RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 IGKV3OR2-268A0A0C4DH90 116 aa8.32□□□□□ -1.08
DDX41-210ENST00000509576 ZNF345Q14585 488 aa8.32□□□□□ -1.08
DDX41-210ENST00000509576 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.32□□□□□ -1.08
DDX41-210ENST00000509576 GATD1Q8NB37 220 aa8.32□□□□□ -1.08
DDX41-210ENST00000509576 LINC00526Q96FQ7 95 aa8.32□□□□□ -1.08
DDX41-210ENST00000509576 NIT2Q9NQR4 276 aa8.32□□□□□ -1.08
DDX41-210ENST00000509576 UMAD1C9J7I0 102 aa8.31□□□□□ -1.08
DDX41-210ENST00000509576 PFDN1O60925 122 aa8.31□□□□□ -1.08
DDX41-210ENST00000509576 H2AFB1P0C5Y9 115 aa8.31□□□□□ -1.08
DDX41-210ENST00000509576 NTF3P20783 257 aa8.31□□□□□ -1.08
DDX41-210ENST00000509576 FOXA3P55318 350 aaPredicted RBP8.31□□□□□ -1.08
DDX41-210ENST00000509576 MAJINQ3KP22 176 aa8.31□□□□□ -1.08
DDX41-210ENST00000509576 RPL39LQ96EH5 51 aaKnown RBP8.31□□□□□ -1.08
DDX41-210ENST00000509576 DPH3Q96FX2 82 aa8.31□□□□□ -1.08
DDX41-210ENST00000509576 AP5S1Q9NUS5 200 aa8.31□□□□□ -1.08
DDX41-210ENST00000509576 GVQW2A0A096LPI5 108 aaPredicted RBP8.3□□□□□ -1.08
DDX41-210ENST00000509576 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.3□□□□□ -1.08
DDX41-210ENST00000509576 A0A0J9YXV3 536 aa8.3□□□□□ -1.08
DDX41-210ENST00000509576 H7C1H1 209 aa8.3□□□□□ -1.08
DDX41-210ENST00000509576 NDUFS6O75380 124 aaKnown RBP8.3□□□□□ -1.08
DDX41-210ENST00000509576 GAS8-AS1O95177 125 aa8.3□□□□□ -1.08
DDX41-210ENST00000509576 CTRLP40313 264 aa8.3□□□□□ -1.08
DDX41-210ENST00000509576 RPS10P46783 165 aaKnown RBP8.3□□□□□ -1.08
DDX41-210ENST00000509576 AMTP48728 403 aa8.3□□□□□ -1.08
DDX41-210ENST00000509576 FOXI1Q12951 378 aa8.3□□□□□ -1.08
DDX41-210ENST00000509576 SRSF9Q13242 221 aaKnown RBP eCLIP8.3□□□□□ -1.08
DDX41-210ENST00000509576 STPG4Q8N801 248 aa8.3□□□□□ -1.08
DDX41-210ENST00000509576 LYPD6BQ8NI32 183 aa8.3□□□□□ -1.08
DDX41-210ENST00000509576 CHCHD10Q8WYQ3 142 aaPredicted RBP8.3□□□□□ -1.08
DDX41-210ENST00000509576 GNG13Q9P2W3 67 aa8.3□□□□□ -1.08
DDX41-210ENST00000509576 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.29□□□□□ -1.08
DDX41-210ENST00000509576 IGKV2-29A2NJV5 120 aaPredicted RBP8.29□□□□□ -1.08
DDX41-210ENST00000509576 BCL2L11O43521 198 aa8.29□□□□□ -1.08
DDX41-210ENST00000509576 CACNG7P62955 275 aa8.29□□□□□ -1.08
DDX41-210ENST00000509576 WDR73Q6P4I2 378 aa8.29□□□□□ -1.08
DDX41-210ENST00000509576 GTSF1Q8WW33 167 aa8.29□□□□□ -1.08
DDX41-210ENST00000509576 CNFNQ9BYD5 112 aa8.29□□□□□ -1.08
DDX41-210ENST00000509576 DPH3P1Q9H4G8 78 aa8.29□□□□□ -1.08
DDX41-210ENST00000509576 FAM231BA6NCW3 169 aa8.28□□□□□ -1.08
DDX41-210ENST00000509576 SULT1A2P50226 295 aa8.28□□□□□ -1.08
DDX41-210ENST00000509576 COTL1Q14019 142 aa8.28□□□□□ -1.08
DDX41-210ENST00000509576 C9orf62Q8N4C0 152 aa8.28□□□□□ -1.08
DDX41-210ENST00000509576 TRAV1-1A0A0B4J248 108 aa8.27□□□□□ -1.09
DDX41-210ENST00000509576 HMSDA8MTL9 139 aa8.27□□□□□ -1.09
DDX41-210ENST00000509576 K7EN84 100 aa8.27□□□□□ -1.09
DDX41-210ENST00000509576 RPS20P60866 119 aaKnown RBP8.27□□□□□ -1.09
DDX41-210ENST00000509576 NUDT10Q8NFP7 164 aa8.27□□□□□ -1.09
DDX41-210ENST00000509576 C7orf33Q8WU49 177 aa8.27□□□□□ -1.09
DDX41-210ENST00000509576 NUDT11Q96G61 164 aa8.27□□□□□ -1.09
DDX41-210ENST00000509576 UBE2L6O14933 153 aa8.26□□□□□ -1.09
DDX41-210ENST00000509576 TRGC1P0CF51 173 aa8.26□□□□□ -1.09
DDX41-210ENST00000509576 MANBALQ9NQG1 85 aa8.26□□□□□ -1.09
DDX41-210ENST00000509576 F2Z2F3 143 aa8.25□□□□□ -1.09
DDX41-210ENST00000509576 IFNA1P01562 189 aa8.25□□□□□ -1.09
DDX41-210ENST00000509576 FGF6P10767 208 aa8.25□□□□□ -1.09
DDX41-210ENST00000509576 GNG4P50150 75 aa8.25□□□□□ -1.09
DDX41-210ENST00000509576 RNASE7Q9H1E1 156 aaKnown RBP8.25□□□□□ -1.09
DDX41-210ENST00000509576 BATF3Q9NR55 127 aa8.24□□□□□ -1.09
DDX41-210ENST00000509576 ESDP10768 282 aa8.23□□□□□ -1.09
DDX41-210ENST00000509576 XCL1P47992 114 aa8.23□□□□□ -1.09
DDX41-210ENST00000509576 MEF2BQ02080 365 aaPredicted RBP8.23□□□□□ -1.09
DDX41-210ENST00000509576 TWIST1Q15672 202 aa8.23□□□□□ -1.09
DDX41-210ENST00000509576 SPINK6Q6UWN8 80 aa8.23□□□□□ -1.09
DDX41-210ENST00000509576 SMIM12Q96EX1 92 aa8.23□□□□□ -1.09
DDX41-210ENST00000509576 LINC00959A0A1B0GUT2 108 aa8.22□□□□□ -1.09
DDX41-210ENST00000509576 A0A1W2PNN7 141 aa8.22□□□□□ -1.09
DDX41-210ENST00000509576 KANTRA0A1W2PQU2 76 aa8.22□□□□□ -1.09
DDX41-210ENST00000509576 SDHAF1A6NFY7 115 aa8.22□□□□□ -1.09
DDX41-210ENST00000509576 CCL25O15444 150 aa8.22□□□□□ -1.09
DDX41-210ENST00000509576 TSHBP01222 138 aa8.22□□□□□ -1.09
DDX41-210ENST00000509576 RGS21Q2M5E4 152 aa8.22□□□□□ -1.09
DDX41-210ENST00000509576 RNASEKQ6P5S7 137 aaKnown RBP8.22□□□□□ -1.09
DDX41-210ENST00000509576 CFAP161Q6P656 301 aa8.22□□□□□ -1.09
DDX41-210ENST00000509576 OR5A1Q8NGJ0 315 aa8.22□□□□□ -1.09
DDX41-210ENST00000509576 OCC1Q8TAD7 63 aa8.21□□□□□ -1.1
DDX41-210ENST00000509576 RPP21Q9H633 154 aaKnown RBP8.21□□□□□ -1.1
DDX41-210ENST00000509576 MED9Q9NWA0 146 aa8.21□□□□□ -1.1
DDX41-210ENST00000509576 NCR2O95944 276 aa8.2□□□□□ -1.1
DDX41-210ENST00000509576 APCSP02743 223 aa8.2□□□□□ -1.1
DDX41-210ENST00000509576 BCL2P10415 239 aa8.2□□□□□ -1.1
DDX41-210ENST00000509576 AMMECR1LQ6DCA0 310 aa8.2□□□□□ -1.1
DDX41-210ENST00000509576 CARD19Q96LW7 228 aa8.2□□□□□ -1.1
DDX41-210ENST00000509576 XKRY2A2RUG3 117 aa8.19□□□□□ -1.1
DDX41-210ENST00000509576 H7C423 109 aa8.19□□□□□ -1.1
DDX41-210ENST00000509576 KRTAP11-1Q8IUC1 163 aa8.19□□□□□ -1.1
DDX41-210ENST00000509576 TMEM242Q9NWH2 141 aa8.19□□□□□ -1.1
DDX41-210ENST00000509576 IGHV1-58A0A0C4DH39 117 aa8.18□□□□□ -1.1
DDX41-210ENST00000509576 TRBV6-5A0A0K0K1A5 114 aa8.18□□□□□ -1.1
DDX41-210ENST00000509576 PDE6DO43924 150 aa8.18□□□□□ -1.1
DDX41-210ENST00000509576 PTTG1IPP53801 180 aa8.18□□□□□ -1.1
DDX41-210ENST00000509576 CDC42SE2Q9NRR3 84 aa8.18□□□□□ -1.1
DDX41-210ENST00000509576 Q6ZRP5 223 aa8.17□□□□□ -1.1
DDX41-210ENST00000509576 I3L3M4 83 aa8.16□□□□□ -1.1
DDX41-210ENST00000509576 ZNF25P17030 456 aaPredicted RBP8.16□□□□□ -1.1
DDX41-210ENST00000509576 POLR2KP53803 58 aaKnown RBP8.16□□□□□ -1.1
DDX41-210ENST00000509576 SYCNQ0VAF6 134 aa8.16□□□□□ -1.1
DDX41-210ENST00000509576 REG3GQ6UW15 175 aa8.16□□□□□ -1.1
DDX41-210ENST00000509576 PSORS1C2Q9UIG4 136 aa8.16□□□□□ -1.1
DDX41-210ENST00000509576 IGLV4-69A0A075B6H9 119 aa8.15□□□□□ -1.1
DDX41-210ENST00000509576 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms