RNA–Protein interactions for RNA: ENST00000507906.5

USP53-204, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 4

Gene USP53, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-204ENST00000507906 C22orf24Q9Y442 160 aa1.23□□□□□ -2.21
USP53-204ENST00000507906 ESPL1Q14674 2120 aa1.22□□□□□ -2.21
USP53-204ENST00000507906 HELZ2Q9BYK8 2649 aaKnown RBP1.22□□□□□ -2.21
USP53-204ENST00000507906 RP1L1Q8IWN7 2480 aaPredicted RBP1.22□□□□□ -2.21
USP53-204ENST00000507906 TRBV27A0A0K0K1C4 114 aa1.22□□□□□ -2.21
USP53-204ENST00000507906 SPAARA0A1B0GVQ0 90 aa1.22□□□□□ -2.21
USP53-204ENST00000507906 A0A1W2PRS3 328 aa1.22□□□□□ -2.21
USP53-204ENST00000507906 F8W1H4 67 aa1.22□□□□□ -2.21
USP53-204ENST00000507906 H3BQ15 152 aa1.22□□□□□ -2.21
USP53-204ENST00000507906 J3KT08 172 aa1.22□□□□□ -2.21
USP53-204ENST00000507906 K7ERU9 68 aa1.22□□□□□ -2.21
USP53-204ENST00000507906 CCL22O00626 93 aa1.22□□□□□ -2.21
USP53-204ENST00000507906 PIN1P1O15428 100 aa1.22□□□□□ -2.21
USP53-204ENST00000507906 NUPR1O60356 82 aa1.22□□□□□ -2.21
USP53-204ENST00000507906 KLF7O75840 302 aaPredicted RBP1.22□□□□□ -2.21
USP53-204ENST00000507906 IGLC1P0CG04 106 aa1.22□□□□□ -2.21
USP53-204ENST00000507906 AKAIN1P0CW23 69 aa1.22□□□□□ -2.21
USP53-204ENST00000507906 IGLC2P0DOY2 106 aa1.22□□□□□ -2.21
USP53-204ENST00000507906 IGLC3P0DOY3 106 aa1.22□□□□□ -2.21
USP53-204ENST00000507906 FAUP35544 74 aaKnown RBP1.22□□□□□ -2.21
USP53-204ENST00000507906 FOXA3P55318 350 aaPredicted RBP1.22□□□□□ -2.21
USP53-204ENST00000507906 SSBP1Q04837 148 aaKnown RBP1.22□□□□□ -2.21
USP53-204ENST00000507906 KRTAP21-3Q3LHN1 58 aa1.22□□□□□ -2.21
USP53-204ENST00000507906 VMA21Q3ZAQ7 101 aa1.22□□□□□ -2.21
USP53-204ENST00000507906 RPL7L1Q6DKI1 246 aaKnown RBP1.22□□□□□ -2.21
USP53-204ENST00000507906 TMEM229BQ8NBD8 167 aa1.22□□□□□ -2.21
USP53-204ENST00000507906 MORN4Q8NDC4 146 aa1.22□□□□□ -2.21
USP53-204ENST00000507906 BRK1Q8WUW1 75 aa1.22□□□□□ -2.21
USP53-204ENST00000507906 C4orf3Q8WVX3 66 aa1.22□□□□□ -2.21
USP53-204ENST00000507906 CLEC2BQ92478 149 aa1.22□□□□□ -2.21
USP53-204ENST00000507906 PRELID3AQ96N28 172 aa1.22□□□□□ -2.21
USP53-204ENST00000507906 ODF3Q96PU9 254 aa1.22□□□□□ -2.21
USP53-204ENST00000507906 NMES1Q9C002 83 aa1.22□□□□□ -2.21
USP53-204ENST00000507906 SLC35B3Q9H1N7 401 aa1.22□□□□□ -2.21
USP53-204ENST00000507906 CMC2Q9NRP2 79 aa1.22□□□□□ -2.21
USP53-204ENST00000507906 TMEM242Q9NWH2 141 aa1.22□□□□□ -2.21
USP53-204ENST00000507906 TAS2R8Q9NYW2 309 aa1.22□□□□□ -2.21
USP53-204ENST00000507906 BPTFQ12830 3046 aa1.22□□□□□ -2.21
USP53-204ENST00000507906 INTS1Q8N201 2190 aaKnown RBP1.21□□□□□ -2.22
USP53-204ENST00000507906 TRAV13-1A0A0B4J241 112 aa1.21□□□□□ -2.22
USP53-204ENST00000507906 IFITM5A6NNB3 132 aa1.21□□□□□ -2.22
USP53-204ENST00000507906 GNG7O60262 68 aa1.21□□□□□ -2.22
USP53-204ENST00000507906 ANGP03950 147 aaKnown RBP1.21□□□□□ -2.22
USP53-204ENST00000507906 CD3DP04234 171 aa1.21□□□□□ -2.22
USP53-204ENST00000507906 IL9P15248 144 aa1.21□□□□□ -2.22
USP53-204ENST00000507906 S100A10P60903 97 aa1.21□□□□□ -2.22
USP53-204ENST00000507906 CKS1BP61024 79 aa1.21□□□□□ -2.22
USP53-204ENST00000507906 MIR22HGQ0VDD5 57 aa1.21□□□□□ -2.22
USP53-204ENST00000507906 OR8B8Q15620 311 aa1.21□□□□□ -2.22
USP53-204ENST00000507906 SPATA45Q537H7 98 aa1.21□□□□□ -2.22
USP53-204ENST00000507906 GDF5OSQ5U4N7 250 aa1.21□□□□□ -2.22
USP53-204ENST00000507906 FOXI2Q6ZQN5 318 aa1.21□□□□□ -2.22
USP53-204ENST00000507906 COMMD6Q7Z4G1 85 aa1.21□□□□□ -2.22
USP53-204ENST00000507906 DEFB106AQ8N104 65 aa1.21□□□□□ -2.22
USP53-204ENST00000507906 C5orf17Q8NAS9 161 aa1.21□□□□□ -2.22
USP53-204ENST00000507906 OR4B1Q8NGF8 309 aa1.21□□□□□ -2.22
USP53-204ENST00000507906 SKA2Q8WVK7 121 aaPredicted RBP1.21□□□□□ -2.22
USP53-204ENST00000507906 CIB3Q96Q77 187 aaPredicted RBP1.21□□□□□ -2.22
USP53-204ENST00000507906 OR4C12Q96R67 309 aa1.21□□□□□ -2.22
USP53-204ENST00000507906 WFDC6Q9BQY6 131 aa1.21□□□□□ -2.22
USP53-204ENST00000507906 VAMP8Q9BV40 100 aa1.21□□□□□ -2.22
USP53-204ENST00000507906 CST11Q9H112 138 aa1.21□□□□□ -2.22
USP53-204ENST00000507906 UQCR10Q9UDW1 63 aa1.21□□□□□ -2.22
USP53-204ENST00000507906 CRCT1Q9UGL9 99 aa1.21□□□□□ -2.22
USP53-204ENST00000507906 JPT1Q9UK76 154 aa1.21□□□□□ -2.22
USP53-204ENST00000507906 NOP16Q9Y3C1 178 aaKnown RBP1.21□□□□□ -2.22
USP53-204ENST00000507906 ARFGEF3Q5TH69 2177 aa1.21□□□□□ -2.22
USP53-204ENST00000507906 MED13Q9UHV7 2174 aa1.21□□□□□ -2.22
USP53-204ENST00000507906 MUC22E2RYF6 1773 aaPredicted RBP1.21□□□□□ -2.22
USP53-204ENST00000507906 TET1Q8NFU7 2136 aa1.21□□□□□ -2.22
USP53-204ENST00000507906 USF3Q68DE3 2245 aa1.2□□□□□ -2.22
USP53-204ENST00000507906 MED12Q93074 2177 aa1.2□□□□□ -2.22
USP53-204ENST00000507906 TMEM189A5PLL7 270 aa1.2□□□□□ -2.22
USP53-204ENST00000507906 LOC730098B7Z3J9 87 aa1.2□□□□□ -2.22
USP53-204ENST00000507906 SFT2D2O95562 160 aa1.2□□□□□ -2.22
USP53-204ENST00000507906 CRYGSP22914 178 aa1.2□□□□□ -2.22
USP53-204ENST00000507906 SMIM11AP58511 58 aa1.2□□□□□ -2.22
USP53-204ENST00000507906 FXYD6P3P58550 94 aa1.2□□□□□ -2.22
USP53-204ENST00000507906 TPPP2P59282 170 aa1.2□□□□□ -2.22
USP53-204ENST00000507906 PSG9Q00887 426 aa1.2□□□□□ -2.22
USP53-204ENST00000507906 HSD52Q0P140 79 aa1.2□□□□□ -2.22
USP53-204ENST00000507906 BVES-AS1Q5T3Y7 98 aa1.2□□□□□ -2.22
USP53-204ENST00000507906 FAM213BQ8TBF2 198 aa1.2□□□□□ -2.22
USP53-204ENST00000507906 S100A16Q96FQ6 103 aaKnown RBP1.2□□□□□ -2.22
USP53-204ENST00000507906 KRTAP4-1Q9BYQ7 146 aa1.2□□□□□ -2.22
USP53-204ENST00000507906 LINC00470Q9BZP3 86 aa1.2□□□□□ -2.22
USP53-204ENST00000507906 LPAR5Q9H1C0 372 aa1.2□□□□□ -2.22
USP53-204ENST00000507906 NPVFQ9HCQ7 196 aa1.2□□□□□ -2.22
USP53-204ENST00000507906 MANBALQ9NQG1 85 aa1.2□□□□□ -2.22
USP53-204ENST00000507906 BET1LQ9NYM9 111 aa1.2□□□□□ -2.22
USP53-204ENST00000507906 KNTC1P50748 2209 aa1.2□□□□□ -2.22
USP53-204ENST00000507906 TRAV36DV7A0A075B6V5 113 aa1.19□□□□□ -2.22
USP53-204ENST00000507906 BORCS7-ASMTA0A0B4J1R7 106 aa1.19□□□□□ -2.22
USP53-204ENST00000507906 A0A0G2JMM0 328 aa1.19□□□□□ -2.22
USP53-204ENST00000507906 A0A1W2PPB8 328 aa1.19□□□□□ -2.22
USP53-204ENST00000507906 KIR3DP1A8MWS1 328 aa1.19□□□□□ -2.22
USP53-204ENST00000507906 F2Z2F3 143 aa1.19□□□□□ -2.22
USP53-204ENST00000507906 H3BMG7 143 aa1.19□□□□□ -2.22
USP53-204ENST00000507906 J3QLW9 94 aa1.19□□□□□ -2.22
USP53-204ENST00000507906 PITX3O75364 302 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms