84 100 aa9.86□□□□□ -0.83
RAB40C-202ENST00000509637 UBE2L6O14933 153 aa9.86□□□□□ -0.83
RAB40C-202ENST00000509637 TRGC1P0CF51 173 aa9.86□□□□□ -0.83
RAB40C-202ENST00000509637 WDR73Q6P4I2 378 aa9.86□□□□□ -0.83
RAB40C-202ENST00000509637 C7orf33Q8WU49 177 aa9.86□□□□□ -0.83
RAB40C-202ENST00000509637 GNG4P50150 75 aa9.85□□□□□ -0.83
RAB40C-202ENST00000509637 FGF6P10767 208 aa9.84□□□□□ -0.83
RAB40C-202ENST00000509637 TWIST1Q15672 202 aa9.84□□□□□ -0.83
RAB40C-202ENST00000509637 CFAP161Q6P656 301 aa9.84□□□□□ -0.83
RAB40C-202ENST00000509637 RNASE7Q9H1E1 156 aaKnown RBP9.84□□□□□ -0.83
RAB40C-202ENST00000509637 OCC1Q8TAD7 63 aa9.83□□□□□ -0.84
RAB40C-202ENST00000509637 SMIM12Q96EX1 92 aa9.83□□□□□ -0.84
RAB40C-202ENST00000509637 MED9Q9NWA0 146 aa9.83□□□□□ -0.84
RAB40C-202ENST00000509637 MEF2BQ02080 365 aaPredicted RBP9.82□□□□□ -0.84
RAB40C-202ENST00000509637 RNASEKQ6P5S7 137 aaKnown RBP9.82□□□□□ -0.84
RAB40C-202ENST00000509637 LPAP08519 4548 aa9.82□□□□□ -0.84
RAB40C-202ENST00000509637 LINC00959A0A1B0GUT2 108 aa9.81□□□□□ -0.84
RAB40C-202ENST00000509637 A0A1W2PNN7 141 aa9.81□□□□□ -0.84
RAB40C-202ENST00000509637 SDHAF1A6NFY7 115 aa9.81□□□□□ -0.84
RAB40C-202ENST00000509637 ESDP10768 282 aa9.81□□□□□ -0.84
RAB40C-202ENST00000509637 XCL1P47992 114 aa9.81□□□□□ -0.84
RAB40C-202ENST00000509637 SPINK6Q6UWN8 80 aa9.81□□□□□ -0.84
RAB40C-202ENST00000509637 XKRY2A2RUG3 117 aa9.8□□□□□ -0.84
RAB40C-202ENST00000509637 CCL25O15444 150 aa9.8□□□□□ -0.84
RAB40C-202ENST00000509637 AMMECR1LQ6DCA0 310 aa9.8□□□□□ -0.84
RAB40C-202ENST00000509637 OR5A1Q8NGJ0 315 aa9.8□□□□□ -0.84
RAB40C-202ENST00000509637 RPP21Q9H633 154 aaKnown RBP9.8□□□□□ -0.84
RAB40C-202ENST00000509637 NCR2O95944 276 aa9.79□□□□□ -0.84
RAB40C-202ENST00000509637 TSHBP01222 138 aa9.79□□□□□ -0.84
RAB40C-202ENST00000509637 BCL2P10415 239 aa9.79□□□□□ -0.84
RAB40C-202ENST00000509637 TEX46H3BTG2 121 aa9.78□□□□□ -0.84
RAB40C-202ENST00000509637 H7C423 109 aa9.78□□□□□ -0.84
RAB40C-202ENST00000509637 PDE6DO43924 150 aa9.78□□□□□ -0.84
RAB40C-202ENST00000509637 APCSP02743 223 aa9.78□□□□□ -0.84
RAB40C-202ENST00000509637 TMEM242Q9NWH2 141 aa9.77□□□□□ -0.85
RAB40C-202ENST00000509637 IGHV1-58A0A0C4DH39 117 aa9.76□□□□□ -0.85
RAB40C-202ENST00000509637 TRBV6-5A0A0K0K1A5 114 aa9.76□□□□□ -0.85
RAB40C-202ENST00000509637 CARD19Q96LW7 228 aa9.76□□□□□ -0.85
RAB40C-202ENST00000509637 CDC42SE2Q9NRR3 84 aa9.76□□□□□ -0.85
RAB40C-202ENST00000509637 PTTG1IPP53801 180 aa9.75□□□□□ -0.85
RAB40C-202ENST00000509637 POLR2KP53803 58 aaKnown RBP9.75□□□□□ -0.85
RAB40C-202ENST00000509637 SYCNQ0VAF6 134 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms