RNA–Protein interactions for RNA: ENST00000508800.1

NEDD9-212, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-212ENST00000508800 APOMO95445 188 aa6.65□□□□□ -1.34
NEDD9-212ENST00000508800 PET100P0DJ07 73 aa6.65□□□□□ -1.34
NEDD9-212ENST00000508800 UBE2G1P62253 170 aa6.65□□□□□ -1.34
NEDD9-212ENST00000508800 LRRC37A5PQ49AS3 106 aa6.65□□□□□ -1.34
NEDD9-212ENST00000508800 AMMECR1LQ6DCA0 310 aa6.65□□□□□ -1.34
NEDD9-212ENST00000508800 LINC00526Q96FQ7 95 aa6.65□□□□□ -1.34
NEDD9-212ENST00000508800 IGLV4-69A0A075B6H9 119 aa6.64□□□□□ -1.35
NEDD9-212ENST00000508800 H0YIZ8 118 aa6.64□□□□□ -1.35
NEDD9-212ENST00000508800 MBP02144 154 aa6.64□□□□□ -1.35
NEDD9-212ENST00000508800 H7C423 109 aa6.63□□□□□ -1.35
NEDD9-212ENST00000508800 LYRM1O43325 122 aa6.63□□□□□ -1.35
NEDD9-212ENST00000508800 CRYGAP11844 174 aa6.63□□□□□ -1.35
NEDD9-212ENST00000508800 XCL1P47992 114 aa6.63□□□□□ -1.35
NEDD9-212ENST00000508800 NKX2-5P52952 324 aaPredicted RBP6.63□□□□□ -1.35
NEDD9-212ENST00000508800 RASL11AQ6T310 242 aa6.63□□□□□ -1.35
NEDD9-212ENST00000508800 SMIM3Q9BZL3 60 aa6.63□□□□□ -1.35
NEDD9-212ENST00000508800 LTAP01374 205 aa6.62□□□□□ -1.35
NEDD9-212ENST00000508800 MGPP08493 103 aa6.62□□□□□ -1.35
NEDD9-212ENST00000508800 H2AFB2P0C5Z0 115 aa6.62□□□□□ -1.35
NEDD9-212ENST00000508800 BCL2P10415 239 aa6.62□□□□□ -1.35
NEDD9-212ENST00000508800 IL7P13232 177 aa6.62□□□□□ -1.35
NEDD9-212ENST00000508800 ZNF25P17030 456 aaPredicted RBP6.62□□□□□ -1.35
NEDD9-212ENST00000508800 RPL18AQ02543 176 aaKnown RBP6.62□□□□□ -1.35
NEDD9-212ENST00000508800 SUMO4Q6EEV6 95 aa6.62□□□□□ -1.35
NEDD9-212ENST00000508800 EIF5AL1Q6IS14 154 aaKnown RBP6.62□□□□□ -1.35
NEDD9-212ENST00000508800 NUP35Q8NFH5 326 aa6.62□□□□□ -1.35
NEDD9-212ENST00000508800 OR5A1Q8NGJ0 315 aa6.62□□□□□ -1.35
NEDD9-212ENST00000508800 TCEAL7Q9BRU2 100 aa6.62□□□□□ -1.35
NEDD9-212ENST00000508800 RPP21Q9H633 154 aaKnown RBP6.62□□□□□ -1.35
NEDD9-212ENST00000508800 NIT2Q9NQR4 276 aa6.62□□□□□ -1.35
NEDD9-212ENST00000508800 KRTAP9-7A8MTY7 169 aa6.61□□□□□ -1.35
NEDD9-212ENST00000508800 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.61□□□□□ -1.35
NEDD9-212ENST00000508800 MEF2BQ02080 365 aaPredicted RBP6.61□□□□□ -1.35
NEDD9-212ENST00000508800 PSMG3Q9BT73 122 aaPredicted RBP6.61□□□□□ -1.35
NEDD9-212ENST00000508800 ACTR3CQ9C0K3 210 aaPredicted RBP6.61□□□□□ -1.35
NEDD9-212ENST00000508800 CCL25O15444 150 aa6.6□□□□□ -1.35
NEDD9-212ENST00000508800 SERF2P84101 59 aa6.6□□□□□ -1.35
NEDD9-212ENST00000508800 RNASEKQ6P5S7 137 aaKnown RBP6.6□□□□□ -1.35
NEDD9-212ENST00000508800 CD164L2Q6UWJ8 174 aa6.6□□□□□ -1.35
NEDD9-212ENST00000508800 PPP1R1CQ8WVI7 109 aa6.6□□□□□ -1.35
NEDD9-212ENST00000508800 C2orf48Q96LS8 159 aa6.6□□□□□ -1.35
NEDD9-212ENST00000508800 CAMK2N2Q96S95 79 aa6.6□□□□□ -1.35
NEDD9-212ENST00000508800 MUC21A0A140T8X8 626 aa6.59□□□□□ -1.35
NEDD9-212ENST00000508800 LINC00959A0A1B0GUT2 108 aa6.59□□□□□ -1.35
NEDD9-212ENST00000508800 PLA2G10O15496 165 aa6.59□□□□□ -1.35
NEDD9-212ENST00000508800 SIX6O95475 246 aa6.59□□□□□ -1.35
NEDD9-212ENST00000508800 NCR2O95944 276 aa6.59□□□□□ -1.35
NEDD9-212ENST00000508800 RNF151Q2KHN1 245 aa6.59□□□□□ -1.35
NEDD9-212ENST00000508800 IGLV7-46A0A075B6I9 117 aa6.58□□□□□ -1.36
NEDD9-212ENST00000508800 FAM74A7A6NL05 159 aa6.58□□□□□ -1.36
NEDD9-212ENST00000508800 MPC2O95563 127 aa6.58□□□□□ -1.36
NEDD9-212ENST00000508800 ESDP10768 282 aa6.58□□□□□ -1.36
NEDD9-212ENST00000508800 UBE2G2P60604 165 aa6.58□□□□□ -1.36
NEDD9-212ENST00000508800 CTAG1AP78358 180 aa6.58□□□□□ -1.36
NEDD9-212ENST00000508800 SS18Q15532 418 aa6.58□□□□□ -1.36
NEDD9-212ENST00000508800 TYMSOSQ8TAI1 123 aa6.58□□□□□ -1.36
NEDD9-212ENST00000508800 TMEM101Q96IK0 257 aa6.58□□□□□ -1.36
NEDD9-212ENST00000508800 BTF3L4Q96K17 158 aa6.58□□□□□ -1.36
NEDD9-212ENST00000508800 WFDC1Q9HC57 220 aa6.58□□□□□ -1.36
NEDD9-212ENST00000508800 TNFSF18Q9UNG2 199 aa6.58□□□□□ -1.36
NEDD9-212ENST00000508800 C19orf71A6NCJ1 209 aa6.57□□□□□ -1.36
NEDD9-212ENST00000508800 CCDC160A6NGH7 325 aa6.57□□□□□ -1.36
NEDD9-212ENST00000508800 MALP21145 153 aa6.57□□□□□ -1.36
NEDD9-212ENST00000508800 SSTP61278 116 aa6.57□□□□□ -1.36
NEDD9-212ENST00000508800 CCDC32Q9BV29 185 aa6.57□□□□□ -1.36
NEDD9-212ENST00000508800 APCSP02743 223 aa6.56□□□□□ -1.36
NEDD9-212ENST00000508800 NTF3P20783 257 aa6.56□□□□□ -1.36
NEDD9-212ENST00000508800 ATP6V0CP27449 155 aa6.56□□□□□ -1.36
NEDD9-212ENST00000508800 UBE2BP63146 152 aa6.56□□□□□ -1.36
NEDD9-212ENST00000508800 KRTAP11-1Q8IUC1 163 aa6.56□□□□□ -1.36
NEDD9-212ENST00000508800 IMMP2LQ96T52 175 aa6.56□□□□□ -1.36
NEDD9-212ENST00000508800 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.55□□□□□ -1.36
NEDD9-212ENST00000508800 IGKV2-29A2NJV5 120 aaPredicted RBP6.55□□□□□ -1.36
NEDD9-212ENST00000508800 COX7A2LO14548 114 aa6.55□□□□□ -1.36
NEDD9-212ENST00000508800 BCL2L11O43521 198 aa6.55□□□□□ -1.36
NEDD9-212ENST00000508800 ZNF861PO60384 105 aa6.55□□□□□ -1.36
NEDD9-212ENST00000508800 S100A9P06702 114 aaKnown RBP6.55□□□□□ -1.36
NEDD9-212ENST00000508800 TRGC1P0CF51 173 aa6.55□□□□□ -1.36
NEDD9-212ENST00000508800 AKR1C3P42330 323 aa6.55□□□□□ -1.36
NEDD9-212ENST00000508800 FHITP49789 147 aa6.55□□□□□ -1.36
NEDD9-212ENST00000508800 DEFA3P59666 94 aa6.55□□□□□ -1.36
NEDD9-212ENST00000508800 RETNLBQ9BQ08 111 aa6.55□□□□□ -1.36
NEDD9-212ENST00000508800 CTXND1A0A1B0GTU2 59 aa6.54□□□□□ -1.36
NEDD9-212ENST00000508800 FAM240BA0A1B0GVZ2 78 aa6.54□□□□□ -1.36
NEDD9-212ENST00000508800 CFC1BP0CG36 223 aa6.54□□□□□ -1.36
NEDD9-212ENST00000508800 LORP23490 312 aaPredicted RBP6.54□□□□□ -1.36
NEDD9-212ENST00000508800 H2BFSP57053 126 aa6.54□□□□□ -1.36
NEDD9-212ENST00000508800 ASB16-AS1Q495Z4 193 aa6.54□□□□□ -1.36
NEDD9-212ENST00000508800 LINC00173Q6ZV60 143 aa6.54□□□□□ -1.36
NEDD9-212ENST00000508800 STOML3Q8TAV4 291 aa6.54□□□□□ -1.36
NEDD9-212ENST00000508800 A0A087X002 238 aa6.53□□□□□ -1.36
NEDD9-212ENST00000508800 F8WDY8 70 aa6.53□□□□□ -1.36
NEDD9-212ENST00000508800 M0QXV9 152 aa6.53□□□□□ -1.36
NEDD9-212ENST00000508800 FAM19A5Q7Z5A7 132 aaPredicted RBP6.53□□□□□ -1.36
NEDD9-212ENST00000508800 OR2D3Q8NGH3 330 aa6.53□□□□□ -1.36
NEDD9-212ENST00000508800 FAM210AQ96ND0 272 aa6.53□□□□□ -1.36
NEDD9-212ENST00000508800 FAM168BA1KXE4 195 aa6.52□□□□□ -1.37
NEDD9-212ENST00000508800 C1orf196B1AJZ1 125 aa6.52□□□□□ -1.37
NEDD9-212ENST00000508800 G3V3Q6 166 aa6.52□□□□□ -1.37
NEDD9-212ENST00000508800 TLX1NBP0CAT3 122 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms