RNA–Protein interactions for RNA: ENST00000507900.5

DDX41-207, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 1,564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-207ENST00000507900 LURAP1LQ8IV03 231 aa11.76□□□□□ -0.53
DDX41-207ENST00000507900 MRPL35Q9NZE8 188 aaKnown RBP11.76□□□□□ -0.53
DDX41-207ENST00000507900 PLNP26678 52 aa11.75□□□□□ -0.53
DDX41-207ENST00000507900 DEFA6Q01524 100 aa11.75□□□□□ -0.53
DDX41-207ENST00000507900 FHL2Q14192 279 aa11.75□□□□□ -0.53
DDX41-207ENST00000507900 DAZ4Q86SG3 579 aaKnown RBP11.75□□□□□ -0.53
DDX41-207ENST00000507900 ZNRF2Q8NHG8 242 aa11.75□□□□□ -0.53
DDX41-207ENST00000507900 C14orf144Q96I85 54 aa11.75□□□□□ -0.53
DDX41-207ENST00000507900 CHCHD7Q9BUK0 85 aa11.75□□□□□ -0.53
DDX41-207ENST00000507900 DAZ3Q9NR90 486 aaKnown RBP11.75□□□□□ -0.53
DDX41-207ENST00000507900 HHLA3Q9XRX5 114 aa11.75□□□□□ -0.53
DDX41-207ENST00000507900 PYGO1Q9Y3Y4 419 aa11.75□□□□□ -0.53
DDX41-207ENST00000507900 NPSP0C0P6 89 aa11.75□□□□□ -0.53
DDX41-207ENST00000507900 UBE2D3P61077 147 aa11.75□□□□□ -0.53
DDX41-207ENST00000507900 UBE2D2P62837 147 aa11.75□□□□□ -0.53
DDX41-207ENST00000507900 COTL1Q14019 142 aa11.75□□□□□ -0.53
DDX41-207ENST00000507900 Q8NAQ8 132 aa11.75□□□□□ -0.53
DDX41-207ENST00000507900 TRGV4A0A0C4DH28 118 aa11.74□□□□□ -0.53
DDX41-207ENST00000507900 IGHV4-28A0A0C4DH34 117 aa11.74□□□□□ -0.53
DDX41-207ENST00000507900 PMVKQ15126 192 aa11.74□□□□□ -0.53
DDX41-207ENST00000507900 ANKRD39Q53RE8 183 aa11.74□□□□□ -0.53
DDX41-207ENST00000507900 SAMD5Q5TGI4 173 aa11.74□□□□□ -0.53
DDX41-207ENST00000507900 CHTOPQ9Y3Y2 248 aaKnown RBP11.74□□□□□ -0.53
DDX41-207ENST00000507900 PRSS29PA6NIE9 313 aa11.73□□□□□ -0.53
DDX41-207ENST00000507900 FAM222AQ5U5X8 452 aa11.73□□□□□ -0.53
DDX41-207ENST00000507900 PHLDA1Q8WV24 401 aaPredicted RBP11.73□□□□□ -0.53
DDX41-207ENST00000507900 CMYA5Q8N3K9 4069 aa11.73□□□□□ -0.53
DDX41-207ENST00000507900 DEFB130BP0DP73 79 aa11.72□□□□□ -0.53
DDX41-207ENST00000507900 DEFB130AP0DP74 79 aa11.72□□□□□ -0.53
DDX41-207ENST00000507900 MRPL52Q86TS9 123 aaKnown RBP11.72□□□□□ -0.53
DDX41-207ENST00000507900 STPG4Q8N801 248 aa11.72□□□□□ -0.53
DDX41-207ENST00000507900 CST9LQ9H4G1 147 aa11.72□□□□□ -0.53
DDX41-207ENST00000507900 IGHV3-38A0A0C4DH36 116 aa11.71□□□□□ -0.53
DDX41-207ENST00000507900 G3V4G9 280 aa11.71□□□□□ -0.53
DDX41-207ENST00000507900 LINC00694P0DN24 101 aa11.71□□□□□ -0.53
DDX41-207ENST00000507900 COX8AP10176 69 aa11.71□□□□□ -0.53
DDX41-207ENST00000507900 CRYBA4P53673 196 aa11.71□□□□□ -0.53
DDX41-207ENST00000507900 GAGE12JA6NER3 117 aa11.71□□□□□ -0.54
DDX41-207ENST00000507900 GAGE1Q13065 139 aa11.71□□□□□ -0.54
DDX41-207ENST00000507900 GAGE4Q13068 117 aa11.71□□□□□ -0.54
DDX41-207ENST00000507900 GAGE5Q13069 117 aa11.71□□□□□ -0.54
DDX41-207ENST00000507900 GAGE13Q4V321 117 aa11.71□□□□□ -0.54
DDX41-207ENST00000507900 PRADC1Q9BSG0 188 aa11.71□□□□□ -0.54
DDX41-207ENST00000507900 SPANXA1Q9NS26 97 aa11.71□□□□□ -0.54
DDX41-207ENST00000507900 IGLV4-3A0A075B6K6 122 aa11.7□□□□□ -0.54
DDX41-207ENST00000507900 PAPPA-AS1Q5QFB9 102 aa11.7□□□□□ -0.54
DDX41-207ENST00000507900 SLC25A34Q6PIV7 304 aa11.7□□□□□ -0.54
DDX41-207ENST00000507900 GTSF1LQ9H1H1 148 aa11.7□□□□□ -0.54
DDX41-207ENST00000507900 UBE2D4Q9Y2X8 147 aa11.7□□□□□ -0.54
DDX41-207ENST00000507900 IGLV4-69A0A075B6H9 119 aa11.69□□□□□ -0.54
DDX41-207ENST00000507900 HNRNPA3P51991 378 aaKnown RBP11.69□□□□□ -0.54
DDX41-207ENST00000507900 ZC2HC1BQ5TFG8 222 aa11.69□□□□□ -0.54
DDX41-207ENST00000507900 FAM104AQ969W3 186 aa11.69□□□□□ -0.54
DDX41-207ENST00000507900 TIMM21Q9BVV7 248 aa11.69□□□□□ -0.54
DDX41-207ENST00000507900 COL6A5A8TX70 2615 aa11.68□□□□□ -0.54
DDX41-207ENST00000507900 FGF6P10767 208 aa11.68□□□□□ -0.54
DDX41-207ENST00000507900 MRPS16Q9Y3D3 137 aaKnown RBP11.68□□□□□ -0.54
DDX41-207ENST00000507900 LOC100131303A0A0U1RQF7 123 aa11.67□□□□□ -0.54
DDX41-207ENST00000507900 NTM-AS1Q6ZSK4 140 aa11.67□□□□□ -0.54
DDX41-207ENST00000507900 AMELXQ99217 191 aa11.67□□□□□ -0.54
DDX41-207ENST00000507900 OPRPNQ99935 248 aaPredicted RBP11.67□□□□□ -0.54
DDX41-207ENST00000507900 DLEU1O43261 78 aa11.67□□□□□ -0.54
DDX41-207ENST00000507900 SBSPONQ8IVN8 264 aa11.67□□□□□ -0.54
DDX41-207ENST00000507900 PRO0255Q9UI72 69 aa11.67□□□□□ -0.54
DDX41-207ENST00000507900 PKD1L1Q8TDX9 2849 aa11.66□□□□□ -0.54
DDX41-207ENST00000507900 DNAH3Q8TD57 4116 aa11.66□□□□□ -0.54
DDX41-207ENST00000507900 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.66□□□□□ -0.54
DDX41-207ENST00000507900 TEX48A0A1B0GUV7 120 aa11.66□□□□□ -0.54
DDX41-207ENST00000507900 IGKV2-29A2NJV5 120 aaPredicted RBP11.66□□□□□ -0.54
DDX41-207ENST00000507900 DEFB4AO15263 64 aa11.66□□□□□ -0.54
DDX41-207ENST00000507900 SPART-AS1P0CW21 52 aa11.66□□□□□ -0.54
DDX41-207ENST00000507900 MRPS36P82909 103 aaKnown RBP11.66□□□□□ -0.54
DDX41-207ENST00000507900 NFE4Q86UQ8 179 aa11.66□□□□□ -0.54
DDX41-207ENST00000507900 BOD1L2Q8IYS8 172 aa11.66□□□□□ -0.54
DDX41-207ENST00000507900 VCX2Q9H322 139 aa11.66□□□□□ -0.54
DDX41-207ENST00000507900 ANK2Q01484 3957 aa11.66□□□□□ -0.54
DDX41-207ENST00000507900 DAD1P61803 113 aa11.65□□□□□ -0.54
DDX41-207ENST00000507900 CTAG1AP78358 180 aa11.65□□□□□ -0.54
DDX41-207ENST00000507900 CELA1Q9UNI1 258 aa11.65□□□□□ -0.54
DDX41-207ENST00000507900 IGKV2D-26A0A0A0MRZ7 120 aa11.64□□□□□ -0.55
DDX41-207ENST00000507900 C11orf86A6NJI1 115 aa11.64□□□□□ -0.55
DDX41-207ENST00000507900 TP73-AS1Q9UF72 201 aa11.64□□□□□ -0.55
DDX41-207ENST00000507900 CSDC2Q9Y534 153 aaKnown RBP11.64□□□□□ -0.55
DDX41-207ENST00000507900 M0R143 59 aa11.63□□□□□ -0.55
DDX41-207ENST00000507900 NMUP48645 174 aa11.63□□□□□ -0.55
DDX41-207ENST00000507900 LBHQ53QV2 105 aaPredicted RBP11.63□□□□□ -0.55
DDX41-207ENST00000507900 TMEM97Q5BJF2 176 aa11.63□□□□□ -0.55
DDX41-207ENST00000507900 CEMP1Q6PRD7 247 aaPredicted RBP11.63□□□□□ -0.55
DDX41-207ENST00000507900 SNHG12Q9BXW3 62 aa11.63□□□□□ -0.55
DDX41-207ENST00000507900 NBEAL2Q6ZNJ1 2754 aa11.63□□□□□ -0.55
DDX41-207ENST00000507900 H7C423 109 aa11.62□□□□□ -0.55
DDX41-207ENST00000507900 ATP5G1P05496 136 aa11.62□□□□□ -0.55
DDX41-207ENST00000507900 SMAGPQ0VAQ4 97 aa11.62□□□□□ -0.55
DDX41-207ENST00000507900 E9PLD3 99 aa11.62□□□□□ -0.55
DDX41-207ENST00000507900 EREGO14944 169 aa11.62□□□□□ -0.55
DDX41-207ENST00000507900 KPRPQ5T749 579 aaPredicted RBP11.62□□□□□ -0.55
DDX41-207ENST00000507900 C2orf91Q6ZV80 131 aa11.62□□□□□ -0.55
DDX41-207ENST00000507900 PCP2Q8IVA1 136 aa11.62□□□□□ -0.55
DDX41-207ENST00000507900 TMEM243Q9BU79 118 aa11.62□□□□□ -0.55
DDX41-207ENST00000507900 TRBV25-1A0A075B6N4 114 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms